RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 TRAV41A0A0B4J266 112 aa16.68■□□□□ 0.26
PKP3-211ENST00000534401 MEIS3P1A6NDR6 274 aa16.68■□□□□ 0.26
PKP3-211ENST00000534401 SLC25A17O43808 307 aa16.68■□□□□ 0.26
PKP3-211ENST00000534401 RPLP1P05386 114 aaKnown RBP16.68■□□□□ 0.26
PKP3-211ENST00000534401 DYRK1AQ13627 763 aa16.68■□□□□ 0.26
PKP3-211ENST00000534401 CXorf66Q5JRM2 361 aaPredicted RBP16.68■□□□□ 0.26
PKP3-211ENST00000534401 KPRPQ5T749 579 aaPredicted RBP16.68■□□□□ 0.26
PKP3-211ENST00000534401 ZNF66Q6ZN08 573 aa16.68■□□□□ 0.26
PKP3-211ENST00000534401 C18orf65Q6ZTR6 163 aa16.68■□□□□ 0.26
PKP3-211ENST00000534401 PPP1R27Q86WC6 154 aa16.68■□□□□ 0.26
PKP3-211ENST00000534401 ZBTB34Q8NCN2 500 aa16.68■□□□□ 0.26
PKP3-211ENST00000534401 OSR1Q8TAX0 266 aaPredicted RBP16.68■□□□□ 0.26
PKP3-211ENST00000534401 DYNC2LI1Q8TCX1 351 aa16.68■□□□□ 0.26
PKP3-211ENST00000534401 IFT46Q9NQC8 304 aa16.68■□□□□ 0.26
PKP3-211ENST00000534401 PARP11Q9NR21 331 aa16.68■□□□□ 0.26
PKP3-211ENST00000534401 TPSG1Q9NRR2 321 aa16.68■□□□□ 0.26
PKP3-211ENST00000534401 WSB1Q9Y6I7 421 aa16.68■□□□□ 0.26
PKP3-211ENST00000534401 J3QRK9 145 aa16.67■□□□□ 0.26
PKP3-211ENST00000534401 AKIRIN2Q53H80 203 aa16.67■□□□□ 0.26
PKP3-211ENST00000534401 ZNF695Q8IW36 515 aa16.67■□□□□ 0.26
PKP3-211ENST00000534401 TCTEX1D1Q8N7M0 179 aa16.67■□□□□ 0.26
PKP3-211ENST00000534401 TEX45Q8NA69 505 aa16.67■□□□□ 0.26
PKP3-211ENST00000534401 HARBI1Q96MB7 349 aa16.67■□□□□ 0.26
PKP3-211ENST00000534401 P2RX4Q99571 388 aa16.67■□□□□ 0.26
PKP3-211ENST00000534401 MIXL1Q9H2W2 232 aa16.67■□□□□ 0.26
PKP3-211ENST00000534401 ARPC1BO15143 372 aaKnown RBP16.66■□□□□ 0.26
PKP3-211ENST00000534401 SHOXO15266 292 aa16.66■□□□□ 0.26
PKP3-211ENST00000534401 SOX15O60248 233 aa16.66■□□□□ 0.26
PKP3-211ENST00000534401 CA2P00918 260 aa16.66■□□□□ 0.26
PKP3-211ENST00000534401 FCER2P06734 321 aa16.66■□□□□ 0.26
PKP3-211ENST00000534401 TAS2R46P59540 309 aa16.66■□□□□ 0.26
PKP3-211ENST00000534401 UBE2KP61086 200 aa16.66■□□□□ 0.26
PKP3-211ENST00000534401 CBX3Q13185 183 aa16.66■□□□□ 0.26
PKP3-211ENST00000534401 PLGLAQ15195 96 aa16.66■□□□□ 0.26
PKP3-211ENST00000534401 LCNL1Q6ZST4 164 aa16.66■□□□□ 0.26
PKP3-211ENST00000534401 MFSD4AQ8N468 514 aa16.66■□□□□ 0.26
PKP3-211ENST00000534401 KLK15Q9H2R5 256 aa16.66■□□□□ 0.26
PKP3-211ENST00000534401 CCL28Q9NRJ3 127 aa16.66■□□□□ 0.26
PKP3-211ENST00000534401 PRELID3BQ9Y3B1 194 aa16.66■□□□□ 0.26
PKP3-211ENST00000534401 CRYZL1O95825 349 aa16.65■□□□□ 0.26
PKP3-211ENST00000534401 PF4V1P10720 104 aa16.65■□□□□ 0.26
PKP3-211ENST00000534401 MYCNOSP40205 109 aa16.65■□□□□ 0.26
PKP3-211ENST00000534401 RFX2P48378 723 aa16.65■□□□□ 0.26
PKP3-211ENST00000534401 PJVKQ0ZLH3 352 aa16.65■□□□□ 0.26
PKP3-211ENST00000534401 KCTD9Q7L273 389 aa16.65■□□□□ 0.26
PKP3-211ENST00000534401 LINC00482Q8N8I6 264 aa16.65■□□□□ 0.26
PKP3-211ENST00000534401 CCDC59Q9P031 241 aaKnown RBP16.65■□□□□ 0.26
PKP3-211ENST00000534401 MRPS7Q9Y2R9 242 aaKnown RBP16.65■□□□□ 0.26
PKP3-211ENST00000534401 RUNX1Q01196 453 aa16.64■□□□□ 0.25
PKP3-211ENST00000534401 TMEM267Q0VDI3 215 aaPredicted RBP16.64■□□□□ 0.25
PKP3-211ENST00000534401 BEAN1Q3B7T3 259 aa16.64■□□□□ 0.25
PKP3-211ENST00000534401 KHDC1LQ5JSQ8 128 aa16.64■□□□□ 0.25
PKP3-211ENST00000534401 ZNF491Q8N8L2 437 aa16.64■□□□□ 0.25
PKP3-211ENST00000534401 SECTM1Q8WVN6 248 aa16.64■□□□□ 0.25
PKP3-211ENST00000534401 MOB3AQ96BX8 217 aa16.64■□□□□ 0.25
PKP3-211ENST00000534401 UBE2E2Q96LR5 201 aa16.64■□□□□ 0.25
PKP3-211ENST00000534401 CLCC1Q96S66 551 aa16.64■□□□□ 0.25
PKP3-211ENST00000534401 SLC5A7Q9GZV3 580 aa16.64■□□□□ 0.25
PKP3-211ENST00000534401 EHFQ9NZC4 300 aa16.64■□□□□ 0.25
PKP3-211ENST00000534401 G3V4G9 280 aa16.63■□□□□ 0.25
PKP3-211ENST00000534401 H3BMQ9 156 aa16.63■□□□□ 0.25
PKP3-211ENST00000534401 CTDSP2O14595 271 aa16.63■□□□□ 0.25
PKP3-211ENST00000534401 FCGR3BO75015 233 aa16.63■□□□□ 0.25
PKP3-211ENST00000534401 GNRHRP30968 328 aa16.63■□□□□ 0.25
PKP3-211ENST00000534401 RCVRNP35243 200 aa16.63■□□□□ 0.25
PKP3-211ENST00000534401 RAB9AP51151 201 aa16.63■□□□□ 0.25
PKP3-211ENST00000534401 FXYD3Q14802 87 aa16.63■□□□□ 0.25
PKP3-211ENST00000534401 C8orf86Q6ZUL3 223 aa16.63■□□□□ 0.25
PKP3-211ENST00000534401 SNX29P2Q8IUI4 249 aa16.63■□□□□ 0.25
PKP3-211ENST00000534401 MRPL41Q8IXM3 137 aaKnown RBP16.63■□□□□ 0.25
PKP3-211ENST00000534401 KLHL30-AS1Q8NEE0 82 aa16.63■□□□□ 0.25
PKP3-211ENST00000534401 OR5H2Q8NGV7 314 aa16.63■□□□□ 0.25
PKP3-211ENST00000534401 ARPC1AQ92747 370 aa16.63■□□□□ 0.25
PKP3-211ENST00000534401 ISOC1Q96CN7 298 aa16.63■□□□□ 0.25
PKP3-211ENST00000534401 ABHD1Q96SE0 405 aa16.63■□□□□ 0.25
PKP3-211ENST00000534401 FOXA2Q9Y261 457 aaPredicted RBP16.63■□□□□ 0.25
PKP3-211ENST00000534401 CEPT1Q9Y6K0 416 aa16.63■□□□□ 0.25
PKP3-211ENST00000534401 FAM25AB3EWG3 89 aa16.62■□□□□ 0.25
PKP3-211ENST00000534401 FAM25CB3EWG5 89 aa16.62■□□□□ 0.25
PKP3-211ENST00000534401 FAM25GB3EWG6 89 aa16.62■□□□□ 0.25
PKP3-211ENST00000534401 RBFOX2O43251 390 aaKnown RBP eCLIP16.62■□□□□ 0.25
PKP3-211ENST00000534401 BRI3O95415 125 aa16.62■□□□□ 0.25
PKP3-211ENST00000534401 PMP2P02689 132 aa16.62■□□□□ 0.25
PKP3-211ENST00000534401 PRSS8Q16651 343 aa16.62■□□□□ 0.25
PKP3-211ENST00000534401 VMA21Q3ZAQ7 101 aa16.62■□□□□ 0.25
PKP3-211ENST00000534401 ZNF818PQ6ZRF7 136 aa16.62■□□□□ 0.25
PKP3-211ENST00000534401 OR5M8Q8NGP6 311 aa16.62■□□□□ 0.25
PKP3-211ENST00000534401 C4orf3Q8WVX3 66 aa16.62■□□□□ 0.25
PKP3-211ENST00000534401 RAX2Q96IS3 184 aa16.62■□□□□ 0.25
PKP3-211ENST00000534401 EXTL2Q9UBQ6 330 aa16.62■□□□□ 0.25
PKP3-211ENST00000534401 I3L521 148 aa16.61■□□□□ 0.25
PKP3-211ENST00000534401 PF4P02776 101 aa16.61■□□□□ 0.25
PKP3-211ENST00000534401 HRH1P35367 487 aa16.61■□□□□ 0.25
PKP3-211ENST00000534401 KIR2DS2P43631 304 aa16.61■□□□□ 0.25
PKP3-211ENST00000534401 DEFA6Q01524 100 aa16.61■□□□□ 0.25
PKP3-211ENST00000534401 PUSL1Q8N0Z8 303 aaKnown RBP16.61■□□□□ 0.25
PKP3-211ENST00000534401 LFNGQ8NES3 379 aa16.61■□□□□ 0.25
PKP3-211ENST00000534401 OR4S2Q8NH73 311 aa16.61■□□□□ 0.25
PKP3-211ENST00000534401 C15orf40Q8WUR7 153 aa16.61■□□□□ 0.25
PKP3-211ENST00000534401 TCTEX1D2Q8WW35 142 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms