RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 GALP22466 123 aa7.41□□□□□ -1.22
SSBP3-215ENST00000533946 MC5RP33032 325 aa7.41□□□□□ -1.22
SSBP3-215ENST00000533946 ECI1P42126 302 aa7.41□□□□□ -1.22
SSBP3-215ENST00000533946 PSMD7P51665 324 aa7.41□□□□□ -1.22
SSBP3-215ENST00000533946 ACTBL2Q562R1 376 aa7.41□□□□□ -1.22
SSBP3-215ENST00000533946 ZNF562Q6V9R5 426 aa7.41□□□□□ -1.22
SSBP3-215ENST00000533946 REC114Q7Z4M0 266 aa7.41□□□□□ -1.22
SSBP3-215ENST00000533946 ARPC1AQ92747 370 aa7.41□□□□□ -1.22
SSBP3-215ENST00000533946 SNAPC3Q92966 411 aa7.41□□□□□ -1.22
SSBP3-215ENST00000533946 FLYWCH2Q96CP2 140 aaKnown RBP7.41□□□□□ -1.22
SSBP3-215ENST00000533946 YTHDF1Q9BYJ9 559 aaKnown RBP7.41□□□□□ -1.22
SSBP3-215ENST00000533946 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.41□□□□□ -1.224e-7■■■■■ 27
SSBP3-215ENST00000533946 VSIG4Q9Y279 399 aa7.41□□□□□ -1.22
SSBP3-215ENST00000533946 HMX3A6NHT5 357 aa7.4□□□□□ -1.22
SSBP3-215ENST00000533946 TNFSF12O43508 249 aa7.4□□□□□ -1.22
SSBP3-215ENST00000533946 TUSC2O75896 110 aa7.4□□□□□ -1.22
SSBP3-215ENST00000533946 HLA-DQB1P01920 261 aa7.4□□□□□ -1.22
SSBP3-215ENST00000533946 AADACP22760 399 aa7.4□□□□□ -1.22
SSBP3-215ENST00000533946 TALDO1P37837 337 aa7.4□□□□□ -1.22
SSBP3-215ENST00000533946 TPPP2P59282 170 aa7.4□□□□□ -1.22
SSBP3-215ENST00000533946 RUNX1Q01196 453 aa7.4□□□□□ -1.22
SSBP3-215ENST00000533946 ZNF45Q02386 682 aa7.4□□□□□ -1.22
SSBP3-215ENST00000533946 KCTD21Q4G0X4 260 aa7.4□□□□□ -1.22
SSBP3-215ENST00000533946 TMEM177Q53S58 311 aa7.4□□□□□ -1.22
SSBP3-215ENST00000533946 TMEM65Q6PI78 240 aa7.4□□□□□ -1.22
SSBP3-215ENST00000533946 Q6ZS49 121 aa7.4□□□□□ -1.22
SSBP3-215ENST00000533946 PDPNQ86YL7 162 aa7.4□□□□□ -1.22
SSBP3-215ENST00000533946 RHOVQ96L33 236 aa7.4□□□□□ -1.22
SSBP3-215ENST00000533946 HARBI1Q96MB7 349 aa7.4□□□□□ -1.22
SSBP3-215ENST00000533946 GINS4Q9BRT9 223 aa7.4□□□□□ -1.22
SSBP3-215ENST00000533946 CCL28Q9NRJ3 127 aa7.4□□□□□ -1.22
SSBP3-215ENST00000533946 S4R3C0 116 aa7.4□□□□□ -1.22
SSBP3-215ENST00000533946 CSMD3Q7Z407 3707 aa7.4□□□□□ -1.23
SSBP3-215ENST00000533946 STARD9Q9P2P6 4700 aa7.4□□□□□ -1.23
SSBP3-215ENST00000533946 TRAV3A0A0B4J244 114 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 METTL21EPA6NDL7 271 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 MSGN1A6NI15 193 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 CGB1A6NKQ9 187 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 TRIM64CA6NLI5 447 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 SHOXO15266 292 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 RAMP3O60896 148 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 FCGR3BO75015 233 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 TRGV3P03979 118 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 LGALS1P09382 135 aaKnown RBP7.39□□□□□ -1.23
SSBP3-215ENST00000533946 SMIM18P0DKX4 95 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 SPNP16150 400 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 DTYMKP23919 212 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 NCS1P62166 190 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 DGCR2P98153 550 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 ZNF616Q08AN1 781 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 DYRK1AQ13627 763 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 AKIRIN2Q53H80 203 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 IL34Q6ZMJ4 242 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 TPRA1Q86W33 373 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 OR5M8Q8NGP6 311 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 FCGR1BQ92637 280 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 TSNAXQ99598 290 aaKnown RBP7.39□□□□□ -1.23
SSBP3-215ENST00000533946 GON7Q9BXV9 100 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 TINAGL1Q9GZM7 467 aaPredicted RBP7.39□□□□□ -1.23
SSBP3-215ENST00000533946 AUNIPQ9H7T9 357 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 ZNF430Q9H8G1 570 aaPredicted RBP7.39□□□□□ -1.23
SSBP3-215ENST00000533946 TAS2R8Q9NYW2 309 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 ANXA10Q9UJ72 324 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 MGAT4AQ9UM21 535 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 OR2W1Q9Y3N9 320 aa7.39□□□□□ -1.23
SSBP3-215ENST00000533946 IZUMO1RA6ND01 250 aa7.38□□□□□ -1.23
SSBP3-215ENST00000533946 OVOL1O14753 267 aa7.38□□□□□ -1.23
SSBP3-215ENST00000533946 RBBP9O75884 186 aa7.38□□□□□ -1.23
SSBP3-215ENST00000533946 CNIH1O95406 144 aa7.38□□□□□ -1.23
SSBP3-215ENST00000533946 APOA2P02652 100 aa7.38□□□□□ -1.23
SSBP3-215ENST00000533946 EIF4EP06730 217 aaKnown RBP7.38□□□□□ -1.23
SSBP3-215ENST00000533946 IL6RP08887 468 aaPredicted RBP7.38□□□□□ -1.23
SSBP3-215ENST00000533946 SAA1P0DJI8 122 aaPredicted RBP7.38□□□□□ -1.23
SSBP3-215ENST00000533946 RPA2P15927 270 aa7.38□□□□□ -1.23
SSBP3-215ENST00000533946 SERPINB10P48595 397 aa7.38□□□□□ -1.23
SSBP3-215ENST00000533946 GNG2P59768 71 aa7.38□□□□□ -1.23
SSBP3-215ENST00000533946 MRPS15P82914 257 aaKnown RBP7.38□□□□□ -1.23
SSBP3-215ENST00000533946 PRSS8Q16651 343 aa7.38□□□□□ -1.23
SSBP3-215ENST00000533946 ADAMTSL5Q6ZMM2 481 aa7.38□□□□□ -1.23
SSBP3-215ENST00000533946 OVCH2Q7RTZ1 564 aa7.38□□□□□ -1.23
SSBP3-215ENST00000533946 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.38□□□□□ -1.23
SSBP3-215ENST00000533946 TSPAN14Q8NG11 270 aa7.38□□□□□ -1.23
SSBP3-215ENST00000533946 Q9H521 79 aa7.38□□□□□ -1.23
SSBP3-215ENST00000533946 ZNF355PQ9NSJ1 428 aa7.38□□□□□ -1.23
SSBP3-215ENST00000533946 RBMX2Q9Y388 322 aaKnown RBP7.38□□□□□ -1.23
SSBP3-215ENST00000533946 RBM7Q9Y580 266 aaKnown RBP7.38□□□□□ -1.23
SSBP3-215ENST00000533946 TEX22C9J3V5 150 aa7.37□□□□□ -1.23
SSBP3-215ENST00000533946 LINC01619G3V211 115 aa7.37□□□□□ -1.23
SSBP3-215ENST00000533946 AIREO43918 545 aa7.37□□□□□ -1.23
SSBP3-215ENST00000533946 DUS4LO95620 317 aaKnown RBP7.37□□□□□ -1.23
SSBP3-215ENST00000533946 IGHV3-23P01764 117 aa7.37□□□□□ -1.23
SSBP3-215ENST00000533946 HLA-AP01891 365 aaKnown RBP7.37□□□□□ -1.23
SSBP3-215ENST00000533946 OR5H8P0DN80 308 aa7.37□□□□□ -1.23
SSBP3-215ENST00000533946 SLC6A1P30531 599 aa7.37□□□□□ -1.23
SSBP3-215ENST00000533946 FCGR2CP31995 323 aa7.37□□□□□ -1.23
SSBP3-215ENST00000533946 RFX2P48378 723 aa7.37□□□□□ -1.23
SSBP3-215ENST00000533946 UBE2KP61086 200 aa7.37□□□□□ -1.23
SSBP3-215ENST00000533946 VBP1P61758 197 aa7.37□□□□□ -1.23
SSBP3-215ENST00000533946 TNXAQ16473 311 aa7.37□□□□□ -1.23
SSBP3-215ENST00000533946 SRSF7Q16629 238 aaKnown RBP eCLIP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms