RNA–Protein interactions for RNA: ENST00000533644.5

BBS1-223, Transcript of Bardet-Biedl syndrome 1, human

TSL 3

Gene BBS1, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-223	ENST00000533644	CBX3	Q13185	183 aa		13.71	□□□□□ -0.21
BBS1-223	ENST00000533644	FXYD3	Q14802	87 aa		13.71	□□□□□ -0.21
BBS1-223	ENST00000533644	ZNF645	Q8N7E2	425 aa		13.71	□□□□□ -0.21
BBS1-223	ENST00000533644	LFNG	Q8NES3	379 aa		13.71	□□□□□ -0.21
BBS1-223	ENST00000533644	TSPAN14	Q8NG11	270 aa		13.71	□□□□□ -0.21
BBS1-223	ENST00000533644	CASTOR1	Q8WTX7	329 aa		13.71	□□□□□ -0.21
BBS1-223	ENST00000533644	YIPF6	Q96EC8	236 aa		13.71	□□□□□ -0.21
BBS1-223	ENST00000533644	OR5B12	Q96R08	314 aa		13.71	□□□□□ -0.21
BBS1-223	ENST00000533644	ZMAT5	Q9UDW3	170 aa	Known RBP	13.71	□□□□□ -0.21
BBS1-223	ENST00000533644	TRAV18	A0A075B6X5	111 aa		13.7	□□□□□ -0.22
BBS1-223	ENST00000533644	SRRM4	A7MD48	611 aa	Known RBP	13.7	□□□□□ -0.22
BBS1-223	ENST00000533644	LINC00473	A8K010	186 aa		13.7	□□□□□ -0.22
BBS1-223	ENST00000533644	LGALS1	P09382	135 aa	Known RBP	13.7	□□□□□ -0.22
BBS1-223	ENST00000533644	NFYA	P23511	347 aa	Predicted RBP	13.7	□□□□□ -0.22
BBS1-223	ENST00000533644	DGCR2	P98153	550 aa		13.7	□□□□□ -0.22
BBS1-223	ENST00000533644	PJVK	Q0ZLH3	352 aa		13.7	□□□□□ -0.22
BBS1-223	ENST00000533644	MRGPRG-AS1	Q2M3A8	158 aa		13.7	□□□□□ -0.22
BBS1-223	ENST00000533644	C9orf66	Q5T8R8	295 aa		13.7	□□□□□ -0.22
BBS1-223	ENST00000533644	GRPEL2	Q8TAA5	225 aa		13.7	□□□□□ -0.22
BBS1-223	ENST00000533644	VCX3A	Q9NNX9	186 aa		13.7	□□□□□ -0.22
BBS1-223	ENST00000533644	SPATA2	Q9UM82	520 aa		13.7	□□□□□ -0.22
BBS1-223	ENST00000533644	RYR3	Q15413	4870 aa		13.69	□□□□□ -0.22
BBS1-223	ENST00000533644	IGKV1D-13	A0A0B4J2D9	117 aa		13.69	□□□□□ -0.22
BBS1-223	ENST00000533644	TRIM64C	A6NLI5	447 aa		13.69	□□□□□ -0.22
BBS1-223	ENST00000533644	SEC14L6	B5MCN3	397 aa		13.69	□□□□□ -0.22
BBS1-223	ENST00000533644	SHOX	O15266	292 aa		13.69	□□□□□ -0.22
BBS1-223	ENST00000533644	AIRE	O43918	545 aa		13.69	□□□□□ -0.22
BBS1-223	ENST00000533644	TUSC2	O75896	110 aa		13.69	□□□□□ -0.22
BBS1-223	ENST00000533644	IGLV2-14	P01704	120 aa		13.69	□□□□□ -0.22
BBS1-223	ENST00000533644	IGKV1-13	P0DP09	117 aa		13.69	□□□□□ -0.22
BBS1-223	ENST00000533644	TGFBR1	P36897	503 aa		13.69	□□□□□ -0.22
BBS1-223	ENST00000533644	CROCCP3	Q8IVE0	287 aa		13.69	□□□□□ -0.22
BBS1-223	ENST00000533644	ALX4	Q9H161	411 aa	Predicted RBP	13.69	□□□□□ -0.22
BBS1-223	ENST00000533644	SLA2	Q9H6Q3	261 aa		13.69	□□□□□ -0.22
BBS1-223	ENST00000533644	AUNIP	Q9H7T9	357 aa		13.69	□□□□□ -0.22
BBS1-223	ENST00000533644	SCOC	Q9UIL1	159 aa		13.69	□□□□□ -0.22
BBS1-223	ENST00000533644	RBMX2	Q9Y388	322 aa	Known RBP	13.69	□□□□□ -0.22
BBS1-223	ENST00000533644	RAMP3	O60896	148 aa		13.68	□□□□□ -0.22
BBS1-223	ENST00000533644	SLC22A5	O76082	557 aa		13.68	□□□□□ -0.22
BBS1-223	ENST00000533644	CRYZL1	O95825	349 aa		13.68	□□□□□ -0.22
BBS1-223	ENST00000533644	UBE2K	P61086	200 aa		13.68	□□□□□ -0.22
BBS1-223	ENST00000533644	OVCH2	Q7RTZ1	564 aa		13.68	□□□□□ -0.22
BBS1-223	ENST00000533644	HOGA1	Q86XE5	327 aa		13.68	□□□□□ -0.22
BBS1-223	ENST00000533644	OSR1	Q8TAX0	266 aa	Predicted RBP	13.68	□□□□□ -0.22
BBS1-223	ENST00000533644		H3BUA1	57 aa		13.67	□□□□□ -0.22
BBS1-223	ENST00000533644		J3QRK9	145 aa		13.67	□□□□□ -0.22
BBS1-223	ENST00000533644	CNIH1	O95406	144 aa		13.67	□□□□□ -0.22
BBS1-223	ENST00000533644	BRI3	O95415	125 aa		13.67	□□□□□ -0.22
BBS1-223	ENST00000533644	RPS19	P39019	145 aa	Known RBP	13.67	□□□□□ -0.22
BBS1-223	ENST00000533644	TPPP2	P59282	170 aa		13.67	□□□□□ -0.22
BBS1-223	ENST00000533644	EIF4EBP1	Q13541	118 aa	Predicted RBP	13.67	□□□□□ -0.22
BBS1-223	ENST00000533644	VMA21	Q3ZAQ7	101 aa		13.67	□□□□□ -0.22
BBS1-223	ENST00000533644	TEX45	Q8NA69	505 aa		13.67	□□□□□ -0.22
BBS1-223	ENST00000533644	POC5	Q8NA72	575 aa		13.67	□□□□□ -0.22
BBS1-223	ENST00000533644	BEST4	Q8NFU0	473 aa		13.67	□□□□□ -0.22
BBS1-223	ENST00000533644	RHOV	Q96L33	236 aa		13.67	□□□□□ -0.22
BBS1-223	ENST00000533644	TMEM68	Q96MH6	324 aa		13.67	□□□□□ -0.22
BBS1-223	ENST00000533644	DIABLO	Q9NR28	239 aa		13.67	□□□□□ -0.22
BBS1-223	ENST00000533644	CD40LG	P29965	261 aa		13.66	□□□□□ -0.22
BBS1-223	ENST00000533644	RPL30	P62888	115 aa	Known RBP	13.66	□□□□□ -0.22
BBS1-223	ENST00000533644	PRSS8	Q16651	343 aa		13.66	□□□□□ -0.22
BBS1-223	ENST00000533644	KCTD9	Q7L273	389 aa		13.66	□□□□□ -0.22
BBS1-223	ENST00000533644	GVQW1	Q8N7I0	195 aa		13.66	□□□□□ -0.22
BBS1-223	ENST00000533644	DCUN1D4	Q92564	292 aa		13.66	□□□□□ -0.22
BBS1-223	ENST00000533644	MS4A10	Q96PG2	267 aa		13.66	□□□□□ -0.22
BBS1-223	ENST00000533644	IGHV4OR15-8	A0A075B7B6	117 aa		13.65	□□□□□ -0.22
BBS1-223	ENST00000533644		A0A087WW49	117 aa		13.65	□□□□□ -0.22
BBS1-223	ENST00000533644	LINC01619	G3V211	115 aa		13.65	□□□□□ -0.22
BBS1-223	ENST00000533644	XRCC3	O43542	346 aa		13.65	□□□□□ -0.22
BBS1-223	ENST00000533644	FCGR3B	O75015	233 aa		13.65	□□□□□ -0.22
BBS1-223	ENST00000533644	IGHV3-11	P01762	117 aa		13.65	□□□□□ -0.22
BBS1-223	ENST00000533644	TRGV3	P03979	118 aa		13.65	□□□□□ -0.22
BBS1-223	ENST00000533644	INSL3	P51460	131 aa		13.65	□□□□□ -0.22
BBS1-223	ENST00000533644	ARPC4	P59998	168 aa		13.65	□□□□□ -0.22
BBS1-223	ENST00000533644	DCTN2	Q13561	401 aa	Known RBP	13.65	□□□□□ -0.22
BBS1-223	ENST00000533644	MSMO1	Q15800	293 aa		13.65	□□□□□ -0.22
BBS1-223	ENST00000533644	DEFB121	Q5J5C9	76 aa		13.65	□□□□□ -0.22
BBS1-223	ENST00000533644	HSD17B10	Q99714	261 aa	Known RBP	13.65	□□□□□ -0.22
BBS1-223	ENST00000533644	PRELID3B	Q9Y3B1	194 aa		13.65	□□□□□ -0.22
BBS1-223	ENST00000533644	OVOL1	O14753	267 aa		13.64	□□□□□ -0.23
BBS1-223	ENST00000533644	SAA1	P0DJI8	122 aa	Predicted RBP	13.64	□□□□□ -0.23
BBS1-223	ENST00000533644	PTHLH	P12272	177 aa		13.64	□□□□□ -0.23
BBS1-223	ENST00000533644	CBX5	P45973	191 aa		13.64	□□□□□ -0.23
BBS1-223	ENST00000533644	SLURP1	P55000	103 aa		13.64	□□□□□ -0.23
BBS1-223	ENST00000533644	LSM3	P62310	102 aa	Known RBP	13.64	□□□□□ -0.23
BBS1-223	ENST00000533644	UBE2NL	Q5JXB2	153 aa		13.64	□□□□□ -0.23
BBS1-223	ENST00000533644	IDO2	Q6ZQW0	420 aa		13.64	□□□□□ -0.23
BBS1-223	ENST00000533644	OR5T1	Q8NG75	326 aa		13.64	□□□□□ -0.23
BBS1-223	ENST00000533644	SNAPC3	Q92966	411 aa		13.64	□□□□□ -0.23
BBS1-223	ENST00000533644	DLX4	Q92988	240 aa	Predicted RBP	13.64	□□□□□ -0.23
BBS1-223	ENST00000533644	MRPS7	Q9Y2R9	242 aa	Known RBP	13.64	□□□□□ -0.23
BBS1-223	ENST00000533644	TNC	P24821	2201 aa		13.63	□□□□□ -0.23
BBS1-223	ENST00000533644	COL7A1	Q02388	2944 aa		13.63	□□□□□ -0.23
BBS1-223	ENST00000533644	HSPB1	P04792	205 aa	Known RBP	13.63	□□□□□ -0.23
BBS1-223	ENST00000533644	AADAC	P22760	399 aa		13.63	□□□□□ -0.23
BBS1-223	ENST00000533644	FCGR2C	P31995	323 aa		13.63	□□□□□ -0.23
BBS1-223	ENST00000533644	BRWD1-AS2	P59051	145 aa		13.63	□□□□□ -0.23
BBS1-223	ENST00000533644	CDK10	Q15131	360 aa		13.63	□□□□□ -0.23
BBS1-223	ENST00000533644	OR13F1	Q8NGS4	319 aa		13.63	□□□□□ -0.23
BBS1-223	ENST00000533644	OR4S2	Q8NH73	311 aa		13.63	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 7 ms