RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 WASHC3Q9Y3C0 194 aa10.05□□□□□ -0.8
COPB1-208ENST00000532088 TLN2Q9Y4G6 2542 aa10.05□□□□□ -0.8
COPB1-208ENST00000532088 FAM240BA0A1B0GVZ2 78 aa10.04□□□□□ -0.8
COPB1-208ENST00000532088 CLDN34H7C241 214 aa10.04□□□□□ -0.8
COPB1-208ENST00000532088 VENTXO95231 258 aa10.04□□□□□ -0.8
COPB1-208ENST00000532088 PTTG1O95997 202 aa10.04□□□□□ -0.8
COPB1-208ENST00000532088 TCRBP04435 133 aa10.04□□□□□ -0.8
COPB1-208ENST00000532088 F2RP25116 425 aa10.04□□□□□ -0.8
COPB1-208ENST00000532088 IER3P46695 156 aa10.04□□□□□ -0.8
COPB1-208ENST00000532088 MECP2P51608 486 aaKnown RBP10.04□□□□□ -0.8
COPB1-208ENST00000532088 CCR6P51684 374 aa10.04□□□□□ -0.8
COPB1-208ENST00000532088 PIGPP57054 158 aa10.04□□□□□ -0.8
COPB1-208ENST00000532088 TAS2R31P59538 309 aa10.04□□□□□ -0.8
COPB1-208ENST00000532088 BAMBIQ13145 260 aa10.04□□□□□ -0.8
COPB1-208ENST00000532088 CBX3Q13185 183 aa10.04□□□□□ -0.8
COPB1-208ENST00000532088 RTL8BQ17RB0 113 aa10.04□□□□□ -0.8
COPB1-208ENST00000532088 C16orf82Q7Z2V1 217 aa10.04□□□□□ -0.8
COPB1-208ENST00000532088 MOB3BQ86TA1 216 aa10.04□□□□□ -0.8
COPB1-208ENST00000532088 ZNF383Q8NA42 475 aa10.04□□□□□ -0.8
COPB1-208ENST00000532088 OR8H1Q8NGG4 311 aa10.04□□□□□ -0.8
COPB1-208ENST00000532088 ZNF418Q8TF45 676 aaPredicted RBP10.04□□□□□ -0.8
COPB1-208ENST00000532088 JMJD8Q96S16 334 aa10.04□□□□□ -0.8
COPB1-208ENST00000532088 SSX3Q99909 188 aa10.04□□□□□ -0.8
COPB1-208ENST00000532088 LIN7CQ9NUP9 197 aaKnown RBP10.04□□□□□ -0.8
COPB1-208ENST00000532088 NUBP2Q9Y5Y2 271 aa10.04□□□□□ -0.8
COPB1-208ENST00000532088 PIGBOS1A0A0B4J2F0 54 aa10.03□□□□□ -0.8
COPB1-208ENST00000532088 BTBD17A6NE02 478 aa10.03□□□□□ -0.8
COPB1-208ENST00000532088 LINC00473A8K010 186 aa10.03□□□□□ -0.8
COPB1-208ENST00000532088 H3BS24 57 aa10.03□□□□□ -0.8
COPB1-208ENST00000532088 MPPED1O15442 326 aa10.03□□□□□ -0.8
COPB1-208ENST00000532088 MOSP00540 346 aa10.03□□□□□ -0.8
COPB1-208ENST00000532088 RAG2P55895 527 aa10.03□□□□□ -0.8
COPB1-208ENST00000532088 RPL30P62888 115 aaKnown RBP10.03□□□□□ -0.8
COPB1-208ENST00000532088 DHODHQ02127 395 aa10.03□□□□□ -0.8
COPB1-208ENST00000532088 PHLDA2Q53GA4 152 aa10.03□□□□□ -0.8
COPB1-208ENST00000532088 ANKRD39Q53RE8 183 aa10.03□□□□□ -0.8
COPB1-208ENST00000532088 TMEM128Q5BJH2 165 aa10.03□□□□□ -0.8
COPB1-208ENST00000532088 TBC1D26Q86UD7 250 aa10.03□□□□□ -0.8
COPB1-208ENST00000532088 SLC25A42Q86VD7 318 aa10.03□□□□□ -0.8
COPB1-208ENST00000532088 CENPSQ8N2Z9 138 aa10.03□□□□□ -0.8
COPB1-208ENST00000532088 SIGLECL1Q8N7X8 197 aa10.03□□□□□ -0.8
COPB1-208ENST00000532088 OR4C13Q8NGP0 309 aa10.03□□□□□ -0.8
COPB1-208ENST00000532088 OR2T10Q8NGZ9 312 aa10.03□□□□□ -0.8
COPB1-208ENST00000532088 ENKURQ8TC29 256 aa10.03□□□□□ -0.8
COPB1-208ENST00000532088 PIFOQ8TCI5 191 aa10.03□□□□□ -0.8
COPB1-208ENST00000532088 ZFAND2BQ8WV99 257 aa10.03□□□□□ -0.8
COPB1-208ENST00000532088 C22orf15Q8WYQ4 148 aa10.03□□□□□ -0.8
COPB1-208ENST00000532088 GALNT14Q96FL9 552 aa10.03□□□□□ -0.8
COPB1-208ENST00000532088 ALX4Q9H161 411 aaPredicted RBP10.03□□□□□ -0.8
COPB1-208ENST00000532088 SLC35D1Q9NTN3 355 aa10.03□□□□□ -0.8
COPB1-208ENST00000532088 TCF19Q9Y242 345 aa10.03□□□□□ -0.8
COPB1-208ENST00000532088 SOX21Q9Y651 276 aaPredicted RBP10.03□□□□□ -0.8
COPB1-208ENST00000532088 MDFIC2A0A1B0GVS7 189 aa10.02□□□□□ -0.81
COPB1-208ENST00000532088 A6NDX4 124 aa10.02□□□□□ -0.81
COPB1-208ENST00000532088 CRYM-AS1A6NIL9 109 aa10.02□□□□□ -0.81
COPB1-208ENST00000532088 H0Y980 276 aa10.02□□□□□ -0.81
COPB1-208ENST00000532088 RLN1P04808 185 aa10.02□□□□□ -0.81
COPB1-208ENST00000532088 SNRNP70P08621 437 aaKnown RBP10.02□□□□□ -0.81
COPB1-208ENST00000532088 RPA2P15927 270 aa10.02□□□□□ -0.81
COPB1-208ENST00000532088 LGALS7P47929 136 aa10.02□□□□□ -0.81
COPB1-208ENST00000532088 HILS1P60008 231 aa10.02□□□□□ -0.81
COPB1-208ENST00000532088 TMEM177Q53S58 311 aa10.02□□□□□ -0.81
COPB1-208ENST00000532088 CADM3Q8N126 398 aa10.02□□□□□ -0.81
COPB1-208ENST00000532088 Q8N6K4 173 aa10.02□□□□□ -0.81
COPB1-208ENST00000532088 DRAXINQ8NBI3 349 aaPredicted RBP10.02□□□□□ -0.81
COPB1-208ENST00000532088 OR4S2Q8NH73 311 aa10.02□□□□□ -0.81
COPB1-208ENST00000532088 OSR1Q8TAX0 266 aaPredicted RBP10.02□□□□□ -0.81
COPB1-208ENST00000532088 TCTEX1D2Q8WW35 142 aa10.02□□□□□ -0.81
COPB1-208ENST00000532088 AIFM2Q9BRQ8 373 aa10.02□□□□□ -0.81
COPB1-208ENST00000532088 C20orf85Q9H1P6 137 aa10.02□□□□□ -0.81
COPB1-208ENST00000532088 NAA60Q9H7X0 242 aa10.02□□□□□ -0.81
COPB1-208ENST00000532088 RAB18Q9NP72 206 aa10.02□□□□□ -0.81
COPB1-208ENST00000532088 KCNIP3Q9Y2W7 256 aa10.02□□□□□ -0.81
COPB1-208ENST00000532088 C3orf85A0A1B0GTC6 90 aa10.01□□□□□ -0.81
COPB1-208ENST00000532088 H3BUX3 64 aa10.01□□□□□ -0.81
COPB1-208ENST00000532088 TNFSF12O43508 249 aa10.01□□□□□ -0.81
COPB1-208ENST00000532088 OR2F2O95006 317 aa10.01□□□□□ -0.81
COPB1-208ENST00000532088 SPDEFO95238 335 aa10.01□□□□□ -0.81
COPB1-208ENST00000532088 HPRT1P00492 218 aa10.01□□□□□ -0.81
COPB1-208ENST00000532088 IGKV1D-33P01593 117 aa10.01□□□□□ -0.81
COPB1-208ENST00000532088 IGKV1-33P01594 117 aa10.01□□□□□ -0.81
COPB1-208ENST00000532088 ANXA3P12429 323 aa10.01□□□□□ -0.81
COPB1-208ENST00000532088 PI3P19957 117 aa10.01□□□□□ -0.81
COPB1-208ENST00000532088 RPL15P61313 204 aaKnown RBP10.01□□□□□ -0.81
COPB1-208ENST00000532088 PLET1Q6UQ28 207 aa10.01□□□□□ -0.81
COPB1-208ENST00000532088 GLDNQ6ZMI3 551 aaPredicted RBP10.01□□□□□ -0.81
COPB1-208ENST00000532088 NRARPQ7Z6K4 114 aa10.01□□□□□ -0.81
COPB1-208ENST00000532088 SGPP2Q8IWX5 399 aa10.01□□□□□ -0.81
COPB1-208ENST00000532088 SPAG16Q8N0X2 631 aa10.01□□□□□ -0.81
COPB1-208ENST00000532088 CAPSLQ8WWF8 208 aa10.01□□□□□ -0.81
COPB1-208ENST00000532088 TMEM230Q96A57 120 aa10.01□□□□□ -0.81
COPB1-208ENST00000532088 FLYWCH2Q96CP2 140 aaKnown RBP10.01□□□□□ -0.81
COPB1-208ENST00000532088 PLEKHA2Q9HB19 425 aa10.01□□□□□ -0.81
COPB1-208ENST00000532088 COMMD9Q9P000 198 aa10.01□□□□□ -0.81
COPB1-208ENST00000532088 VPREB3Q9UKI3 123 aa10.01□□□□□ -0.81
COPB1-208ENST00000532088 SONP18583 2426 aaKnown RBP10.01□□□□□ -0.81
COPB1-208ENST00000532088 IGHV3-72A0A0B4J1Y9 119 aa10□□□□□ -0.81
COPB1-208ENST00000532088 TEX13DA0A0J9YY54 714 aaPredicted RBP10□□□□□ -0.81
COPB1-208ENST00000532088 H7C2Y5 167 aa10□□□□□ -0.81
COPB1-208ENST00000532088 M0QZK8 103 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms