RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 DRAXINQ8NBI3 349 aaPredicted RBP11.51□□□□□ -0.57
CPSF1-206ENST00000531480 ZBTB34Q8NCN2 500 aa11.51□□□□□ -0.57
CPSF1-206ENST00000531480 NPBQ8NG41 125 aa11.51□□□□□ -0.57
CPSF1-206ENST00000531480 ZNF2Q9BSG1 426 aaPredicted RBP11.51□□□□□ -0.57
CPSF1-206ENST00000531480 GPN1Q9HCN4 374 aaPredicted RBP11.51□□□□□ -0.57
CPSF1-206ENST00000531480 WASHC3Q9Y3C0 194 aa11.51□□□□□ -0.57
CPSF1-206ENST00000531480 RBM7Q9Y580 266 aaKnown RBP11.51□□□□□ -0.57
CPSF1-206ENST00000531480 CLPSL1A2RUU4 121 aa11.5□□□□□ -0.57
CPSF1-206ENST00000531480 LINC00473A8K010 186 aa11.5□□□□□ -0.57
CPSF1-206ENST00000531480 NDUFA3O95167 84 aa11.5□□□□□ -0.57
CPSF1-206ENST00000531480 TCRBP04435 133 aa11.5□□□□□ -0.57
CPSF1-206ENST00000531480 GNRHRP30968 328 aa11.5□□□□□ -0.57
CPSF1-206ENST00000531480 F2RL1P55085 397 aa11.5□□□□□ -0.57
CPSF1-206ENST00000531480 UCP3P55916 312 aa11.5□□□□□ -0.57
CPSF1-206ENST00000531480 HES1Q14469 280 aa11.5□□□□□ -0.57
CPSF1-206ENST00000531480 SURF2Q15527 256 aaPredicted RBP11.5□□□□□ -0.57
CPSF1-206ENST00000531480 AWAT1Q58HT5 328 aa11.5□□□□□ -0.57
CPSF1-206ENST00000531480 AADACL3Q5VUY0 350 aa11.5□□□□□ -0.57
CPSF1-206ENST00000531480 GLDNQ6ZMI3 551 aaPredicted RBP11.5□□□□□ -0.57
CPSF1-206ENST00000531480 BVESQ8NE79 360 aa11.5□□□□□ -0.57
CPSF1-206ENST00000531480 OR4C16Q8NGL9 310 aa11.5□□□□□ -0.57
CPSF1-206ENST00000531480 OR4C13Q8NGP0 309 aa11.5□□□□□ -0.57
CPSF1-206ENST00000531480 TERB2Q8NHR7 220 aa11.5□□□□□ -0.57
CPSF1-206ENST00000531480 ZFAND1Q8TCF1 268 aa11.5□□□□□ -0.57
CPSF1-206ENST00000531480 RITA1Q96K30 269 aa11.5□□□□□ -0.57
CPSF1-206ENST00000531480 HSD17B10Q99714 261 aaKnown RBP11.5□□□□□ -0.57
CPSF1-206ENST00000531480 TINAGL1Q9GZM7 467 aaPredicted RBP11.5□□□□□ -0.57
CPSF1-206ENST00000531480 FXYD6Q9H0Q3 95 aa11.5□□□□□ -0.57
CPSF1-206ENST00000531480 BEX1Q9HBH7 125 aa11.5□□□□□ -0.57
CPSF1-206ENST00000531480 INMT-MINDY4F8WBC2 141 aa11.49□□□□□ -0.57
CPSF1-206ENST00000531480 M0QYG6 137 aa11.49□□□□□ -0.57
CPSF1-206ENST00000531480 IGKV1-16P04430 117 aa11.49□□□□□ -0.57
CPSF1-206ENST00000531480 H2AFB2P0C5Z0 115 aa11.49□□□□□ -0.57
CPSF1-206ENST00000531480 ZNF735P0CB33 412 aa11.49□□□□□ -0.57
CPSF1-206ENST00000531480 MDKP21741 143 aaPredicted RBP11.49□□□□□ -0.57
CPSF1-206ENST00000531480 PROK1P58294 105 aa11.49□□□□□ -0.57
CPSF1-206ENST00000531480 TAS2R31P59538 309 aa11.49□□□□□ -0.57
CPSF1-206ENST00000531480 UBE2MP61081 183 aaKnown RBP11.49□□□□□ -0.57
CPSF1-206ENST00000531480 HERV-K104P61576 105 aa11.49□□□□□ -0.57
CPSF1-206ENST00000531480 HNF4GQ14541 408 aa11.49□□□□□ -0.57
CPSF1-206ENST00000531480 SCGB2B2Q4G0G5 96 aa11.49□□□□□ -0.57
CPSF1-206ENST00000531480 ZNF66Q6ZN08 573 aa11.49□□□□□ -0.57
CPSF1-206ENST00000531480 Q6ZNX1 250 aa11.49□□□□□ -0.57
CPSF1-206ENST00000531480 IDO2Q6ZQW0 420 aa11.49□□□□□ -0.57
CPSF1-206ENST00000531480 ZNF818PQ6ZRF7 136 aa11.49□□□□□ -0.57
CPSF1-206ENST00000531480 Q6ZS46 218 aa11.49□□□□□ -0.57
CPSF1-206ENST00000531480 OR4D10Q8NGI6 311 aa11.49□□□□□ -0.57
CPSF1-206ENST00000531480 SECTM1Q8WVN6 248 aa11.49□□□□□ -0.57
CPSF1-206ENST00000531480 RBMXL1Q96E39 390 aaKnown RBP11.49□□□□□ -0.57
CPSF1-206ENST00000531480 MARVELD1Q9BSK0 173 aa11.49□□□□□ -0.57
CPSF1-206ENST00000531480 PRSS22Q9GZN4 317 aa11.49□□□□□ -0.57
CPSF1-206ENST00000531480 CCL28Q9NRJ3 127 aa11.49□□□□□ -0.57
CPSF1-206ENST00000531480 SERTAD4Q9NUC0 356 aa11.49□□□□□ -0.57
CPSF1-206ENST00000531480 LIN7CQ9NUP9 197 aaKnown RBP11.49□□□□□ -0.57
CPSF1-206ENST00000531480 ANK2Q01484 3957 aa11.49□□□□□ -0.57
CPSF1-206ENST00000531480 NDUFB6O95139 128 aa11.48□□□□□ -0.57
CPSF1-206ENST00000531480 APOA2P02652 100 aa11.48□□□□□ -0.57
CPSF1-206ENST00000531480 RRASP10301 218 aa11.48□□□□□ -0.57
CPSF1-206ENST00000531480 BRWD1-AS2P59051 145 aa11.48□□□□□ -0.57
CPSF1-206ENST00000531480 RPL30P62888 115 aaKnown RBP11.48□□□□□ -0.57
CPSF1-206ENST00000531480 TMEM177Q53S58 311 aa11.48□□□□□ -0.57
CPSF1-206ENST00000531480 OR51S1Q8NGJ8 323 aa11.48□□□□□ -0.57
CPSF1-206ENST00000531480 WIPF2Q8TF74 440 aaPredicted RBP11.48□□□□□ -0.57
CPSF1-206ENST00000531480 SLC5A7Q9GZV3 580 aa11.48□□□□□ -0.57
CPSF1-206ENST00000531480 SLC35D1Q9NTN3 355 aa11.48□□□□□ -0.57
CPSF1-206ENST00000531480 NBR2O15453 112 aa11.47□□□□□ -0.57
CPSF1-206ENST00000531480 PEX14O75381 377 aa11.47□□□□□ -0.57
CPSF1-206ENST00000531480 SPDEFO95238 335 aa11.47□□□□□ -0.57
CPSF1-206ENST00000531480 FXYD4P59646 89 aa11.47□□□□□ -0.57
CPSF1-206ENST00000531480 ABCA11PQ4W5N1 156 aa11.47□□□□□ -0.57
CPSF1-206ENST00000531480 OR2T6Q8NHC8 308 aa11.47□□□□□ -0.57
CPSF1-206ENST00000531480 MRGPRFQ96AM1 343 aa11.47□□□□□ -0.57
CPSF1-206ENST00000531480 RSRP1Q9BUV0 290 aa11.47□□□□□ -0.57
CPSF1-206ENST00000531480 WNT10AQ9GZT5 417 aa11.47□□□□□ -0.57
CPSF1-206ENST00000531480 ALX4Q9H161 411 aaPredicted RBP11.47□□□□□ -0.57
CPSF1-206ENST00000531480 C14orf166Q9Y224 244 aaKnown RBP11.47□□□□□ -0.57
CPSF1-206ENST00000531480 H7C2Y5 167 aa11.46□□□□□ -0.57
CPSF1-206ENST00000531480 RBFOX2O43251 390 aaKnown RBP eCLIP11.46□□□□□ -0.57
CPSF1-206ENST00000531480 IGLV2-23P01705 113 aa11.46□□□□□ -0.57
CPSF1-206ENST00000531480 IGHG2P01859 326 aa11.46□□□□□ -0.57
CPSF1-206ENST00000531480 RLN1P04808 185 aa11.46□□□□□ -0.57
CPSF1-206ENST00000531480 CNTFRP26992 372 aa11.46□□□□□ -0.57
CPSF1-206ENST00000531480 LGALS7P47929 136 aa11.46□□□□□ -0.57
CPSF1-206ENST00000531480 RAB25P57735 213 aa11.46□□□□□ -0.57
CPSF1-206ENST00000531480 MMDQ15546 238 aa11.46□□□□□ -0.57
CPSF1-206ENST00000531480 RTL8BQ17RB0 113 aa11.46□□□□□ -0.57
CPSF1-206ENST00000531480 KCTD9Q7L273 389 aa11.46□□□□□ -0.57
CPSF1-206ENST00000531480 CMTM1Q8IZ96 169 aa11.46□□□□□ -0.57
CPSF1-206ENST00000531480 WFDC12Q8WWY7 111 aa11.46□□□□□ -0.57
CPSF1-206ENST00000531480 FLYWCH2Q96CP2 140 aaKnown RBP11.46□□□□□ -0.57
CPSF1-206ENST00000531480 ZNF486Q96H40 463 aaPredicted RBP11.46□□□□□ -0.57
CPSF1-206ENST00000531480 C20orf85Q9H1P6 137 aa11.46□□□□□ -0.57
CPSF1-206ENST00000531480 NUDT15Q9NV35 164 aa11.46□□□□□ -0.57
CPSF1-206ENST00000531480 ZNF580Q9UK33 172 aa11.46□□□□□ -0.57
CPSF1-206ENST00000531480 RNF114Q9Y508 228 aa11.46□□□□□ -0.57
CPSF1-206ENST00000531480 NCBP2LA6PVI3 153 aaKnown RBP11.45□□□□□ -0.58
CPSF1-206ENST00000531480 GPR31O00270 319 aa11.45□□□□□ -0.58
CPSF1-206ENST00000531480 RRHO14718 337 aa11.45□□□□□ -0.58
CPSF1-206ENST00000531480 HLA-DRB1P01911 266 aa11.45□□□□□ -0.58
CPSF1-206ENST00000531480 IL5P05113 134 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms