RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 HSMCR30P0CW71 290 aa13.97□□□□□ -0.17
SSSCA1-206ENST00000531405 SERPINB10P48595 397 aa13.97□□□□□ -0.17
SSSCA1-206ENST00000531405 C2orf76Q3KRA6 126 aa13.97□□□□□ -0.17
SSSCA1-206ENST00000531405 TMEM177Q53S58 311 aa13.97□□□□□ -0.17
SSSCA1-206ENST00000531405 IDO2Q6ZQW0 420 aa13.97□□□□□ -0.17
SSSCA1-206ENST00000531405 ADAD2Q8NCV1 583 aaKnown RBP13.97□□□□□ -0.17
SSSCA1-206ENST00000531405 OR56B1Q8NGI3 324 aa13.97□□□□□ -0.17
SSSCA1-206ENST00000531405 FAM3DQ96BQ1 224 aa13.97□□□□□ -0.17
SSSCA1-206ENST00000531405 USMG5Q96IX5 58 aa13.97□□□□□ -0.17
SSSCA1-206ENST00000531405 KCNK7Q9Y2U2 307 aa13.97□□□□□ -0.17
SSSCA1-206ENST00000531405 TMEM272A0A1B0GTI8 110 aa13.96□□□□□ -0.17
SSSCA1-206ENST00000531405 DENRO43583 198 aaKnown RBP13.96□□□□□ -0.17
SSSCA1-206ENST00000531405 OR2A4O95047 310 aa13.96□□□□□ -0.17
SSSCA1-206ENST00000531405 FCGR3AP08637 254 aa13.96□□□□□ -0.17
SSSCA1-206ENST00000531405 CBX3Q13185 183 aa13.96□□□□□ -0.17
SSSCA1-206ENST00000531405 IRF3Q14653 427 aa13.96□□□□□ -0.17
SSSCA1-206ENST00000531405 TNXAQ16473 311 aa13.96□□□□□ -0.17
SSSCA1-206ENST00000531405 TATDN3Q17R31 274 aa13.96□□□□□ -0.17
SSSCA1-206ENST00000531405 RTL8BQ17RB0 113 aa13.96□□□□□ -0.17
SSSCA1-206ENST00000531405 OR10J5Q8NHC4 309 aa13.96□□□□□ -0.17
SSSCA1-206ENST00000531405 CABLES2Q9BTV7 478 aa13.96□□□□□ -0.17
SSSCA1-206ENST00000531405 SIGLEC8Q9NYZ4 499 aa13.96□□□□□ -0.17
SSSCA1-206ENST00000531405 ZNF230Q9UIE0 474 aaPredicted RBP13.96□□□□□ -0.17
SSSCA1-206ENST00000531405 CEPT1Q9Y6K0 416 aa13.96□□□□□ -0.17
SSSCA1-206ENST00000531405 TRBV6-7A0A0A0MS04 114 aa13.95□□□□□ -0.18
SSSCA1-206ENST00000531405 BMPR1BO00238 502 aa13.95□□□□□ -0.18
SSSCA1-206ENST00000531405 OR9G9P0C7N8 305 aa13.95□□□□□ -0.18
SSSCA1-206ENST00000531405 CALRP27797 417 aaKnown RBP13.95□□□□□ -0.18
SSSCA1-206ENST00000531405 MECP2P51608 486 aaKnown RBP13.95□□□□□ -0.18
SSSCA1-206ENST00000531405 CD81P60033 236 aa13.95□□□□□ -0.18
SSSCA1-206ENST00000531405 MRPS15P82914 257 aaKnown RBP13.95□□□□□ -0.18
SSSCA1-206ENST00000531405 PRSS8Q16651 343 aa13.95□□□□□ -0.18
SSSCA1-206ENST00000531405 HES5Q5TA89 166 aa13.95□□□□□ -0.18
SSSCA1-206ENST00000531405 SRSF12Q8WXF0 261 aaKnown RBP13.95□□□□□ -0.18
SSSCA1-206ENST00000531405 SNAPC3Q92966 411 aa13.95□□□□□ -0.18
SSSCA1-206ENST00000531405 HIPK2Q9H2X6 1198 aa13.95□□□□□ -0.18
SSSCA1-206ENST00000531405 AKIP1Q9NQ31 210 aa13.95□□□□□ -0.18
SSSCA1-206ENST00000531405 A0A075B6Q4 140 aa13.94□□□□□ -0.18
SSSCA1-206ENST00000531405 A0A0B4J203 849 aa13.94□□□□□ -0.18
SSSCA1-206ENST00000531405 SHISA3A0PJX4 238 aa13.94□□□□□ -0.18
SSSCA1-206ENST00000531405 LINC00473A8K010 186 aa13.94□□□□□ -0.18
SSSCA1-206ENST00000531405 CASQ2O14958 399 aaPredicted RBP13.94□□□□□ -0.18
SSSCA1-206ENST00000531405 MPPED1O15442 326 aa13.94□□□□□ -0.18
SSSCA1-206ENST00000531405 ARL6IP5O75915 188 aa13.94□□□□□ -0.18
SSSCA1-206ENST00000531405 CRYZL1O95825 349 aa13.94□□□□□ -0.18
SSSCA1-206ENST00000531405 EDN2P20800 178 aa13.94□□□□□ -0.18
SSSCA1-206ENST00000531405 RHOGP84095 191 aa13.94□□□□□ -0.18
SSSCA1-206ENST00000531405 ZNF45Q02386 682 aa13.94□□□□□ -0.18
SSSCA1-206ENST00000531405 TPBGQ13641 420 aa13.94□□□□□ -0.18
SSSCA1-206ENST00000531405 EXOSC2Q13868 293 aaKnown RBP13.94□□□□□ -0.18
SSSCA1-206ENST00000531405 VMA21Q3ZAQ7 101 aa13.94□□□□□ -0.18
SSSCA1-206ENST00000531405 CD300EQ496F6 205 aaPredicted RBP13.94□□□□□ -0.18
SSSCA1-206ENST00000531405 LINC00322Q6ZN03 302 aaPredicted RBP13.94□□□□□ -0.18
SSSCA1-206ENST00000531405 ACOT12Q8WYK0 555 aa13.94□□□□□ -0.18
SSSCA1-206ENST00000531405 DDB2Q92466 427 aa13.94□□□□□ -0.18
SSSCA1-206ENST00000531405 RAB3CQ96E17 227 aa13.94□□□□□ -0.18
SSSCA1-206ENST00000531405 WFDC10AQ9H1F0 79 aa13.94□□□□□ -0.18
SSSCA1-206ENST00000531405 SCN3BQ9NY72 215 aa13.94□□□□□ -0.18
SSSCA1-206ENST00000531405 PEMTQ9UBM1 199 aa13.94□□□□□ -0.18
SSSCA1-206ENST00000531405 RBM7Q9Y580 266 aaKnown RBP13.94□□□□□ -0.18
SSSCA1-206ENST00000531405 CD7P09564 240 aa13.93□□□□□ -0.18
SSSCA1-206ENST00000531405 GNB3P16520 340 aa13.93□□□□□ -0.18
SSSCA1-206ENST00000531405 UBE2KP61086 200 aa13.93□□□□□ -0.18
SSSCA1-206ENST00000531405 FABP5Q01469 135 aa13.93□□□□□ -0.18
SSSCA1-206ENST00000531405 TAGLNQ01995 201 aaKnown RBP13.93□□□□□ -0.18
SSSCA1-206ENST00000531405 TEX45Q8NA69 505 aa13.93□□□□□ -0.18
SSSCA1-206ENST00000531405 NEURL2Q9BR09 285 aa13.93□□□□□ -0.18
SSSCA1-206ENST00000531405 V9GY05 133 aa13.93□□□□□ -0.18
SSSCA1-206ENST00000531405 RRASP10301 218 aa13.92□□□□□ -0.18
SSSCA1-206ENST00000531405 DUTP33316 252 aaKnown RBP13.92□□□□□ -0.18
SSSCA1-206ENST00000531405 TRAM1Q15629 374 aa13.92□□□□□ -0.18
SSSCA1-206ENST00000531405 C10orf55Q5SWW7 151 aa13.92□□□□□ -0.18
SSSCA1-206ENST00000531405 DEFB125Q8N687 156 aa13.92□□□□□ -0.18
SSSCA1-206ENST00000531405 OR2K2Q8NGT1 345 aa13.92□□□□□ -0.18
SSSCA1-206ENST00000531405 GINS4Q9BRT9 223 aa13.92□□□□□ -0.18
SSSCA1-206ENST00000531405 ZNF430Q9H8G1 570 aaPredicted RBP13.92□□□□□ -0.18
SSSCA1-206ENST00000531405 RAB22AQ9UL26 194 aa13.92□□□□□ -0.18
SSSCA1-206ENST00000531405 SELENOKQ9Y6D0 94 aa13.92□□□□□ -0.18
SSSCA1-206ENST00000531405 IGKV1D-8A0A087WSZ0 117 aa13.91□□□□□ -0.18
SSSCA1-206ENST00000531405 RBMY1BA6NDE4 496 aaKnown RBP13.91□□□□□ -0.18
SSSCA1-206ENST00000531405 RBMY1EA6NEQ0 496 aaKnown RBP13.91□□□□□ -0.18
SSSCA1-206ENST00000531405 FAM223BA6NKX1 122 aa13.91□□□□□ -0.18
SSSCA1-206ENST00000531405 ZNF785A8K8V0 405 aa13.91□□□□□ -0.18
SSSCA1-206ENST00000531405 PPP5D1E7EU14 171 aa13.91□□□□□ -0.18
SSSCA1-206ENST00000531405 JTBO76095 146 aa13.91□□□□□ -0.18
SSSCA1-206ENST00000531405 TPPPO94811 219 aa13.91□□□□□ -0.18
SSSCA1-206ENST00000531405 RBMY1DP0C7P1 496 aaKnown RBP13.91□□□□□ -0.18
SSSCA1-206ENST00000531405 ATP5G2Q06055 141 aa13.91□□□□□ -0.18
SSSCA1-206ENST00000531405 FAM223AQ8IWN6 122 aa13.91□□□□□ -0.18
SSSCA1-206ENST00000531405 OR10R2Q8NGX6 335 aa13.91□□□□□ -0.18
SSSCA1-206ENST00000531405 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.9□□□□□ -0.18
SSSCA1-206ENST00000531405 TRBV9A0A0B4J1U6 114 aa13.9□□□□□ -0.18
SSSCA1-206ENST00000531405 J3QRK9 145 aa13.9□□□□□ -0.18
SSSCA1-206ENST00000531405 MFNGO00587 321 aa13.9□□□□□ -0.18
SSSCA1-206ENST00000531405 AIREO43918 545 aa13.9□□□□□ -0.18
SSSCA1-206ENST00000531405 HLA-AP01891 365 aaKnown RBP13.9□□□□□ -0.18
SSSCA1-206ENST00000531405 SAA1P0DJI8 122 aaPredicted RBP13.9□□□□□ -0.18
SSSCA1-206ENST00000531405 PSMA1P25786 263 aaKnown RBP13.9□□□□□ -0.18
SSSCA1-206ENST00000531405 OR10A3P58181 314 aa13.9□□□□□ -0.18
SSSCA1-206ENST00000531405 MLLT11Q13015 90 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms