RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 NPCDR1Q9BY65 106 aa14.29□□□□□ -0.12
BRCA2-204ENST00000530893 FCGR3BO75015 233 aa14.28□□□□□ -0.12
BRCA2-204ENST00000530893 IGKV1D-33P01593 117 aa14.28□□□□□ -0.12
BRCA2-204ENST00000530893 IGKV1-33P01594 117 aa14.28□□□□□ -0.12
BRCA2-204ENST00000530893 ACSM6Q6P461 480 aa14.28□□□□□ -0.12
BRCA2-204ENST00000530893 IL19Q9UHD0 177 aa14.28□□□□□ -0.12
BRCA2-204ENST00000530893 EIF3GO75821 320 aaKnown RBP eCLIP14.27□□□□□ -0.12
BRCA2-204ENST00000530893 SPCS3P61009 180 aa14.27□□□□□ -0.12
BRCA2-204ENST00000530893 ERVK-16P61578 105 aa14.27□□□□□ -0.12
BRCA2-204ENST00000530893 MEF2BQ02080 365 aaPredicted RBP14.27□□□□□ -0.12
BRCA2-204ENST00000530893 LTC4SQ16873 150 aa14.27□□□□□ -0.12
BRCA2-204ENST00000530893 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.27□□□□□ -0.12
BRCA2-204ENST00000530893 ZNRF1Q8ND25 227 aa14.27□□□□□ -0.12
BRCA2-204ENST00000530893 OR10G9Q8NGN4 311 aa14.27□□□□□ -0.12
BRCA2-204ENST00000530893 OR10G7Q8NGN6 311 aa14.27□□□□□ -0.12
BRCA2-204ENST00000530893 ACTR3CQ9C0K3 210 aaPredicted RBP14.27□□□□□ -0.12
BRCA2-204ENST00000530893 IFI27L2Q9H2X8 130 aa14.27□□□□□ -0.12
BRCA2-204ENST00000530893 CALYQ9NYX4 217 aa14.27□□□□□ -0.12
BRCA2-204ENST00000530893 DIDO1Q9BTC0 2240 aaKnown RBP14.27□□□□□ -0.13
BRCA2-204ENST00000530893 ZNF727A8MUV8 499 aa14.27□□□□□ -0.13
BRCA2-204ENST00000530893 TMEM250H0YL14 139 aa14.27□□□□□ -0.13
BRCA2-204ENST00000530893 CYB5R3P00387 301 aaPredicted RBP14.27□□□□□ -0.13
BRCA2-204ENST00000530893 CGB3P0DN86 165 aa14.27□□□□□ -0.13
BRCA2-204ENST00000530893 CGB7P0DN87 165 aa14.27□□□□□ -0.13
BRCA2-204ENST00000530893 EDDM3BP56851 147 aa14.27□□□□□ -0.13
BRCA2-204ENST00000530893 OR2B8PP59922 312 aa14.27□□□□□ -0.13
BRCA2-204ENST00000530893 IQCF2Q8IXL9 164 aa14.27□□□□□ -0.13
BRCA2-204ENST00000530893 RBMXL3Q8N7X1 1067 aaKnown RBP14.27□□□□□ -0.13
BRCA2-204ENST00000530893 FAM57AQ8TBR7 257 aa14.27□□□□□ -0.13
BRCA2-204ENST00000530893 ITLN1Q8WWA0 313 aa14.27□□□□□ -0.13
BRCA2-204ENST00000530893 GGACTQ9BVM4 153 aa14.27□□□□□ -0.13
BRCA2-204ENST00000530893 QTRT1Q9BXR0 403 aaKnown RBP14.27□□□□□ -0.13
BRCA2-204ENST00000530893 SDF2L1Q9HCN8 221 aa14.27□□□□□ -0.13
BRCA2-204ENST00000530893 MANBALQ9NQG1 85 aa14.27□□□□□ -0.13
BRCA2-204ENST00000530893 ZFHX4Q86UP3 3567 aa14.26□□□□□ -0.13
BRCA2-204ENST00000530893 IGHV3OR15-7A0A075B7D8 119 aa14.26□□□□□ -0.13
BRCA2-204ENST00000530893 C15orf62A8K5M9 175 aa14.26□□□□□ -0.13
BRCA2-204ENST00000530893 M0R1X1 148 aa14.26□□□□□ -0.13
BRCA2-204ENST00000530893 AP4M1O00189 453 aa14.26□□□□□ -0.13
BRCA2-204ENST00000530893 SPRY3O43610 288 aa14.26□□□□□ -0.13
BRCA2-204ENST00000530893 OR9G9P0C7N8 305 aa14.26□□□□□ -0.13
BRCA2-204ENST00000530893 SMIM6P0DI80 62 aa14.26□□□□□ -0.13
BRCA2-204ENST00000530893 NQO2P16083 231 aa14.26□□□□□ -0.13
BRCA2-204ENST00000530893 PSMB3P49720 205 aa14.26□□□□□ -0.13
BRCA2-204ENST00000530893 LINC00205P59089 165 aa14.26□□□□□ -0.13
BRCA2-204ENST00000530893 PRAMEF5Q5TYX0 476 aa14.26□□□□□ -0.13
BRCA2-204ENST00000530893 OR4A16Q8NH70 328 aa14.26□□□□□ -0.13
BRCA2-204ENST00000530893 Q8WTZ3 238 aa14.26□□□□□ -0.13
BRCA2-204ENST00000530893 SDSLQ96GA7 329 aa14.26□□□□□ -0.13
BRCA2-204ENST00000530893 S1PR3Q99500 378 aa14.26□□□□□ -0.13
BRCA2-204ENST00000530893 RNF7Q9UBF6 113 aa14.26□□□□□ -0.13
BRCA2-204ENST00000530893 A0A1W2PPE3 182 aa14.25□□□□□ -0.13
BRCA2-204ENST00000530893 MPDU1O75352 247 aa14.25□□□□□ -0.13
BRCA2-204ENST00000530893 RPS10P46783 165 aaKnown RBP14.25□□□□□ -0.13
BRCA2-204ENST00000530893 FABP9Q0Z7S8 132 aa14.25□□□□□ -0.13
BRCA2-204ENST00000530893 FFAR4Q5NUL3 377 aa14.25□□□□□ -0.13
BRCA2-204ENST00000530893 ALKBH2Q6NS38 261 aa14.25□□□□□ -0.13
BRCA2-204ENST00000530893 RPRMLQ8N4K4 120 aa14.25□□□□□ -0.13
BRCA2-204ENST00000530893 DIRC2Q96SL1 478 aa14.25□□□□□ -0.13
BRCA2-204ENST00000530893 CTDSP1Q9GZU7 261 aa14.25□□□□□ -0.13
BRCA2-204ENST00000530893 SPENQ96T58 3664 aaKnown RBP14.25□□□□□ -0.13
BRCA2-204ENST00000530893 A8MXE2 369 aa14.25□□□□□ -0.13
BRCA2-204ENST00000530893 CLDN34H7C241 214 aa14.25□□□□□ -0.13
BRCA2-204ENST00000530893 CYB5BO43169 146 aa14.25□□□□□ -0.13
BRCA2-204ENST00000530893 RND2P52198 227 aa14.25□□□□□ -0.13
BRCA2-204ENST00000530893 S100A12P80511 92 aa14.25□□□□□ -0.13
BRCA2-204ENST00000530893 TMEM30BQ3MIR4 351 aa14.25□□□□□ -0.13
BRCA2-204ENST00000530893 VHLLQ6RSH7 139 aa14.25□□□□□ -0.13
BRCA2-204ENST00000530893 OR13D1Q8NGV5 346 aa14.25□□□□□ -0.13
BRCA2-204ENST00000530893 FAM234AQ9H0X4 552 aa14.25□□□□□ -0.13
BRCA2-204ENST00000530893 WDR83OSQ9Y284 106 aa14.25□□□□□ -0.13
BRCA2-204ENST00000530893 KBTBD11-OT1A0A1B0GTJ5 212 aa14.24□□□□□ -0.13
BRCA2-204ENST00000530893 TGOLN2O43493 480 aa14.24□□□□□ -0.13
BRCA2-204ENST00000530893 S100A9P06702 114 aaKnown RBP14.24□□□□□ -0.13
BRCA2-204ENST00000530893 TNFSF4P23510 183 aa14.24□□□□□ -0.13
BRCA2-204ENST00000530893 CD1BP29016 333 aa14.24□□□□□ -0.13
BRCA2-204ENST00000530893 ZNF134P52741 427 aa14.24□□□□□ -0.13
BRCA2-204ENST00000530893 CD81P60033 236 aa14.24□□□□□ -0.13
BRCA2-204ENST00000530893 ACOT6Q3I5F7 207 aaPredicted RBP14.24□□□□□ -0.13
BRCA2-204ENST00000530893 SPRNQ5BIV9 151 aa14.24□□□□□ -0.13
BRCA2-204ENST00000530893 WDR25Q64LD2 544 aaPredicted RBP14.24□□□□□ -0.13
BRCA2-204ENST00000530893 FAM180AQ6UWF9 173 aa14.24□□□□□ -0.13
BRCA2-204ENST00000530893 OR4S2Q8NH73 311 aa14.24□□□□□ -0.13
BRCA2-204ENST00000530893 Q8TCH9 128 aa14.24□□□□□ -0.13
BRCA2-204ENST00000530893 DDB2Q92466 427 aa14.24□□□□□ -0.13
BRCA2-204ENST00000530893 GCM1Q9NP62 436 aa14.24□□□□□ -0.13
BRCA2-204ENST00000530893 GFOD1Q9NXC2 390 aa14.24□□□□□ -0.13
BRCA2-204ENST00000530893 NAT8Q9UHE5 227 aa14.24□□□□□ -0.13
BRCA2-204ENST00000530893 SVILO95425 2214 aa14.24□□□□□ -0.13
BRCA2-204ENST00000530893 TRGV10A0A0A0MS01 117 aa14.24□□□□□ -0.13
BRCA2-204ENST00000530893 TM4SF5O14894 197 aa14.24□□□□□ -0.13
BRCA2-204ENST00000530893 TMPRSS3P57727 454 aa14.24□□□□□ -0.13
BRCA2-204ENST00000530893 ERVFRD-1P60508 538 aa14.24□□□□□ -0.13
BRCA2-204ENST00000530893 TNFAIP6P98066 277 aaPredicted RBP14.24□□□□□ -0.13
BRCA2-204ENST00000530893 TFF3Q07654 80 aa14.24□□□□□ -0.13
BRCA2-204ENST00000530893 C17orf58Q2M2W7 97 aa14.24□□□□□ -0.13
BRCA2-204ENST00000530893 TMEM249Q2WGJ8 235 aa14.24□□□□□ -0.13
BRCA2-204ENST00000530893 STUMQ69YW2 141 aa14.24□□□□□ -0.13
BRCA2-204ENST00000530893 CYP2G1PQ6ZSU1 146 aa14.24□□□□□ -0.13
BRCA2-204ENST00000530893 NUP37Q8NFH4 326 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms