RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	AIRE	O43918	545 aa		11.85	□□□□□ -0.51
TM9SF1-209	ENST00000530468	PSMD7	P51665	324 aa		11.85	□□□□□ -0.51
TM9SF1-209	ENST00000530468	CLDN12	P56749	244 aa		11.85	□□□□□ -0.51
TM9SF1-209	ENST00000530468	TPBG	Q13641	420 aa		11.85	□□□□□ -0.51
TM9SF1-209	ENST00000530468	C2orf76	Q3KRA6	126 aa		11.85	□□□□□ -0.51
TM9SF1-209	ENST00000530468	VMA21	Q3ZAQ7	101 aa		11.85	□□□□□ -0.51
TM9SF1-209	ENST00000530468	TEX45	Q8NA69	505 aa		11.85	□□□□□ -0.51
TM9SF1-209	ENST00000530468	SNAPC3	Q92966	411 aa		11.85	□□□□□ -0.51
TM9SF1-209	ENST00000530468	ADTRP	Q96IZ2	230 aa		11.85	□□□□□ -0.51
TM9SF1-209	ENST00000530468	CENPO	Q9BU64	300 aa		11.85	□□□□□ -0.51
TM9SF1-209	ENST00000530468	RAB22A	Q9UL26	194 aa		11.85	□□□□□ -0.51
TM9SF1-209	ENST00000530468	SHISA3	A0PJX4	238 aa		11.84	□□□□□ -0.51
TM9SF1-209	ENST00000530468	FAM223B	A6NKX1	122 aa		11.84	□□□□□ -0.51
TM9SF1-209	ENST00000530468	SRRM4	A7MD48	611 aa	Known RBP	11.84	□□□□□ -0.51
TM9SF1-209	ENST00000530468	TRBV12-3	P01733	135 aa		11.84	□□□□□ -0.51
TM9SF1-209	ENST00000530468	FCGR3A	P08637	254 aa		11.84	□□□□□ -0.51
TM9SF1-209	ENST00000530468	OR9G9	P0C7N8	305 aa		11.84	□□□□□ -0.51
TM9SF1-209	ENST00000530468	CALR	P27797	417 aa	Known RBP	11.84	□□□□□ -0.51
TM9SF1-209	ENST00000530468	UBE2K	P61086	200 aa		11.84	□□□□□ -0.51
TM9SF1-209	ENST00000530468	RPS25	P62851	125 aa	Known RBP	11.84	□□□□□ -0.51
TM9SF1-209	ENST00000530468	DEFA5	Q01523	94 aa		11.84	□□□□□ -0.51
TM9SF1-209	ENST00000530468	IGSF11	Q5DX21	431 aa		11.84	□□□□□ -0.51
TM9SF1-209	ENST00000530468	FAM223A	Q8IWN6	122 aa		11.84	□□□□□ -0.51
TM9SF1-209	ENST00000530468	ADAD2	Q8NCV1	583 aa	Known RBP	11.84	□□□□□ -0.51
TM9SF1-209	ENST00000530468	RAB3C	Q96E17	227 aa		11.84	□□□□□ -0.51
TM9SF1-209	ENST00000530468	ADAM30	Q9UKF2	790 aa		11.84	□□□□□ -0.51
TM9SF1-209	ENST00000530468	KCNK7	Q9Y2U2	307 aa		11.84	□□□□□ -0.51
TM9SF1-209	ENST00000530468	RBM7	Q9Y580	266 aa	Known RBP	11.84	□□□□□ -0.51
TM9SF1-209	ENST00000530468		V9GY05	133 aa		11.84	□□□□□ -0.51
TM9SF1-209	ENST00000530468	TMEM272	A0A1B0GTI8	110 aa		11.83	□□□□□ -0.52
TM9SF1-209	ENST00000530468	MSGN1	A6NI15	193 aa		11.83	□□□□□ -0.52
TM9SF1-209	ENST00000530468	MPPED1	O15442	326 aa		11.83	□□□□□ -0.52
TM9SF1-209	ENST00000530468	GSTT2	P0CG29	244 aa		11.83	□□□□□ -0.52
TM9SF1-209	ENST00000530468	GSTT2B	P0CG30	244 aa		11.83	□□□□□ -0.52
TM9SF1-209	ENST00000530468	HSMCR30	P0CW71	290 aa		11.83	□□□□□ -0.52
TM9SF1-209	ENST00000530468	MECP2	P51608	486 aa	Known RBP	11.83	□□□□□ -0.52
TM9SF1-209	ENST00000530468	MLLT11	Q13015	90 aa	Predicted RBP	11.83	□□□□□ -0.52
TM9SF1-209	ENST00000530468	TNXA	Q16473	311 aa		11.83	□□□□□ -0.52
TM9SF1-209	ENST00000530468	PRSS8	Q16651	343 aa		11.83	□□□□□ -0.52
TM9SF1-209	ENST00000530468	MRGPRG-AS1	Q2M3A8	158 aa		11.83	□□□□□ -0.52
TM9SF1-209	ENST00000530468	ADAMTSL5	Q6ZMM2	481 aa		11.83	□□□□□ -0.52
TM9SF1-209	ENST00000530468	LAX1	Q8IWV1	398 aa		11.83	□□□□□ -0.52
TM9SF1-209	ENST00000530468	IL17D	Q8TAD2	202 aa		11.83	□□□□□ -0.52
TM9SF1-209	ENST00000530468	SRSF12	Q8WXF0	261 aa	Known RBP	11.83	□□□□□ -0.52
TM9SF1-209	ENST00000530468	C5orf30	Q96GV9	206 aa		11.83	□□□□□ -0.52
TM9SF1-209	ENST00000530468	GINS4	Q9BRT9	223 aa		11.83	□□□□□ -0.52
TM9SF1-209	ENST00000530468	TPRKB	Q9Y3C4	175 aa		11.83	□□□□□ -0.52
TM9SF1-209	ENST00000530468	STARD9	Q9P2P6	4700 aa		11.83	□□□□□ -0.52
TM9SF1-209	ENST00000530468	CREBL2	O60519	120 aa	Predicted RBP	11.82	□□□□□ -0.52
TM9SF1-209	ENST00000530468	APELA	P0DMC3	54 aa		11.82	□□□□□ -0.52
TM9SF1-209	ENST00000530468	GADD45A	P24522	165 aa		11.82	□□□□□ -0.52
TM9SF1-209	ENST00000530468	FAM209B	Q5JX69	171 aa		11.82	□□□□□ -0.52
TM9SF1-209	ENST00000530468	OSR1	Q8TAX0	266 aa	Predicted RBP	11.82	□□□□□ -0.52
TM9SF1-209	ENST00000530468	DDB2	Q92466	427 aa		11.82	□□□□□ -0.52
TM9SF1-209	ENST00000530468	CEPT1	Q9Y6K0	416 aa		11.82	□□□□□ -0.52
TM9SF1-209	ENST00000530468	EPPK1	P58107	5090 aa	Known RBP	11.81	□□□□□ -0.52
TM9SF1-209	ENST00000530468	IZUMO1R	A6ND01	250 aa		11.81	□□□□□ -0.52
TM9SF1-209	ENST00000530468	ANKRD65	E5RJM6	399 aa		11.81	□□□□□ -0.52
TM9SF1-209	ENST00000530468	BMPR1B	O00238	502 aa		11.81	□□□□□ -0.52
TM9SF1-209	ENST00000530468	RBMXL2	O75526	392 aa	Known RBP	11.81	□□□□□ -0.52
TM9SF1-209	ENST00000530468	TUSC2	O75896	110 aa		11.81	□□□□□ -0.52
TM9SF1-209	ENST00000530468	JTB	O76095	146 aa		11.81	□□□□□ -0.52
TM9SF1-209	ENST00000530468	CRYZL1	O95825	349 aa		11.81	□□□□□ -0.52
TM9SF1-209	ENST00000530468	DUT	P33316	252 aa	Known RBP	11.81	□□□□□ -0.52
TM9SF1-209	ENST00000530468	CD81	P60033	236 aa		11.81	□□□□□ -0.52
TM9SF1-209	ENST00000530468	RHOG	P84095	191 aa		11.81	□□□□□ -0.52
TM9SF1-209	ENST00000530468	ATP5G2	Q06055	141 aa		11.81	□□□□□ -0.52
TM9SF1-209	ENST00000530468	EXOSC2	Q13868	293 aa	Known RBP	11.81	□□□□□ -0.52
TM9SF1-209	ENST00000530468	HES5	Q5TA89	166 aa		11.81	□□□□□ -0.52
TM9SF1-209	ENST00000530468	LINC00322	Q6ZN03	302 aa	Predicted RBP	11.81	□□□□□ -0.52
TM9SF1-209	ENST00000530468	OR10R2	Q8NGX6	335 aa		11.81	□□□□□ -0.52
TM9SF1-209	ENST00000530468	ACOT12	Q8WYK0	555 aa		11.81	□□□□□ -0.52
TM9SF1-209	ENST00000530468	SPIN2A	Q99865	258 aa		11.81	□□□□□ -0.52
TM9SF1-209	ENST00000530468	SPIN2B	Q9BPZ2	258 aa		11.81	□□□□□ -0.52
TM9SF1-209	ENST00000530468	DUSP21	Q9H596	190 aa		11.81	□□□□□ -0.52
TM9SF1-209	ENST00000530468	ACOT13	Q9NPJ3	140 aa		11.81	□□□□□ -0.52
TM9SF1-209	ENST00000530468	AKIP1	Q9NQ31	210 aa		11.81	□□□□□ -0.52
TM9SF1-209	ENST00000530468	SLC2A8	Q9NY64	477 aa		11.81	□□□□□ -0.52
TM9SF1-209	ENST00000530468	ZNF230	Q9UIE0	474 aa	Predicted RBP	11.81	□□□□□ -0.52
TM9SF1-209	ENST00000530468	DNAH1	Q9P2D7	4330 aa		11.81	□□□□□ -0.52
TM9SF1-209	ENST00000530468	BIRC6	Q9NR09	4857 aa		11.8	□□□□□ -0.52
TM9SF1-209	ENST00000530468	TRBV9	A0A0B4J1U6	114 aa		11.8	□□□□□ -0.52
TM9SF1-209	ENST00000530468	MFNG	O00587	321 aa		11.8	□□□□□ -0.52
TM9SF1-209	ENST00000530468	PDCD5	O14737	125 aa		11.8	□□□□□ -0.52
TM9SF1-209	ENST00000530468	RGS10	O43665	173 aa		11.8	□□□□□ -0.52
TM9SF1-209	ENST00000530468	ACTL6B	O94805	426 aa		11.8	□□□□□ -0.52
TM9SF1-209	ENST00000530468	TPPP	O94811	219 aa		11.8	□□□□□ -0.52
TM9SF1-209	ENST00000530468	HIST1H1D	P16402	221 aa	Known RBP	11.8	□□□□□ -0.52
TM9SF1-209	ENST00000530468	GNB3	P16520	340 aa		11.8	□□□□□ -0.52
TM9SF1-209	ENST00000530468	FABP5	Q01469	135 aa		11.8	□□□□□ -0.52
TM9SF1-209	ENST00000530468	PLA2G7	Q13093	441 aa		11.8	□□□□□ -0.52
TM9SF1-209	ENST00000530468	IDO2	Q6ZQW0	420 aa		11.8	□□□□□ -0.52
TM9SF1-209	ENST00000530468		Q6ZS49	121 aa		11.8	□□□□□ -0.52
TM9SF1-209	ENST00000530468	H1FOO	Q8IZA3	346 aa	Predicted RBP	11.8	□□□□□ -0.52
TM9SF1-209	ENST00000530468	KCTD12	Q96CX2	325 aa	Known RBP	11.8	□□□□□ -0.52
TM9SF1-209	ENST00000530468	NEURL2	Q9BR09	285 aa		11.8	□□□□□ -0.52
TM9SF1-209	ENST00000530468	HIPK2	Q9H2X6	1198 aa		11.8	□□□□□ -0.52
TM9SF1-209	ENST00000530468	PLEKHA3	Q9HB20	300 aa		11.8	□□□□□ -0.52
TM9SF1-209	ENST00000530468	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	11.79	□□□□□ -0.52
TM9SF1-209	ENST00000530468	LINC00473	A8K010	186 aa		11.79	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms