RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 CCL21O00585 134 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 MBTPS2O43462 519 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 SGCEO43556 437 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 OR2T1O43869 369 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 ICOSLGO75144 302 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 SNRNP200O75643 2136 aaKnown RBP3.21□□□□□ -1.9
USP47-209ENST00000530041 IGHMP01871 453 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 ISG15P05161 165 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 CD2P06729 351 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 DCNP07585 359 aaKnown RBP3.21□□□□□ -1.9
USP47-209ENST00000530041 SNRPCP09234 159 aaKnown RBP3.21□□□□□ -1.9
USP47-209ENST00000530041 FBP1P09467 338 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 PGAM2P15259 253 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 NFYBP25208 207 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 HSD11B1P28845 292 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 LPAR6P43657 344 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 HNRNPA3P51991 378 aaKnown RBP3.21□□□□□ -1.9
USP47-209ENST00000530041 AKR1C2P52895 323 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 SKP1P63208 163 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 BTG2P78543 158 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 DEFB103AP81534 67 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 MRPS11P82912 194 aaKnown RBP3.21□□□□□ -1.9
USP47-209ENST00000530041 AKR1C1Q04828 323 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 RPL18Q07020 188 aaKnown RBP3.21□□□□□ -1.9
USP47-209ENST00000530041 FAM53BQ14153 422 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 SMCO1Q147U7 214 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 OR7A5Q15622 319 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 ZNHIT3Q15649 155 aaPredicted RBP3.21□□□□□ -1.9
USP47-209ENST00000530041 SGCAQ16586 387 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 ACTBL2Q562R1 376 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 VAX1Q5SQQ9 334 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 DNLZQ5SXM8 178 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 GLYATL3Q5SZD4 288 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 OR10K2Q6IF99 312 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 EIF5AL1Q6IS14 154 aaKnown RBP3.21□□□□□ -1.9
USP47-209ENST00000530041 NPSR1Q6W5P4 371 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 SLC16A13Q7RTY0 426 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 DEFB128Q7Z7B8 93 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 ZNF525Q8N782 197 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 OR5B3Q8NH48 314 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 LCN9Q8WX39 176 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 DCUN1D4Q92564 292 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 TCEAL3Q969E4 200 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 TMEM230Q96A57 120 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 C2orf50Q96LR7 162 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 C9orf85Q96MD7 179 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 YPEL4Q96NS1 127 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 SIGLEC12Q96PQ1 595 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 TSPAN32Q96QS1 320 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 OR2M4Q96R27 311 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 MICU1Q9BPX6 476 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 NUDT9Q9BW91 350 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 ULBP3Q9BZM4 244 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 BCL2L14Q9BZR8 327 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 PARP11Q9NR21 331 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 TAS2R4Q9NYW5 299 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 DEC1Q9P2X7 70 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 WIF1Q9Y5W5 379 aa3.21□□□□□ -1.9
USP47-209ENST00000530041 TDRD6O60522 2096 aaKnown RBP3.21□□□□□ -1.9
USP47-209ENST00000530041 NUMA1Q14980 2115 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 A0A1B0GW15 77 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 C7orf77A4D0Y5 90 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 TMEM235A6NFC5 223 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 ZNF705EA8MWA4 302 aaPredicted RBP3.2□□□□□ -1.9
USP47-209ENST00000530041 TMEM14DPA8MWL7 114 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 EEF1E1-BLOC1S5C9J1V9 151 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 PRAMEF26H0Y7S4 382 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 SCRG1O75711 98 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 CST4P01036 141 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 CLPSP04118 112 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 SFTA3P0C7M3 94 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 OR8U8P0C7N1 319 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 ZNF806P0C7X5 589 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 PTGDSP41222 190 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 NBL1P41271 181 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 GLP1RP43220 463 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 HAAOP46952 286 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 OR1D4P47884 311 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 GPM6AP51674 278 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 EFNA3P52797 238 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 RPS21P63220 83 aaKnown RBP3.2□□□□□ -1.9
USP47-209ENST00000530041 FAM3AP98173 230 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 PAX2Q02962 417 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 ZNF117Q03924 483 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 SKP2Q13309 424 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 UNC119Q13432 240 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 PDGFRLQ15198 375 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 CST6Q15828 149 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 GABRA6Q16445 453 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 PSG3Q16557 428 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 SCGB2B2Q4G0G5 96 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 TMEM128Q5BJH2 165 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 OPN5Q6U736 354 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 PRSS41Q7RTY9 318 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 TRAPPC6BQ86SZ2 158 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 LHFPL1Q86WI0 220 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 ZFP82Q8N141 532 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 SLC22A18ASQ8N1D0 253 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 ARRDC1Q8N5I2 433 aa3.2□□□□□ -1.9
USP47-209ENST00000530041 ZNF615Q8N8J6 731 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms