RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 OPCMLQ14982 345 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 ACOT7LQ6ZUV0 252 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 ABHD12Q8N2K0 398 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 C8orf31Q8N9H6 132 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 OR9G1Q8NH87 305 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 TMEM186Q96B77 213 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 ARL6Q9H0F7 186 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 ZFP57Q9NU63 452 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 PRELID3BQ9Y3B1 194 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 CR1P17927 2039 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 ITPR3Q14573 2671 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 A0A1B0GU03 582 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 ST8SIA3O43173 380 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 ATG12O94817 140 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 OR2F2O95006 317 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 KRASP01116 189 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 SLC25A6P12236 298 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 G6PCP35575 357 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 NKX2-1P43699 371 aaPredicted RBP11.72□□□□□ -0.53
TTC39A-216ENST00000530004 DLX1P56177 255 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 OR2F1Q13607 317 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 CYB5R2Q6BCY4 276 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 ZNF833PQ6ZTB9 187 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 LINC00311Q8N616 119 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 ZNF596Q8TC21 504 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 DDB2Q92466 427 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 ADTRPQ96IZ2 230 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 CACNG5Q9UF02 275 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 MMP24Q9Y5R2 645 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 INSIG2Q9Y5U4 225 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 POMT1Q9Y6A1 747 aa11.72□□□□□ -0.53
TTC39A-216ENST00000530004 ABCA2Q9BZC7 2435 aa11.71□□□□□ -0.53
TTC39A-216ENST00000530004 TRAV20A0A0B4J274 112 aa11.71□□□□□ -0.54
TTC39A-216ENST00000530004 hCG_1809904A0A1W2PP81 198 aa11.71□□□□□ -0.54
TTC39A-216ENST00000530004 A0A1W2PPE2 198 aa11.71□□□□□ -0.54
TTC39A-216ENST00000530004 A0A1W2PR64 198 aa11.71□□□□□ -0.54
TTC39A-216ENST00000530004 A0A1W2PRV1 198 aa11.71□□□□□ -0.54
TTC39A-216ENST00000530004 TGFAP01135 160 aa11.71□□□□□ -0.54
TTC39A-216ENST00000530004 KIR2DS2P43631 304 aa11.71□□□□□ -0.54
TTC39A-216ENST00000530004 ZNF345Q14585 488 aa11.71□□□□□ -0.54
TTC39A-216ENST00000530004 CXorf66Q5JRM2 361 aaPredicted RBP11.71□□□□□ -0.54
TTC39A-216ENST00000530004 Q6ZRM9 215 aa11.71□□□□□ -0.54
TTC39A-216ENST00000530004 KCNRGQ8N5I3 272 aa11.71□□□□□ -0.54
TTC39A-216ENST00000530004 ZNF383Q8NA42 475 aa11.71□□□□□ -0.54
TTC39A-216ENST00000530004 HEXA-AS1Q9H8Q6 139 aa11.71□□□□□ -0.54
TTC39A-216ENST00000530004 HIF1ANQ9NWT6 349 aa11.71□□□□□ -0.54
TTC39A-216ENST00000530004 DOCK11Q5JSL3 2073 aa11.71□□□□□ -0.54
TTC39A-216ENST00000530004 IGHV2-26A0A0B4J1V2 119 aa11.7□□□□□ -0.54
TTC39A-216ENST00000530004 A0A0D9SG52 128 aa11.7□□□□□ -0.54
TTC39A-216ENST00000530004 TOR1AO14656 332 aa11.7□□□□□ -0.54
TTC39A-216ENST00000530004 RBFOX2O43251 390 aaKnown RBP eCLIP11.7□□□□□ -0.54
TTC39A-216ENST00000530004 PITX3O75364 302 aa11.7□□□□□ -0.54
TTC39A-216ENST00000530004 NXPH3O95157 252 aa11.7□□□□□ -0.54
TTC39A-216ENST00000530004 HPRT1P00492 218 aa11.7□□□□□ -0.54
TTC39A-216ENST00000530004 DVL1P1P54792 670 aaPredicted RBP11.7□□□□□ -0.54
TTC39A-216ENST00000530004 ARF6P62330 175 aa11.7□□□□□ -0.54
TTC39A-216ENST00000530004 PRB3Q04118 309 aaPredicted RBP11.7□□□□□ -0.54
TTC39A-216ENST00000530004 TMUB1Q9BVT8 246 aa11.7□□□□□ -0.54
TTC39A-216ENST00000530004 PLEKHA2Q9HB19 425 aa11.7□□□□□ -0.54
TTC39A-216ENST00000530004 RCL1Q9Y2P8 373 aaKnown RBP11.7□□□□□ -0.54
TTC39A-216ENST00000530004 ARHGAP32A7KAX9 2087 aa11.7□□□□□ -0.54
TTC39A-216ENST00000530004 ZNF469Q96JG9 3925 aaPredicted RBP11.7□□□□□ -0.54
TTC39A-216ENST00000530004 AKAP9Q99996 3911 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 OTOGQ6ZRI0 2925 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 MSGN1A6NI15 193 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 E5RGE8 158 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 RGS13O14921 159 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 P0C879 139 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 CT45A6P0DMU7 189 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 CT45A5P0DMU8 189 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 CT45A7P0DMV0 189 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 NUP62P37198 522 aaPredicted RBP11.69□□□□□ -0.54
TTC39A-216ENST00000530004 POLR2GP62487 172 aaKnown RBP eCLIP11.69□□□□□ -0.54
TTC39A-216ENST00000530004 KRTAP1-1Q07627 177 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 Q8N7P7 452 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 OR4S2Q8NH73 311 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 R3HDM4Q96D70 268 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 CLEC7AQ9BXN2 247 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 MAGT1Q9H0U3 335 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 NSG2Q9Y328 171 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 MAP1AP78559 2803 aaPredicted RBP11.69□□□□□ -0.54
TTC39A-216ENST00000530004 MARCH11A6NNE9 402 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 M0R1W7 72 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 CD99P14209 185 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 GATA3P23771 443 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 COX7A1P24310 79 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 ID3Q02535 119 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 PAX8Q06710 450 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 FAM71F2Q6NXP2 309 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 H2BFWTQ7Z2G1 175 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 KIR3DL3Q8N743 410 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 TNFRSF14Q92956 283 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 AQP10Q96PS8 301 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 MRPL20Q9BYC9 149 aaKnown RBP11.69□□□□□ -0.54
TTC39A-216ENST00000530004 KPTNQ9Y664 436 aa11.69□□□□□ -0.54
TTC39A-216ENST00000530004 KANTRA0A1W2PQU2 76 aa11.68□□□□□ -0.54
TTC39A-216ENST00000530004 SSSCA1O60232 199 aa11.68□□□□□ -0.54
TTC39A-216ENST00000530004 CRYZL1O95825 349 aa11.68□□□□□ -0.54
TTC39A-216ENST00000530004 REG1BP48304 166 aa11.68□□□□□ -0.54
TTC39A-216ENST00000530004 ZNF137PP52743 207 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms