RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 SF3B5Q9BWJ5 86 aaKnown RBP6.57□□□□□ -1.36
CTNND1-223ENST00000529986 MAP1LC3AQ9H492 121 aa6.57□□□□□ -1.36
CTNND1-223ENST00000529986 SPCS1Q9Y6A9 102 aa6.57□□□□□ -1.36
CTNND1-223ENST00000529986 LOC101059948A0A1B0GTJ6 334 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 HOXC4P09017 264 aaPredicted RBP6.56□□□□□ -1.36
CTNND1-223ENST00000529986 SOX8P57073 446 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 C1orf100Q5SVJ3 147 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 SFTA2Q6UW10 78 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 RNF7Q9UBF6 113 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 RAXQ9Y2V3 346 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 MUC21A0A0G2JKD1 596 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 MUC21A0A140T8X8 626 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 OR2H2O95918 312 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 TNFRSF9Q07011 255 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 SNAI3Q3KNW1 292 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 MUC21Q5SSG8 566 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 TCF23Q7RTU1 214 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 GLRX5Q86SX6 157 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 FAM169BQ8N8A8 192 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 LEAP2Q969E1 77 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 SPSB4Q96A44 273 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 H3BUT2 72 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 RBFOX2O43251 390 aaKnown RBP eCLIP6.56□□□□□ -1.364e-7■■■■□ 19.5
CTNND1-223ENST00000529986 SRP19P09132 144 aaKnown RBP6.56□□□□□ -1.36
CTNND1-223ENST00000529986 LGALS3P17931 250 aaKnown RBP6.56□□□□□ -1.36
CTNND1-223ENST00000529986 PRDX2P32119 198 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 BHLHA15Q7RTS1 189 aaPredicted RBP6.56□□□□□ -1.36
CTNND1-223ENST00000529986 SPRED2Q7Z698 418 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 OR5R1Q8NH85 324 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 RCC1LQ96I51 464 aaKnown RBP6.56□□□□□ -1.36
CTNND1-223ENST00000529986 PMCHL2Q9BQD1 86 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 FNDC4Q9H6D8 234 aaPredicted RBP6.56□□□□□ -1.36
CTNND1-223ENST00000529986 MRPL16Q9NX20 251 aaKnown RBP6.56□□□□□ -1.36
CTNND1-223ENST00000529986 IGKV3D-11A0A0A0MRZ8 115 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 TRAV14DV4A0A0A6YYC5 116 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 TRAV17A0A0B4J275 112 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 RNF222A6NCQ9 220 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 S1PR2O95136 353 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 IGKV3-11P04433 115 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 REG1AP05451 166 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 RND2P52198 227 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 FGF12P61328 243 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 UNQ9370/PRO34162Q6UXP9 181 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 SLC25A28Q96A46 364 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 WDYHV1Q96HA8 205 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 NDUFAF3Q9BU61 184 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 PKIBQ9C010 78 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 WDR54Q9H977 334 aa6.56□□□□□ -1.36
CTNND1-223ENST00000529986 MPDU1O75352 247 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 RHBDD2Q6NTF9 364 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 ZNF645Q8N7E2 425 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 OR4C13Q8NGP0 309 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 LAMTOR2Q9Y2Q5 125 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 TNS1Q9HBL0 1735 aaKnown RBP6.55□□□□□ -1.36
CTNND1-223ENST00000529986 MYO16Q9Y6X6 1858 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 DXOO77932 396 aaKnown RBP6.55□□□□□ -1.36
CTNND1-223ENST00000529986 ROM1Q03395 351 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 IL11RAQ14626 422 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 AMMECR1LQ6DCA0 310 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 C10orf126Q8N4M7 172 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 LINC00470Q9BZP3 86 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 IGLV1-36A0A0B4J1U3 117 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 IGKV1-8A0A0C4DH67 115 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 SPINT1O43278 529 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 FOXS1O43638 330 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 UCNP55089 124 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 LDLRAD2Q5SZI1 272 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 ZNF721Q8TF20 911 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 CCL13Q99616 98 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 UBTD1Q9HAC8 227 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 MIA3Q5JRA6 1907 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 CA11O75493 328 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 IGHV4-34P06331 123 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 CCL4P13236 92 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 EIF4EBP2Q13542 120 aaPredicted RBP6.55□□□□□ -1.36
CTNND1-223ENST00000529986 CEACAM21Q3KPI0 293 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 LINC00596Q86U02 117 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 ZNF441Q8N8Z8 693 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 TXNDC17Q9BRA2 123 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 CFHR5Q9BXR6 569 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 CLEC1BQ9P126 229 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 TDRD15B5MCY1 1934 aaKnown RBP6.55□□□□□ -1.36
CTNND1-223ENST00000529986 K7EQS6 105 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 ERGP11308 486 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 FCGR2BP31994 310 aaPredicted RBP6.55□□□□□ -1.36
CTNND1-223ENST00000529986 GFI1BQ5VTD9 330 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 CRISPLD2Q9H0B8 497 aa6.55□□□□□ -1.36
CTNND1-223ENST00000529986 DICER1Q9UPY3 1922 aaKnown RBP6.54□□□□□ -1.36
CTNND1-223ENST00000529986 A0A0J9YW62 118 aa6.54□□□□□ -1.36
CTNND1-223ENST00000529986 C1QTNF9BB2RNN3 333 aa6.54□□□□□ -1.36
CTNND1-223ENST00000529986 F2RL2O00254 374 aa6.54□□□□□ -1.36
CTNND1-223ENST00000529986 SERF1AO75920 110 aa6.54□□□□□ -1.36
CTNND1-223ENST00000529986 C8orf88P0DMB2 117 aa6.54□□□□□ -1.36
CTNND1-223ENST00000529986 GCHFRP30047 84 aa6.54□□□□□ -1.36
CTNND1-223ENST00000529986 SSPNQ14714 243 aa6.54□□□□□ -1.36
CTNND1-223ENST00000529986 TMEM78Q5T7P6 136 aa6.54□□□□□ -1.36
CTNND1-223ENST00000529986 GALNT14Q96FL9 552 aa6.54□□□□□ -1.36
CTNND1-223ENST00000529986 ZNF414Q96IQ9 312 aa6.54□□□□□ -1.36
CTNND1-223ENST00000529986 SCNM1Q9BWG6 230 aa6.54□□□□□ -1.36
CTNND1-223ENST00000529986 CCDC88CQ9P219 2028 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms