RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 MISP3Q96FF7 219 aa8.4□□□□□ -1.06
CCDC90B-214ENST00000529689 CCL13Q99616 98 aa8.4□□□□□ -1.06
CCDC90B-214ENST00000529689 FKBP11Q9NYL4 201 aa8.4□□□□□ -1.06
CCDC90B-214ENST00000529689 LNP1A1A4G5 178 aa8.4□□□□□ -1.07
CCDC90B-214ENST00000529689 HSBP1L1C9JCN9 74 aa8.4□□□□□ -1.07
CCDC90B-214ENST00000529689 NPY1RP25929 384 aa8.4□□□□□ -1.07
CCDC90B-214ENST00000529689 TAS2R45P59539 299 aa8.4□□□□□ -1.07
CCDC90B-214ENST00000529689 ERVFRD-1P60508 538 aa8.4□□□□□ -1.07
CCDC90B-214ENST00000529689 PSG7Q13046 419 aa8.4□□□□□ -1.07
CCDC90B-214ENST00000529689 FXYD3Q14802 87 aa8.4□□□□□ -1.07
CCDC90B-214ENST00000529689 ATP6V1FQ16864 119 aa8.4□□□□□ -1.07
CCDC90B-214ENST00000529689 GCSAMLQ5JQS6 135 aa8.4□□□□□ -1.07
CCDC90B-214ENST00000529689 FAM53AQ6NSI3 398 aaPredicted RBP8.4□□□□□ -1.07
CCDC90B-214ENST00000529689 TRAT1Q6PIZ9 186 aa8.4□□□□□ -1.07
CCDC90B-214ENST00000529689 DNM1P46Q6ZS02 220 aa8.4□□□□□ -1.07
CCDC90B-214ENST00000529689 C1QTNF5Q9BXJ0 243 aa8.4□□□□□ -1.07
CCDC90B-214ENST00000529689 ZNF703Q9H7S9 590 aaPredicted RBP8.4□□□□□ -1.07
CCDC90B-214ENST00000529689 PXMP4Q9Y6I8 212 aa8.4□□□□□ -1.07
CCDC90B-214ENST00000529689 YLPM1P49750 1951 aaKnown RBP8.4□□□□□ -1.07
CCDC90B-214ENST00000529689 B4E171 279 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 PRB4P10163 310 aaPredicted RBP8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 TSPAN7P41732 249 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 FAM214BQ7L5A3 538 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 GGNQ86UU5 652 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 VAMP8Q9BV40 100 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 WDR61Q9GZS3 305 aaKnown RBP8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 NCOR2Q9Y618 2525 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 LOC102723971A0A1B0GUV8 181 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 C1QTNF9BB2RNN3 333 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 HRASP01112 189 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 CYB5R2Q6BCY4 276 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 C20orf204Q6ZNR8 217 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 SSX7Q7RTT5 188 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 CLDND2Q8NHS1 167 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 OR2V2Q96R30 315 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 ELOVL1Q9BW60 279 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 IGLV3-32A0A0A0MS00 114 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 H3BTX0 84 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 HIST1H2BKO60814 126 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 HIST1H2BJP06899 126 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 GZMHP20718 246 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 HIST1H2BOP23527 126 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 COX7A1P24310 79 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 HIST1H2BBP33778 126 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 HIST1H2BDP58876 126 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 HIST1H2BCP62807 126 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 ID3Q02535 119 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 HIST2H2BEQ16778 126 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 MOB3BQ86TA1 216 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 HIST1H2BHQ93079 126 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 TBX15Q96SF7 602 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 HIST1H2BNQ99877 126 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 HIST1H2BMQ99879 126 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 SMDT1Q9H4I9 107 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 HES4Q9HCC6 221 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 ARL2-SNX15V9GYD0 113 aa8.39□□□□□ -1.07
CCDC90B-214ENST00000529689 ELOA3CA0A087WX78 387 aaPredicted RBP8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 PRRG2O14669 202 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 CSN3P07498 182 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 RNF224P0DH78 156 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 HOXA6P31267 233 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 MPV17P39210 176 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 TPPP2P59282 170 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 UBE2L3P68036 154 aaKnown RBP8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 ZNF506Q5JVG8 444 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 VWA1Q6PCB0 445 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 Q6ZRM9 215 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 OR4D5Q8NGN0 318 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 OR4S2Q8NH73 311 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 ITLN1Q8WWA0 313 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 IMMP2LQ96T52 175 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 QTRT1Q9BXR0 403 aaKnown RBP8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 SH2D2AQ9NP31 389 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 WIPI2Q9Y4P8 454 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 MUC3AQ02505 3323 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 J3QR06 171 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 TMEM50AO95807 157 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 Q0VFX4 171 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 RNASEKQ6P5S7 137 aaKnown RBP8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 EGLN1Q9GZT9 426 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 MANBALQ9NQG1 85 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 TNCP24821 2201 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 CFAP54Q96N23 3096 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 SLC17A3O00476 420 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 GATA2P23769 480 aaPredicted RBP8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 DDTP30046 118 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 CHRNB4P30926 498 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 ATP5G3P48201 142 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 PRB3Q04118 309 aaPredicted RBP8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 OR13A1Q8NGR1 328 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 CORO2AQ92828 525 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 LOC102723996A0A087X1L8 192 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 C5orf52A6NGY3 159 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 FAM157AC9JC47 383 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 ARL14EPLP0DKL9 152 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 PAX6P26367 422 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 CNN1P51911 297 aaKnown RBP8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 ZNF525Q8N782 197 aa8.38□□□□□ -1.07
CCDC90B-214ENST00000529689 OR1P1Q8NH06 330 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms