RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 LAX1Q8IWV1 398 aa12.63□□□□□ -0.39
TSPAN4-218ENST00000529566 MINDY2Q8NBR6 621 aa12.63□□□□□ -0.39
TSPAN4-218ENST00000529566 R3HDM4Q96D70 268 aa12.63□□□□□ -0.39
TSPAN4-218ENST00000529566 SLIRPQ9GZT3 109 aaKnown RBP12.63□□□□□ -0.39
TSPAN4-218ENST00000529566 RBM38Q9H0Z9 239 aaKnown RBP12.63□□□□□ -0.39
TSPAN4-218ENST00000529566 EXTL2Q9UBQ6 330 aa12.63□□□□□ -0.39
TSPAN4-218ENST00000529566 WSB1Q9Y6I7 421 aa12.63□□□□□ -0.39
TSPAN4-218ENST00000529566 VDAC1P21796 283 aa12.62□□□□□ -0.39
TSPAN4-218ENST00000529566 PSMB8P28062 276 aa12.62□□□□□ -0.39
TSPAN4-218ENST00000529566 HLA-DMAP28067 261 aa12.62□□□□□ -0.39
TSPAN4-218ENST00000529566 TAS2R46P59540 309 aa12.62□□□□□ -0.39
TSPAN4-218ENST00000529566 RPL23AP62750 156 aaKnown RBP12.62□□□□□ -0.39
TSPAN4-218ENST00000529566 PJVKQ0ZLH3 352 aa12.62□□□□□ -0.39
TSPAN4-218ENST00000529566 PLGLAQ15195 96 aa12.62□□□□□ -0.39
TSPAN4-218ENST00000529566 LCNL1Q6ZST4 164 aa12.62□□□□□ -0.39
TSPAN4-218ENST00000529566 C18orf65Q6ZTR6 163 aa12.62□□□□□ -0.39
TSPAN4-218ENST00000529566 MFSD4AQ8N468 514 aa12.62□□□□□ -0.39
TSPAN4-218ENST00000529566 OR4F17Q8NGA8 305 aa12.62□□□□□ -0.39
TSPAN4-218ENST00000529566 SECTM1Q8WVN6 248 aa12.62□□□□□ -0.39
TSPAN4-218ENST00000529566 HARBI1Q96MB7 349 aa12.62□□□□□ -0.39
TSPAN4-218ENST00000529566 OR4F4Q96R69 305 aa12.62□□□□□ -0.39
TSPAN4-218ENST00000529566 CLCC1Q96S66 551 aa12.62□□□□□ -0.39
TSPAN4-218ENST00000529566 GPHA2Q96T91 129 aa12.62□□□□□ -0.39
TSPAN4-218ENST00000529566 HSD17B10Q99714 261 aaKnown RBP12.62□□□□□ -0.39
TSPAN4-218ENST00000529566 PARP11Q9NR21 331 aa12.62□□□□□ -0.39
TSPAN4-218ENST00000529566 ZFP57Q9NU63 452 aa12.62□□□□□ -0.39
TSPAN4-218ENST00000529566 EHFQ9NZC4 300 aa12.62□□□□□ -0.39
TSPAN4-218ENST00000529566 NUBP2Q9Y5Y2 271 aa12.62□□□□□ -0.39
TSPAN4-218ENST00000529566 ARPC1BO15143 372 aaKnown RBP12.61□□□□□ -0.39
TSPAN4-218ENST00000529566 SHOXO15266 292 aa12.61□□□□□ -0.39
TSPAN4-218ENST00000529566 CRYZL1O95825 349 aa12.61□□□□□ -0.39
TSPAN4-218ENST00000529566 CA2P00918 260 aa12.61□□□□□ -0.39
TSPAN4-218ENST00000529566 IGLV1-40P01703 118 aa12.61□□□□□ -0.39
TSPAN4-218ENST00000529566 RPLP1P05386 114 aaKnown RBP12.61□□□□□ -0.39
TSPAN4-218ENST00000529566 ELANEP08246 267 aa12.61□□□□□ -0.39
TSPAN4-218ENST00000529566 HRH1P35367 487 aa12.61□□□□□ -0.39
TSPAN4-218ENST00000529566 KIAA0141Q14154 515 aaPredicted RBP12.61□□□□□ -0.39
TSPAN4-218ENST00000529566 ZNF66Q6ZN08 573 aa12.61□□□□□ -0.39
TSPAN4-218ENST00000529566 KCTD9Q7L273 389 aa12.61□□□□□ -0.39
TSPAN4-218ENST00000529566 PPP1R27Q86WC6 154 aa12.61□□□□□ -0.39
TSPAN4-218ENST00000529566 ZBTB34Q8NCN2 500 aa12.61□□□□□ -0.39
TSPAN4-218ENST00000529566 OR5H2Q8NGV7 314 aa12.61□□□□□ -0.39
TSPAN4-218ENST00000529566 OR52I2Q8NH67 350 aa12.61□□□□□ -0.39
TSPAN4-218ENST00000529566 MYOZ3Q8TDC0 251 aa12.61□□□□□ -0.39
TSPAN4-218ENST00000529566 SLC5A7Q9GZV3 580 aa12.61□□□□□ -0.39
TSPAN4-218ENST00000529566 NXF2Q9GZY0 626 aaKnown RBP12.61□□□□□ -0.39
TSPAN4-218ENST00000529566 KLK11Q9UBX7 282 aa12.61□□□□□ -0.39
TSPAN4-218ENST00000529566 NOTCH1P46531 2555 aa12.61□□□□□ -0.39
TSPAN4-218ENST00000529566 NOTCH3Q9UM47 2321 aa12.6□□□□□ -0.39
TSPAN4-218ENST00000529566 MEGF8Q7Z7M0 2845 aa12.6□□□□□ -0.39
TSPAN4-218ENST00000529566 TNCP24821 2201 aa12.6□□□□□ -0.39
TSPAN4-218ENST00000529566 TRAV41A0A0B4J266 112 aa12.6□□□□□ -0.39
TSPAN4-218ENST00000529566 RGS5O15539 181 aa12.6□□□□□ -0.39
TSPAN4-218ENST00000529566 FCGR3BO75015 233 aa12.6□□□□□ -0.39
TSPAN4-218ENST00000529566 GNRHRP30968 328 aa12.6□□□□□ -0.39
TSPAN4-218ENST00000529566 RCVRNP35243 200 aa12.6□□□□□ -0.39
TSPAN4-218ENST00000529566 FXYD4P59646 89 aa12.6□□□□□ -0.39
TSPAN4-218ENST00000529566 UBE2KP61086 200 aa12.6□□□□□ -0.39
TSPAN4-218ENST00000529566 ZNF818PQ6ZRF7 136 aa12.6□□□□□ -0.39
TSPAN4-218ENST00000529566 OSR1Q8TAX0 266 aaPredicted RBP12.6□□□□□ -0.39
TSPAN4-218ENST00000529566 MOB3AQ96BX8 217 aa12.6□□□□□ -0.39
TSPAN4-218ENST00000529566 ZNF2Q9BSG1 426 aaPredicted RBP12.6□□□□□ -0.39
TSPAN4-218ENST00000529566 KLK15Q9H2R5 256 aa12.6□□□□□ -0.39
TSPAN4-218ENST00000529566 TAS2R8Q9NYW2 309 aa12.6□□□□□ -0.39
TSPAN4-218ENST00000529566 PRELID3BQ9Y3B1 194 aa12.6□□□□□ -0.39
TSPAN4-218ENST00000529566 TNFSF12O43508 249 aa12.59□□□□□ -0.39
TSPAN4-218ENST00000529566 SOX15O60248 233 aa12.59□□□□□ -0.39
TSPAN4-218ENST00000529566 NOL3O60936 208 aaKnown RBP12.59□□□□□ -0.39
TSPAN4-218ENST00000529566 CBX3Q13185 183 aa12.59□□□□□ -0.39
TSPAN4-218ENST00000529566 OR2B11Q5JQS5 317 aa12.59□□□□□ -0.39
TSPAN4-218ENST00000529566 KHDC1LQ5JSQ8 128 aa12.59□□□□□ -0.39
TSPAN4-218ENST00000529566 ETV3LQ6ZN32 361 aa12.59□□□□□ -0.39
TSPAN4-218ENST00000529566 TEX45Q8NA69 505 aa12.59□□□□□ -0.39
TSPAN4-218ENST00000529566 WFDC9Q8NEX5 89 aa12.59□□□□□ -0.39
TSPAN4-218ENST00000529566 TCTEX1D2Q8WW35 142 aa12.59□□□□□ -0.39
TSPAN4-218ENST00000529566 MTFP1Q9UDX5 166 aa12.59□□□□□ -0.39
TSPAN4-218ENST00000529566 CDX1P47902 265 aaPredicted RBP12.58□□□□□ -0.4
TSPAN4-218ENST00000529566 HERV-K104P61576 105 aa12.58□□□□□ -0.4
TSPAN4-218ENST00000529566 FXYD3Q14802 87 aa12.58□□□□□ -0.4
TSPAN4-218ENST00000529566 PRSS8Q16651 343 aa12.58□□□□□ -0.4
TSPAN4-218ENST00000529566 AKIRIN2Q53H80 203 aa12.58□□□□□ -0.4
TSPAN4-218ENST00000529566 CXorf66Q5JRM2 361 aaPredicted RBP12.58□□□□□ -0.4
TSPAN4-218ENST00000529566 VAX1Q5SQQ9 334 aa12.58□□□□□ -0.4
TSPAN4-218ENST00000529566 IDO2Q6ZQW0 420 aa12.58□□□□□ -0.4
TSPAN4-218ENST00000529566 TMEM17Q86X19 198 aa12.58□□□□□ -0.4
TSPAN4-218ENST00000529566 OR6F1Q8NGZ6 308 aa12.58□□□□□ -0.4
TSPAN4-218ENST00000529566 C15orf40Q8WUR7 153 aa12.58□□□□□ -0.4
TSPAN4-218ENST00000529566 SOSTQ9BQB4 213 aa12.58□□□□□ -0.4
TSPAN4-218ENST00000529566 FAM103A1Q9BTL3 118 aaKnown RBP12.58□□□□□ -0.4
TSPAN4-218ENST00000529566 FXYD6Q9H0Q3 95 aa12.58□□□□□ -0.4
TSPAN4-218ENST00000529566 RAMP3O60896 148 aa12.57□□□□□ -0.4
TSPAN4-218ENST00000529566 SAA1P0DJI8 122 aaPredicted RBP12.57□□□□□ -0.4
TSPAN4-218ENST00000529566 SLC6A1P30531 599 aa12.57□□□□□ -0.4
TSPAN4-218ENST00000529566 DGCR2P98153 550 aa12.57□□□□□ -0.4
TSPAN4-218ENST00000529566 ECSCRQ19T08 205 aa12.57□□□□□ -0.4
TSPAN4-218ENST00000529566 VMA21Q3ZAQ7 101 aa12.57□□□□□ -0.4
TSPAN4-218ENST00000529566 RNASE12Q5GAN4 147 aaKnown RBP12.57□□□□□ -0.4
TSPAN4-218ENST00000529566 C8orf86Q6ZUL3 223 aa12.57□□□□□ -0.4
TSPAN4-218ENST00000529566 ZNF695Q8IW36 515 aa12.57□□□□□ -0.4
TSPAN4-218ENST00000529566 LFNGQ8NES3 379 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms