RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 TP53BP1Q12888 1972 aaPredicted RBP2.39□□□□□ -2.03
CD44-229ENST00000528672 ADAMTS12P58397 1594 aa2.39□□□□□ -2.03
CD44-229ENST00000528672 LRRK1Q38SD2 2015 aa2.39□□□□□ -2.03
CD44-229ENST00000528672 CCDC88BA6NC98 1476 aa2.39□□□□□ -2.03
CD44-229ENST00000528672 DENND4BO75064 1496 aaPredicted RBP2.39□□□□□ -2.03
CD44-229ENST00000528672 DICER1Q9UPY3 1922 aaKnown RBP2.38□□□□□ -2.03
CD44-229ENST00000528672 LOC102724200A0A096LPH7 203 aaPredicted RBP2.38□□□□□ -2.03
CD44-229ENST00000528672 KLF18A0A0U1RQI7 1052 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 LOC102725191A0A1B0GVB3 256 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 DUXBA0A1W2PPF3 345 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 FAM168BA1KXE4 195 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 EEF1E1-BLOC1S5C9J1V9 151 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 D6RAR5 112 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.38□□□□□ -2.03
CD44-229ENST00000528672 XKRYO14609 159 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 EEF1E1O43324 174 aaKnown RBP2.38□□□□□ -2.03
CD44-229ENST00000528672 UPK1BO75841 260 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 SNAPC5O75971 98 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 MT-ND4LP03901 98 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 MAS1P04201 325 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 CSN2P05814 226 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 SPNP16150 400 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 ZNF19P17023 458 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 GGT1P19440 569 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 ATP6V0CP27449 155 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 CTRLP40313 264 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 GNG4P50150 75 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 LHX2P50458 406 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 POLR2HP52434 150 aaKnown RBP2.38□□□□□ -2.03
CD44-229ENST00000528672 AKR1C2P52895 323 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 TMBIM6P55061 237 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 AQP4P55087 323 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 TAS2R20P59543 309 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 S100A10P60903 97 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 HOXC5Q00444 222 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 MEF2BQ02080 365 aaPredicted RBP2.38□□□□□ -2.03
CD44-229ENST00000528672 TROQ12816 1431 aaPredicted RBP2.38□□□□□ -2.03
CD44-229ENST00000528672 PMAIP1Q13794 54 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 PEA15Q15121 130 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 PDGFRLQ15198 375 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 ZNF726P1Q15940 193 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 CEACAM16Q2WEN9 425 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 LRRC10Q5BKY1 277 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 PAGE3Q5JUK9 113 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 C10orf91Q5T1B1 145 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 GLT8D1Q68CQ7 371 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 GTSCR1Q86UQ5 136 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 OOSP2Q86WS3 158 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 GKN2Q86XP6 184 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 CEND1Q8N111 149 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 TMEM86AQ8N2M4 240 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 SVBPQ8N300 66 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 CD177Q8N6Q3 437 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 ZNF615Q8N8J6 731 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 COX18Q8N8Q8 333 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 C5orf17Q8NAS9 161 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 TMEM229BQ8NBD8 167 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 GPR26Q8NDV2 337 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 OR8D4Q8NGM9 314 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 OR1L1Q8NH94 360 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 BLNKQ8WV28 456 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 MBD3L1Q8WWY6 194 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 PP6455Q8WZ26 134 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 TSPAN32Q96QS1 320 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 HSD17B10Q99714 261 aaKnown RBP2.38□□□□□ -2.03
CD44-229ENST00000528672 MIEN1Q9BRT3 115 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 ANAPC13Q9BS18 74 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 ADAT1Q9BUB4 502 aaKnown RBP2.38□□□□□ -2.03
CD44-229ENST00000528672 GABARAPL3Q9BY60 117 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 OR2H1Q9GZK4 316 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 OR8D2Q9GZM6 311 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 TMEM222Q9H0R3 208 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 OR2D2Q9H210 308 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 IFI27L2Q9H2X8 130 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 OR52D1Q9H346 318 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 KIAA1551Q9HCM1 1747 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 PRTFDC1Q9NRG1 225 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 CCL28Q9NRJ3 127 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 CBLN4Q9NTU7 201 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 RBM22Q9NW64 420 aaKnown RBP eCLIP2.38□□□□□ -2.03
CD44-229ENST00000528672 COMMD9Q9P000 198 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 ANXA10Q9UJ72 324 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 TBX21Q9UL17 535 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 BTRCQ9Y297 605 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 NEUROG3Q9Y4Z2 214 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 NESP48681 1621 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 TOP2BQ02880 1626 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 KIF13AQ9H1H9 1805 aa2.38□□□□□ -2.03
CD44-229ENST00000528672 AKAP11Q9UKA4 1901 aa2.37□□□□□ -2.03
CD44-229ENST00000528672 OVOS2A0A0G2JMS6 1433 aa2.37□□□□□ -2.03
CD44-229ENST00000528672 PLCH2O75038 1416 aa2.37□□□□□ -2.03
CD44-229ENST00000528672 CASZ1Q86V15 1759 aa2.37□□□□□ -2.03
CD44-229ENST00000528672 FAM240AA0A1B0GVK7 77 aa2.37□□□□□ -2.03
CD44-229ENST00000528672 hADV38S2A0JD32 116 aa2.37□□□□□ -2.03
CD44-229ENST00000528672 MYBPHLA2RUH7 354 aa2.37□□□□□ -2.03
CD44-229ENST00000528672 EPOPA6NHQ4 379 aa2.37□□□□□ -2.03
CD44-229ENST00000528672 ZFP92A6NM28 416 aa2.37□□□□□ -2.03
CD44-229ENST00000528672 ZNF850A8MQ14 1090 aa2.37□□□□□ -2.03
CD44-229ENST00000528672 H7C1C5 153 aa2.37□□□□□ -2.03
CD44-229ENST00000528672 BCL2L11O43521 198 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms