RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 PPP1R27Q86WC6 154 aa13.16□□□□□ -0.3
HIF3A-211ENST00000528563 CLCC1Q96S66 551 aa13.16□□□□□ -0.3
HIF3A-211ENST00000528563 HSD17B10Q99714 261 aaKnown RBP13.16□□□□□ -0.3
HIF3A-211ENST00000528563 BCL7BQ9BQE9 202 aa13.16□□□□□ -0.3
HIF3A-211ENST00000528563 SCPEP1Q9HB40 452 aa13.16□□□□□ -0.3
HIF3A-211ENST00000528563 TPSG1Q9NRR2 321 aa13.16□□□□□ -0.3
HIF3A-211ENST00000528563 TNCP24821 2201 aa13.16□□□□□ -0.3
HIF3A-211ENST00000528563 SHOXO15266 292 aa13.16□□□□□ -0.3
HIF3A-211ENST00000528563 CDX1P47902 265 aaPredicted RBP13.16□□□□□ -0.3
HIF3A-211ENST00000528563 BRWD1-AS2P59051 145 aa13.16□□□□□ -0.3
HIF3A-211ENST00000528563 PJVKQ0ZLH3 352 aa13.16□□□□□ -0.3
HIF3A-211ENST00000528563 CBX3Q13185 183 aa13.16□□□□□ -0.3
HIF3A-211ENST00000528563 MSMO1Q15800 293 aa13.16□□□□□ -0.3
HIF3A-211ENST00000528563 SNX29P2Q8IUI4 249 aa13.16□□□□□ -0.3
HIF3A-211ENST00000528563 ZNF695Q8IW36 515 aa13.16□□□□□ -0.3
HIF3A-211ENST00000528563 HARBI1Q96MB7 349 aa13.16□□□□□ -0.3
HIF3A-211ENST00000528563 KLK15Q9H2R5 256 aa13.16□□□□□ -0.3
HIF3A-211ENST00000528563 CCL28Q9NRJ3 127 aa13.16□□□□□ -0.3
HIF3A-211ENST00000528563 ADAM30Q9UKF2 790 aa13.16□□□□□ -0.3
HIF3A-211ENST00000528563 TPPPO94811 219 aa13.15□□□□□ -0.3
HIF3A-211ENST00000528563 CRYZL1O95825 349 aa13.15□□□□□ -0.3
HIF3A-211ENST00000528563 SSBP2P81877 361 aaPredicted RBP13.15□□□□□ -0.3
HIF3A-211ENST00000528563 DYRK1AQ13627 763 aa13.15□□□□□ -0.3
HIF3A-211ENST00000528563 KIAA0141Q14154 515 aaPredicted RBP13.15□□□□□ -0.3
HIF3A-211ENST00000528563 MRGPRG-AS1Q2M3A8 158 aa13.15□□□□□ -0.3
HIF3A-211ENST00000528563 MFSD4AQ8N468 514 aa13.15□□□□□ -0.3
HIF3A-211ENST00000528563 OSR1Q8TAX0 266 aaPredicted RBP13.15□□□□□ -0.3
HIF3A-211ENST00000528563 MYOZ3Q8TDC0 251 aa13.15□□□□□ -0.3
HIF3A-211ENST00000528563 SECTM1Q8WVN6 248 aa13.15□□□□□ -0.3
HIF3A-211ENST00000528563 PRELID3BQ9Y3B1 194 aa13.15□□□□□ -0.3
HIF3A-211ENST00000528563 FAM25AB3EWG3 89 aa13.14□□□□□ -0.31
HIF3A-211ENST00000528563 FAM25CB3EWG5 89 aa13.14□□□□□ -0.31
HIF3A-211ENST00000528563 FAM25GB3EWG6 89 aa13.14□□□□□ -0.31
HIF3A-211ENST00000528563 SULT1C2O00338 296 aa13.14□□□□□ -0.31
HIF3A-211ENST00000528563 CTDSP2O14595 271 aa13.14□□□□□ -0.31
HIF3A-211ENST00000528563 ARPC1BO15143 372 aaKnown RBP13.14□□□□□ -0.31
HIF3A-211ENST00000528563 FCGR3BO75015 233 aa13.14□□□□□ -0.31
HIF3A-211ENST00000528563 CA2P00918 260 aa13.14□□□□□ -0.31
HIF3A-211ENST00000528563 PMP2P02689 132 aa13.14□□□□□ -0.31
HIF3A-211ENST00000528563 TAS2R46P59540 309 aa13.14□□□□□ -0.31
HIF3A-211ENST00000528563 TMEM267Q0VDI3 215 aaPredicted RBP13.14□□□□□ -0.31
HIF3A-211ENST00000528563 AKIRIN2Q53H80 203 aa13.14□□□□□ -0.31
HIF3A-211ENST00000528563 ZNF66Q6ZN08 573 aa13.14□□□□□ -0.31
HIF3A-211ENST00000528563 ETV3LQ6ZN32 361 aa13.14□□□□□ -0.31
HIF3A-211ENST00000528563 KCTD9Q7L273 389 aa13.14□□□□□ -0.31
HIF3A-211ENST00000528563 TEX45Q8NA69 505 aa13.14□□□□□ -0.31
HIF3A-211ENST00000528563 ZBTB34Q8NCN2 500 aa13.14□□□□□ -0.31
HIF3A-211ENST00000528563 DYNC2LI1Q8TCX1 351 aa13.14□□□□□ -0.31
HIF3A-211ENST00000528563 SLC5A7Q9GZV3 580 aa13.14□□□□□ -0.31
HIF3A-211ENST00000528563 MIXL1Q9H2W2 232 aa13.14□□□□□ -0.31
HIF3A-211ENST00000528563 EHFQ9NZC4 300 aa13.14□□□□□ -0.31
HIF3A-211ENST00000528563 NUDT19A8MXV4 375 aa13.13□□□□□ -0.31
HIF3A-211ENST00000528563 G3V4G9 280 aa13.13□□□□□ -0.31
HIF3A-211ENST00000528563 SOX15O60248 233 aa13.13□□□□□ -0.31
HIF3A-211ENST00000528563 PF4P02776 101 aa13.13□□□□□ -0.31
HIF3A-211ENST00000528563 UBE2KP61086 200 aa13.13□□□□□ -0.31
HIF3A-211ENST00000528563 DEFA6Q01524 100 aa13.13□□□□□ -0.31
HIF3A-211ENST00000528563 FXYD3Q14802 87 aa13.13□□□□□ -0.31
HIF3A-211ENST00000528563 SAMD5Q5TGI4 173 aa13.13□□□□□ -0.31
HIF3A-211ENST00000528563 C8orf86Q6ZUL3 223 aa13.13□□□□□ -0.31
HIF3A-211ENST00000528563 KLHL30-AS1Q8NEE0 82 aa13.13□□□□□ -0.31
HIF3A-211ENST00000528563 OR5H2Q8NGV7 314 aa13.13□□□□□ -0.31
HIF3A-211ENST00000528563 ABHD1Q96SE0 405 aa13.13□□□□□ -0.31
HIF3A-211ENST00000528563 GPHA2Q96T91 129 aa13.13□□□□□ -0.31
HIF3A-211ENST00000528563 FAM103A1Q9BTL3 118 aaKnown RBP13.13□□□□□ -0.31
HIF3A-211ENST00000528563 TAS2R8Q9NYW2 309 aa13.13□□□□□ -0.31
HIF3A-211ENST00000528563 HLA-DMAP28067 261 aa13.12□□□□□ -0.31
HIF3A-211ENST00000528563 GNRHRP30968 328 aa13.12□□□□□ -0.31
HIF3A-211ENST00000528563 MYCNOSP40205 109 aa13.12□□□□□ -0.31
HIF3A-211ENST00000528563 RAB9AP51151 201 aa13.12□□□□□ -0.31
HIF3A-211ENST00000528563 FXYD4P59646 89 aa13.12□□□□□ -0.31
HIF3A-211ENST00000528563 ECSCRQ19T08 205 aa13.12□□□□□ -0.31
HIF3A-211ENST00000528563 OXLD1Q5BKU9 147 aa13.12□□□□□ -0.31
HIF3A-211ENST00000528563 TMEM65Q6PI78 240 aa13.12□□□□□ -0.31
HIF3A-211ENST00000528563 C1QL4Q86Z23 238 aa13.12□□□□□ -0.31
HIF3A-211ENST00000528563 TCTEX1D1Q8N7M0 179 aa13.12□□□□□ -0.31
HIF3A-211ENST00000528563 ZNF491Q8N8L2 437 aa13.12□□□□□ -0.31
HIF3A-211ENST00000528563 LFNGQ8NES3 379 aa13.12□□□□□ -0.31
HIF3A-211ENST00000528563 TCTEX1D2Q8WW35 142 aa13.12□□□□□ -0.31
HIF3A-211ENST00000528563 ARPC1AQ92747 370 aa13.12□□□□□ -0.31
HIF3A-211ENST00000528563 P2RX4Q99571 388 aa13.12□□□□□ -0.31
HIF3A-211ENST00000528563 EXTL2Q9UBQ6 330 aa13.12□□□□□ -0.31
HIF3A-211ENST00000528563 SCOCQ9UIL1 159 aa13.12□□□□□ -0.31
HIF3A-211ENST00000528563 FOXA2Q9Y261 457 aaPredicted RBP13.12□□□□□ -0.31
HIF3A-211ENST00000528563 A3GALT2U3KPV4 340 aa13.12□□□□□ -0.31
HIF3A-211ENST00000528563 H3BMQ9 156 aa13.11□□□□□ -0.31
HIF3A-211ENST00000528563 CD33P20138 364 aa13.11□□□□□ -0.31
HIF3A-211ENST00000528563 HRH1P35367 487 aa13.11□□□□□ -0.31
HIF3A-211ENST00000528563 PRSS8Q16651 343 aa13.11□□□□□ -0.31
HIF3A-211ENST00000528563 VMA21Q3ZAQ7 101 aa13.11□□□□□ -0.31
HIF3A-211ENST00000528563 OR2B11Q5JQS5 317 aa13.11□□□□□ -0.31
HIF3A-211ENST00000528563 KPRPQ5T749 579 aaPredicted RBP13.11□□□□□ -0.31
HIF3A-211ENST00000528563 UNQ5815/PRO19632Q6UWF5 114 aa13.11□□□□□ -0.31
HIF3A-211ENST00000528563 ZNF818PQ6ZRF7 136 aa13.11□□□□□ -0.31
HIF3A-211ENST00000528563 MRPL41Q8IXM3 137 aaKnown RBP13.11□□□□□ -0.31
HIF3A-211ENST00000528563 LINC00482Q8N8I6 264 aa13.11□□□□□ -0.31
HIF3A-211ENST00000528563 OR6F1Q8NGZ6 308 aa13.11□□□□□ -0.31
HIF3A-211ENST00000528563 ABHD5Q8WTS1 349 aa13.11□□□□□ -0.31
HIF3A-211ENST00000528563 MOB3AQ96BX8 217 aa13.11□□□□□ -0.31
HIF3A-211ENST00000528563 ISOC1Q96CN7 298 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms