RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 AMBNQ9NP70 447 aa11.96□□□□□ -0.49
CHMP4A-203ENST00000527154 GHRLQ9UBU3 117 aa11.96□□□□□ -0.49
CHMP4A-203ENST00000527154 CRTAPO75718 401 aaPredicted RBP11.95□□□□□ -0.5
CHMP4A-203ENST00000527154 SCAF4O95104 1147 aaKnown RBP11.95□□□□□ -0.5
CHMP4A-203ENST00000527154 APELAP0DMC3 54 aa11.95□□□□□ -0.5
CHMP4A-203ENST00000527154 ZBTB25P24278 435 aa11.95□□□□□ -0.5
CHMP4A-203ENST00000527154 NANOS2P60321 138 aaKnown RBP11.95□□□□□ -0.5
CHMP4A-203ENST00000527154 Q499Y3 187 aa11.95□□□□□ -0.5
CHMP4A-203ENST00000527154 JAGN1Q8N5M9 183 aa11.95□□□□□ -0.5
CHMP4A-203ENST00000527154 STPG3Q8N7X2 389 aa11.95□□□□□ -0.5
CHMP4A-203ENST00000527154 TEX45Q8NA69 505 aa11.95□□□□□ -0.5
CHMP4A-203ENST00000527154 PYDC1Q8WXC3 89 aa11.95□□□□□ -0.5
CHMP4A-203ENST00000527154 HARBI1Q96MB7 349 aa11.95□□□□□ -0.5
CHMP4A-203ENST00000527154 CCDC140Q96MF4 163 aa11.95□□□□□ -0.5
CHMP4A-203ENST00000527154 FAAP24Q9BTP7 215 aa11.95□□□□□ -0.5
CHMP4A-203ENST00000527154 CIB2O75838 187 aa11.94□□□□□ -0.5
CHMP4A-203ENST00000527154 CEACAM6P40199 344 aa11.94□□□□□ -0.5
CHMP4A-203ENST00000527154 RBMS2Q15434 407 aaKnown RBP11.94□□□□□ -0.5
CHMP4A-203ENST00000527154 ODF3L2Q3SX64 289 aa11.94□□□□□ -0.5
CHMP4A-203ENST00000527154 BTNL8Q6UX41 500 aa11.94□□□□□ -0.5
CHMP4A-203ENST00000527154 C6orf201Q7Z4U5 140 aa11.94□□□□□ -0.5
CHMP4A-203ENST00000527154 OR2C3Q8N628 320 aa11.94□□□□□ -0.5
CHMP4A-203ENST00000527154 OR1L6Q8NGR2 347 aa11.94□□□□□ -0.5
CHMP4A-203ENST00000527154 RHOXF1Q8NHV9 184 aa11.94□□□□□ -0.5
CHMP4A-203ENST00000527154 FBLIM1Q8WUP2 373 aa11.94□□□□□ -0.5
CHMP4A-203ENST00000527154 MARC2Q969Z3 335 aa11.94□□□□□ -0.5
CHMP4A-203ENST00000527154 PGLYRP3Q96LB9 341 aa11.94□□□□□ -0.5
CHMP4A-203ENST00000527154 SPAG8Q99932 426 aaPredicted RBP11.94□□□□□ -0.5
CHMP4A-203ENST00000527154 UQCC2Q9BRT2 126 aa11.94□□□□□ -0.5
CHMP4A-203ENST00000527154 MAP6D1Q9H9H5 199 aa11.94□□□□□ -0.5
CHMP4A-203ENST00000527154 CKLFQ9UBR5 152 aa11.94□□□□□ -0.5
CHMP4A-203ENST00000527154 EXOSC1Q9Y3B2 195 aaKnown RBP11.94□□□□□ -0.5
CHMP4A-203ENST00000527154 SELENOKQ9Y6D0 94 aa11.94□□□□□ -0.5
CHMP4A-203ENST00000527154 IGKV1-6A0A0C4DH72 117 aa11.93□□□□□ -0.5
CHMP4A-203ENST00000527154 LALBAP00709 142 aa11.93□□□□□ -0.5
CHMP4A-203ENST00000527154 UBE2KP61086 200 aa11.93□□□□□ -0.5
CHMP4A-203ENST00000527154 HLA-DRB3P79483 266 aa11.93□□□□□ -0.5
CHMP4A-203ENST00000527154 TAGLNQ01995 201 aaKnown RBP11.93□□□□□ -0.5
CHMP4A-203ENST00000527154 YIF1BQ5BJH7 314 aa11.93□□□□□ -0.5
CHMP4A-203ENST00000527154 GLT8D1Q68CQ7 371 aa11.93□□□□□ -0.5
CHMP4A-203ENST00000527154 OR4A47Q6IF82 309 aa11.93□□□□□ -0.5
CHMP4A-203ENST00000527154 C11orf45Q8TAV5 145 aa11.93□□□□□ -0.5
CHMP4A-203ENST00000527154 Q96MT0 163 aa11.93□□□□□ -0.5
CHMP4A-203ENST00000527154 NEDD4LQ96PU5 975 aa11.93□□□□□ -0.5
CHMP4A-203ENST00000527154 PHB2Q99623 299 aa11.93□□□□□ -0.5
CHMP4A-203ENST00000527154 TM2D1Q9BX74 207 aa11.93□□□□□ -0.5
CHMP4A-203ENST00000527154 RIMS4Q9H426 269 aaPredicted RBP11.93□□□□□ -0.5
CHMP4A-203ENST00000527154 FGF20Q9NP95 211 aaPredicted RBP11.93□□□□□ -0.5
CHMP4A-203ENST00000527154 ZNF221Q9UK13 617 aa11.93□□□□□ -0.5
CHMP4A-203ENST00000527154 PRSS29PA6NIE9 313 aa11.92□□□□□ -0.5
CHMP4A-203ENST00000527154 OR2J3O76001 311 aa11.92□□□□□ -0.5
CHMP4A-203ENST00000527154 IFNA4P05014 189 aa11.92□□□□□ -0.5
CHMP4A-203ENST00000527154 CBR4Q8N4T8 237 aa11.92□□□□□ -0.5
CHMP4A-203ENST00000527154 C5orf30Q96GV9 206 aa11.92□□□□□ -0.5
CHMP4A-203ENST00000527154 FANCD2OSQ96PS1 177 aa11.92□□□□□ -0.5
CHMP4A-203ENST00000527154 C5orf66Q9H5L9 145 aa11.92□□□□□ -0.5
CHMP4A-203ENST00000527154 M0R1X1 148 aa11.91□□□□□ -0.5
CHMP4A-203ENST00000527154 TSPAN4O14817 238 aa11.91□□□□□ -0.5
CHMP4A-203ENST00000527154 GALP22466 123 aa11.91□□□□□ -0.5
CHMP4A-203ENST00000527154 HTR2CP28335 458 aa11.91□□□□□ -0.5
CHMP4A-203ENST00000527154 FCGR2BP31994 310 aaPredicted RBP11.91□□□□□ -0.5
CHMP4A-203ENST00000527154 RPS27AP62979 156 aaKnown RBP11.91□□□□□ -0.5
CHMP4A-203ENST00000527154 TNXAQ16473 311 aa11.91□□□□□ -0.5
CHMP4A-203ENST00000527154 FAM106AQ4KMX7 169 aa11.91□□□□□ -0.5
CHMP4A-203ENST00000527154 NKAIN3Q8N8D7 197 aa11.91□□□□□ -0.5
CHMP4A-203ENST00000527154 ZNF485Q8NCK3 441 aa11.91□□□□□ -0.5
CHMP4A-203ENST00000527154 SLC29A1Q99808 456 aa11.91□□□□□ -0.5
CHMP4A-203ENST00000527154 SPIN2AQ99865 258 aa11.91□□□□□ -0.5
CHMP4A-203ENST00000527154 SPIN2BQ9BPZ2 258 aa11.91□□□□□ -0.5
CHMP4A-203ENST00000527154 BABAM2Q9NXR7 383 aa11.91□□□□□ -0.5
CHMP4A-203ENST00000527154 MRPL27Q9P0M9 148 aaKnown RBP11.91□□□□□ -0.5
CHMP4A-203ENST00000527154 MGAT4AQ9UM21 535 aa11.91□□□□□ -0.5
CHMP4A-203ENST00000527154 ZNF257Q9Y2Q1 563 aa11.91□□□□□ -0.5
CHMP4A-203ENST00000527154 RPL36Q9Y3U8 105 aaKnown RBP11.91□□□□□ -0.5
CHMP4A-203ENST00000527154 SHOXO15266 292 aa11.9□□□□□ -0.5
CHMP4A-203ENST00000527154 S1PR2O95136 353 aa11.9□□□□□ -0.5
CHMP4A-203ENST00000527154 APOBP04114 4563 aaKnown RBP11.9□□□□□ -0.5
CHMP4A-203ENST00000527154 SCTP09683 121 aa11.9□□□□□ -0.5
CHMP4A-203ENST00000527154 PSMB6P28072 239 aa11.9□□□□□ -0.5
CHMP4A-203ENST00000527154 ARL3P36405 182 aa11.9□□□□□ -0.5
CHMP4A-203ENST00000527154 ELLP55199 621 aaPredicted RBP11.9□□□□□ -0.5
CHMP4A-203ENST00000527154 OR2G6Q5TZ20 316 aa11.9□□□□□ -0.5
CHMP4A-203ENST00000527154 UNQ9165/PRO28630Q6UXU0 137 aa11.9□□□□□ -0.5
CHMP4A-203ENST00000527154 GALNT14Q96FL9 552 aa11.9□□□□□ -0.5
CHMP4A-203ENST00000527154 SDHAF2Q9NX18 166 aa11.9□□□□□ -0.5
CHMP4A-203ENST00000527154 PLA2G2EQ9NZK7 142 aa11.9□□□□□ -0.5
CHMP4A-203ENST00000527154 NPIPB5A8MRT5 1133 aa11.89□□□□□ -0.51
CHMP4A-203ENST00000527154 TEX22C9J3V5 150 aa11.89□□□□□ -0.51
CHMP4A-203ENST00000527154 UBBP0CG47 229 aa11.89□□□□□ -0.51
CHMP4A-203ENST00000527154 RRASP10301 218 aa11.89□□□□□ -0.51
CHMP4A-203ENST00000527154 ETV1P50549 477 aa11.89□□□□□ -0.51
CHMP4A-203ENST00000527154 MFAP2P55001 183 aa11.89□□□□□ -0.51
CHMP4A-203ENST00000527154 QRFPP83859 136 aa11.89□□□□□ -0.51
CHMP4A-203ENST00000527154 VMA21Q3ZAQ7 101 aa11.89□□□□□ -0.51
CHMP4A-203ENST00000527154 RBPMS2Q6ZRY4 209 aaKnown RBP11.89□□□□□ -0.51
CHMP4A-203ENST00000527154 SLC25A42Q86VD7 318 aa11.89□□□□□ -0.51
CHMP4A-203ENST00000527154 SLC38A6Q8IZM9 456 aa11.89□□□□□ -0.51
CHMP4A-203ENST00000527154 DERL3Q96Q80 235 aa11.89□□□□□ -0.51
CHMP4A-203ENST00000527154 NICN1Q9BSH3 213 aa11.89□□□□□ -0.51
CHMP4A-203ENST00000527154 HRH4Q9H3N8 390 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms