RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 UNQ5815/PRO19632Q6UWF5 114 aa14.34□□□□□ -0.11
TSPAN4-216ENST00000526055 BVESQ8NE79 360 aa14.34□□□□□ -0.11
TSPAN4-216ENST00000526055 OR11H1Q8NG94 326 aa14.34□□□□□ -0.11
TSPAN4-216ENST00000526055 OSR1Q8TAX0 266 aaPredicted RBP14.34□□□□□ -0.11
TSPAN4-216ENST00000526055 FUNDC2Q9BWH2 189 aa14.34□□□□□ -0.11
TSPAN4-216ENST00000526055 SLA2Q9H6Q3 261 aa14.34□□□□□ -0.11
TSPAN4-216ENST00000526055 H3BUA1 57 aa14.33□□□□□ -0.12
TSPAN4-216ENST00000526055 SOX15O60248 233 aa14.33□□□□□ -0.12
TSPAN4-216ENST00000526055 TUSC2O75896 110 aa14.33□□□□□ -0.12
TSPAN4-216ENST00000526055 RAB25P57735 213 aa14.33□□□□□ -0.12
TSPAN4-216ENST00000526055 ZNF616Q08AN1 781 aa14.33□□□□□ -0.12
TSPAN4-216ENST00000526055 VMA21Q3ZAQ7 101 aa14.33□□□□□ -0.12
TSPAN4-216ENST00000526055 C9orf66Q5T8R8 295 aa14.33□□□□□ -0.12
TSPAN4-216ENST00000526055 GPR141Q7Z602 305 aa14.33□□□□□ -0.12
TSPAN4-216ENST00000526055 HOGA1Q86XE5 327 aa14.33□□□□□ -0.12
TSPAN4-216ENST00000526055 TEX45Q8NA69 505 aa14.33□□□□□ -0.12
TSPAN4-216ENST00000526055 LFNGQ8NES3 379 aa14.33□□□□□ -0.12
TSPAN4-216ENST00000526055 BEST4Q8NFU0 473 aa14.33□□□□□ -0.12
TSPAN4-216ENST00000526055 OR1N2Q8NGR9 330 aa14.33□□□□□ -0.12
TSPAN4-216ENST00000526055 KCTD12Q96CX2 325 aaKnown RBP14.33□□□□□ -0.12
TSPAN4-216ENST00000526055 AUNIPQ9H7T9 357 aa14.33□□□□□ -0.12
TSPAN4-216ENST00000526055 GNB4Q9HAV0 340 aa14.33□□□□□ -0.12
TSPAN4-216ENST00000526055 PRELID3BQ9Y3B1 194 aa14.33□□□□□ -0.12
TSPAN4-216ENST00000526055 A3GALT2U3KPV4 340 aa14.33□□□□□ -0.12
TSPAN4-216ENST00000526055 XRCC3O43542 346 aa14.32□□□□□ -0.12
TSPAN4-216ENST00000526055 RAMP3O60896 148 aa14.32□□□□□ -0.12
TSPAN4-216ENST00000526055 CNIH1O95406 144 aa14.32□□□□□ -0.12
TSPAN4-216ENST00000526055 NFYAP23511 347 aaPredicted RBP14.32□□□□□ -0.12
TSPAN4-216ENST00000526055 RPS19P39019 145 aaKnown RBP14.32□□□□□ -0.12
TSPAN4-216ENST00000526055 ALDH3B2P48448 385 aa14.32□□□□□ -0.12
TSPAN4-216ENST00000526055 ARPC4P59998 168 aa14.32□□□□□ -0.12
TSPAN4-216ENST00000526055 KRTAP10-11P60412 298 aa14.32□□□□□ -0.12
TSPAN4-216ENST00000526055 UBE2KP61086 200 aa14.32□□□□□ -0.12
TSPAN4-216ENST00000526055 DCTN2Q13561 401 aaKnown RBP14.32□□□□□ -0.12
TSPAN4-216ENST00000526055 MSMO1Q15800 293 aa14.32□□□□□ -0.12
TSPAN4-216ENST00000526055 S100A16Q96FQ6 103 aaKnown RBP14.32□□□□□ -0.12
TSPAN4-216ENST00000526055 HSD17B10Q99714 261 aaKnown RBP14.32□□□□□ -0.12
TSPAN4-216ENST00000526055 FAM103A1Q9BTL3 118 aaKnown RBP14.32□□□□□ -0.12
TSPAN4-216ENST00000526055 TPSG1Q9NRR2 321 aa14.32□□□□□ -0.12
TSPAN4-216ENST00000526055 RBMX2Q9Y388 322 aaKnown RBP14.32□□□□□ -0.12
TSPAN4-216ENST00000526055 LINC00473A8K010 186 aa14.31□□□□□ -0.12
TSPAN4-216ENST00000526055 ARPC1BO15143 372 aaKnown RBP14.31□□□□□ -0.12
TSPAN4-216ENST00000526055 CREBL2O60519 120 aaPredicted RBP14.31□□□□□ -0.12
TSPAN4-216ENST00000526055 BRI3O95415 125 aa14.31□□□□□ -0.12
TSPAN4-216ENST00000526055 LGALS1P09382 135 aaKnown RBP14.31□□□□□ -0.12
TSPAN4-216ENST00000526055 HOXD3P31249 432 aaPredicted RBP14.31□□□□□ -0.12
TSPAN4-216ENST00000526055 UBE2NLQ5JXB2 153 aa14.31□□□□□ -0.12
TSPAN4-216ENST00000526055 OVCH2Q7RTZ1 564 aa14.31□□□□□ -0.12
TSPAN4-216ENST00000526055 SCOCQ9UIL1 159 aa14.31□□□□□ -0.12
TSPAN4-216ENST00000526055 MRPS7Q9Y2R9 242 aaKnown RBP14.31□□□□□ -0.12
TSPAN4-216ENST00000526055 SRRM4A7MD48 611 aaKnown RBP14.3□□□□□ -0.12
TSPAN4-216ENST00000526055 K7EIL1 84 aa14.3□□□□□ -0.12
TSPAN4-216ENST00000526055 CRYZL1O95825 349 aa14.3□□□□□ -0.12
TSPAN4-216ENST00000526055 RPL5P46777 297 aaKnown RBP14.3□□□□□ -0.12
TSPAN4-216ENST00000526055 INSL3P51460 131 aa14.3□□□□□ -0.12
TSPAN4-216ENST00000526055 GNB1P62873 340 aa14.3□□□□□ -0.12
TSPAN4-216ENST00000526055 DGCR2P98153 550 aa14.3□□□□□ -0.12
TSPAN4-216ENST00000526055 KCTD9Q7L273 389 aa14.3□□□□□ -0.12
TSPAN4-216ENST00000526055 ANKRD13BQ86YJ7 626 aa14.3□□□□□ -0.12
TSPAN4-216ENST00000526055 GRPEL2Q8TAA5 225 aa14.3□□□□□ -0.12
TSPAN4-216ENST00000526055 IGKV1D-13A0A0B4J2D9 117 aa14.29□□□□□ -0.12
TSPAN4-216ENST00000526055 IGLV2-14P01704 120 aa14.29□□□□□ -0.12
TSPAN4-216ENST00000526055 IGKV1-13P0DP09 117 aa14.29□□□□□ -0.12
TSPAN4-216ENST00000526055 TGFBR1P36897 503 aa14.29□□□□□ -0.12
TSPAN4-216ENST00000526055 LSM3P62310 102 aaKnown RBP14.29□□□□□ -0.12
TSPAN4-216ENST00000526055 SSBP2P81877 361 aaPredicted RBP14.29□□□□□ -0.12
TSPAN4-216ENST00000526055 ZNF66Q6ZN08 573 aa14.29□□□□□ -0.12
TSPAN4-216ENST00000526055 POC5Q8NA72 575 aa14.29□□□□□ -0.12
TSPAN4-216ENST00000526055 ZBTB34Q8NCN2 500 aa14.29□□□□□ -0.12
TSPAN4-216ENST00000526055 SLC25A46Q96AG3 418 aa14.29□□□□□ -0.12
TSPAN4-216ENST00000526055 RHOVQ96L33 236 aa14.29□□□□□ -0.12
TSPAN4-216ENST00000526055 A0A0G2JLM5 398 aa14.28□□□□□ -0.12
TSPAN4-216ENST00000526055 SEC14L6B5MCN3 397 aa14.28□□□□□ -0.12
TSPAN4-216ENST00000526055 LINC01619G3V211 115 aa14.28□□□□□ -0.12
TSPAN4-216ENST00000526055 J3QRK9 145 aa14.28□□□□□ -0.12
TSPAN4-216ENST00000526055 GABARAPO95166 117 aa14.28□□□□□ -0.12
TSPAN4-216ENST00000526055 TPPP2P59282 170 aa14.28□□□□□ -0.12
TSPAN4-216ENST00000526055 PJVKQ0ZLH3 352 aa14.28□□□□□ -0.12
TSPAN4-216ENST00000526055 EIF4EBP1Q13541 118 aaPredicted RBP14.28□□□□□ -0.12
TSPAN4-216ENST00000526055 CDK10Q15131 360 aa14.28□□□□□ -0.12
TSPAN4-216ENST00000526055 PRSS8Q16651 343 aa14.28□□□□□ -0.12
TSPAN4-216ENST00000526055 ASPHD1Q5U4P2 390 aa14.28□□□□□ -0.12
TSPAN4-216ENST00000526055 GVQW1Q8N7I0 195 aa14.28□□□□□ -0.12
TSPAN4-216ENST00000526055 OR4S2Q8NH73 311 aa14.28□□□□□ -0.12
TSPAN4-216ENST00000526055 CMTM3Q96MX0 182 aa14.28□□□□□ -0.12
TSPAN4-216ENST00000526055 OR5B12Q96R08 314 aa14.28□□□□□ -0.12
TSPAN4-216ENST00000526055 WI2-2373I1.2A0A1W2PRP0 233 aa14.27□□□□□ -0.13
TSPAN4-216ENST00000526055 FCGR3BO75015 233 aa14.27□□□□□ -0.13
TSPAN4-216ENST00000526055 TRGV3P03979 118 aa14.27□□□□□ -0.13
TSPAN4-216ENST00000526055 HSPB1P04792 205 aaKnown RBP14.27□□□□□ -0.13
TSPAN4-216ENST00000526055 AADACP22760 399 aa14.27□□□□□ -0.13
TSPAN4-216ENST00000526055 FCGR2CP31995 323 aa14.27□□□□□ -0.13
TSPAN4-216ENST00000526055 KIR2DS2P43631 304 aa14.27□□□□□ -0.13
TSPAN4-216ENST00000526055 MRGPRG-AS1Q2M3A8 158 aa14.27□□□□□ -0.13
TSPAN4-216ENST00000526055 TMEM69Q5SWH9 247 aa14.27□□□□□ -0.13
TSPAN4-216ENST00000526055 GPR107Q5VW38 600 aa14.27□□□□□ -0.13
TSPAN4-216ENST00000526055 SAMD12Q8N8I0 201 aa14.27□□□□□ -0.13
TSPAN4-216ENST00000526055 OR5AP2Q8NGF4 316 aa14.27□□□□□ -0.13
TSPAN4-216ENST00000526055 VSTM2AQ8TAG5 236 aa14.27□□□□□ -0.13
TSPAN4-216ENST00000526055 GIMAP1Q8WWP7 306 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms