RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 GPX8Q8TED1 209 aa8.19□□□□□ -1.1
RBBP4-216ENST00000525506 GIMAP1Q8WWP7 306 aa8.19□□□□□ -1.1
RBBP4-216ENST00000525506 C5orf30Q96GV9 206 aa8.19□□□□□ -1.1
RBBP4-216ENST00000525506 CCDC59Q9P031 241 aaKnown RBP8.19□□□□□ -1.1
RBBP4-216ENST00000525506 MRPS7Q9Y2R9 242 aaKnown RBP8.19□□□□□ -1.1
RBBP4-216ENST00000525506 RBMX2Q9Y388 322 aaKnown RBP8.19□□□□□ -1.1
RBBP4-216ENST00000525506 PRELID3BQ9Y3B1 194 aa8.19□□□□□ -1.1
RBBP4-216ENST00000525506 WI2-2373I1.2A0A1W2PRP0 233 aa8.18□□□□□ -1.1
RBBP4-216ENST00000525506 K7EIL1 84 aa8.18□□□□□ -1.1
RBBP4-216ENST00000525506 ATP6V0E1O15342 81 aa8.18□□□□□ -1.1
RBBP4-216ENST00000525506 CREBL2O60519 120 aaPredicted RBP8.18□□□□□ -1.1
RBBP4-216ENST00000525506 NOL3O60936 208 aaKnown RBP8.18□□□□□ -1.1
RBBP4-216ENST00000525506 IGLV1-40P01703 118 aa8.18□□□□□ -1.1
RBBP4-216ENST00000525506 ELK1P19419 428 aa8.18□□□□□ -1.1
RBBP4-216ENST00000525506 FCGR2CP31995 323 aa8.18□□□□□ -1.1
RBBP4-216ENST00000525506 RPS16P62249 146 aaKnown RBP8.18□□□□□ -1.1
RBBP4-216ENST00000525506 CX3CL1P78423 397 aa8.18□□□□□ -1.1
RBBP4-216ENST00000525506 DYRK1AQ13627 763 aa8.18□□□□□ -1.1
RBBP4-216ENST00000525506 PLGLAQ15195 96 aa8.18□□□□□ -1.1
RBBP4-216ENST00000525506 DEFB136Q30KP8 78 aa8.18□□□□□ -1.1
RBBP4-216ENST00000525506 PYHIN1Q6K0P9 492 aa8.18□□□□□ -1.1
RBBP4-216ENST00000525506 DHRS11Q6UWP2 260 aa8.18□□□□□ -1.1
RBBP4-216ENST00000525506 KCTD9Q7L273 389 aa8.18□□□□□ -1.1
RBBP4-216ENST00000525506 PPP1R27Q86WC6 154 aa8.18□□□□□ -1.1
RBBP4-216ENST00000525506 MINDY2Q8NBR6 621 aa8.18□□□□□ -1.1
RBBP4-216ENST00000525506 RCC1LQ96I51 464 aaKnown RBP8.18□□□□□ -1.1
RBBP4-216ENST00000525506 HARBI1Q96MB7 349 aa8.18□□□□□ -1.1
RBBP4-216ENST00000525506 FBXL15Q9H469 300 aa8.18□□□□□ -1.1
RBBP4-216ENST00000525506 RABL2AQ9UBK7 228 aaPredicted RBP8.18□□□□□ -1.1
RBBP4-216ENST00000525506 METTL1Q9UBP6 276 aaKnown RBP8.18□□□□□ -1.1
RBBP4-216ENST00000525506 SCOCQ9UIL1 159 aa8.18□□□□□ -1.1
RBBP4-216ENST00000525506 RABL2BQ9UNT1 228 aa8.18□□□□□ -1.1
RBBP4-216ENST00000525506 TRAV41A0A0B4J266 112 aa8.17□□□□□ -1.1
RBBP4-216ENST00000525506 IGKV1D-13A0A0B4J2D9 117 aa8.17□□□□□ -1.1
RBBP4-216ENST00000525506 LINC00473A8K010 186 aa8.17□□□□□ -1.1
RBBP4-216ENST00000525506 SHOXO15266 292 aa8.17□□□□□ -1.1
RBBP4-216ENST00000525506 RBFOX2O43251 390 aaKnown RBP eCLIP8.17□□□□□ -1.1
RBBP4-216ENST00000525506 HPGDSO60760 199 aa8.17□□□□□ -1.1
RBBP4-216ENST00000525506 IGLV2-23P01705 113 aa8.17□□□□□ -1.1
RBBP4-216ENST00000525506 CRYGBP07316 175 aa8.17□□□□□ -1.1
RBBP4-216ENST00000525506 IGKV1-13P0DP09 117 aa8.17□□□□□ -1.1
RBBP4-216ENST00000525506 TBPP20226 339 aa8.17□□□□□ -1.1
RBBP4-216ENST00000525506 RCVRNP35243 200 aa8.17□□□□□ -1.1
RBBP4-216ENST00000525506 KIR2DS2P43631 304 aa8.17□□□□□ -1.1
RBBP4-216ENST00000525506 CDX1P47902 265 aaPredicted RBP8.17□□□□□ -1.1
RBBP4-216ENST00000525506 RAB25P57735 213 aa8.17□□□□□ -1.1
RBBP4-216ENST00000525506 LINC00205P59089 165 aa8.17□□□□□ -1.1
RBBP4-216ENST00000525506 UBE2KP61086 200 aa8.17□□□□□ -1.1
RBBP4-216ENST00000525506 MRPS10P82664 201 aaKnown RBP8.17□□□□□ -1.1
RBBP4-216ENST00000525506 NDPQ00604 133 aa8.17□□□□□ -1.1
RBBP4-216ENST00000525506 TMEM267Q0VDI3 215 aaPredicted RBP8.17□□□□□ -1.1
RBBP4-216ENST00000525506 VMA21Q3ZAQ7 101 aa8.17□□□□□ -1.1
RBBP4-216ENST00000525506 AKIRIN2Q53H80 203 aa8.17□□□□□ -1.1
RBBP4-216ENST00000525506 ACTBL2Q562R1 376 aa8.17□□□□□ -1.1
RBBP4-216ENST00000525506 CLVS1Q8IUQ0 354 aaPredicted RBP8.17□□□□□ -1.1
RBBP4-216ENST00000525506 ZNF695Q8IW36 515 aa8.17□□□□□ -1.1
RBBP4-216ENST00000525506 TEX45Q8NA69 505 aa8.17□□□□□ -1.1
RBBP4-216ENST00000525506 OR5M8Q8NGP6 311 aa8.17□□□□□ -1.1
RBBP4-216ENST00000525506 OR4S2Q8NH73 311 aa8.17□□□□□ -1.1
RBBP4-216ENST00000525506 RAX2Q96IS3 184 aa8.17□□□□□ -1.1
RBBP4-216ENST00000525506 TMEM68Q96MH6 324 aa8.17□□□□□ -1.1
RBBP4-216ENST00000525506 PARP11Q9NR21 331 aa8.17□□□□□ -1.1
RBBP4-216ENST00000525506 G3V318 75 aa8.16□□□□□ -1.1
RBBP4-216ENST00000525506 SLC25A17O43808 307 aa8.16□□□□□ -1.1
RBBP4-216ENST00000525506 BRI3O95415 125 aa8.16□□□□□ -1.1
RBBP4-216ENST00000525506 DUS4LO95620 317 aaKnown RBP8.16□□□□□ -1.1
RBBP4-216ENST00000525506 CRYZL1O95825 349 aa8.16□□□□□ -1.1
RBBP4-216ENST00000525506 CA2P00918 260 aa8.16□□□□□ -1.1
RBBP4-216ENST00000525506 FGF2P09038 288 aa8.16□□□□□ -1.1
RBBP4-216ENST00000525506 PTHLHP12272 177 aa8.16□□□□□ -1.1
RBBP4-216ENST00000525506 AADACP22760 399 aa8.16□□□□□ -1.1
RBBP4-216ENST00000525506 MYCNOSP40205 109 aa8.16□□□□□ -1.1
RBBP4-216ENST00000525506 COL7A1Q02388 2944 aa8.16□□□□□ -1.1
RBBP4-216ENST00000525506 SPCS2Q15005 226 aa8.16□□□□□ -1.1
RBBP4-216ENST00000525506 BVESQ8NE79 360 aa8.16□□□□□ -1.1
RBBP4-216ENST00000525506 OR5H2Q8NGV7 314 aa8.16□□□□□ -1.1
RBBP4-216ENST00000525506 VSTM2AQ8TAG5 236 aa8.16□□□□□ -1.1
RBBP4-216ENST00000525506 DYNC2LI1Q8TCX1 351 aa8.16□□□□□ -1.1
RBBP4-216ENST00000525506 CD300LFQ8TDQ1 290 aa8.16□□□□□ -1.1
RBBP4-216ENST00000525506 C4orf3Q8WVX3 66 aa8.16□□□□□ -1.1
RBBP4-216ENST00000525506 ARPC1AQ92747 370 aa8.16□□□□□ -1.1
RBBP4-216ENST00000525506 MOB3AQ96BX8 217 aa8.16□□□□□ -1.1
RBBP4-216ENST00000525506 ISOC1Q96CN7 298 aa8.16□□□□□ -1.1
RBBP4-216ENST00000525506 UBE2E2Q96LR5 201 aa8.16□□□□□ -1.1
RBBP4-216ENST00000525506 P2RX4Q99571 388 aa8.16□□□□□ -1.1
RBBP4-216ENST00000525506 AIFM2Q9BRQ8 373 aa8.16□□□□□ -1.1
RBBP4-216ENST00000525506 EHFQ9NZC4 300 aa8.16□□□□□ -1.1
RBBP4-216ENST00000525506 FOXA2Q9Y261 457 aaPredicted RBP8.16□□□□□ -1.1
RBBP4-216ENST00000525506 NUBP2Q9Y5Y2 271 aa8.16□□□□□ -1.1
RBBP4-216ENST00000525506 WSB1Q9Y6I7 421 aa8.16□□□□□ -1.1
RBBP4-216ENST00000525506 FAM25AB3EWG3 89 aa8.15□□□□□ -1.1
RBBP4-216ENST00000525506 FAM25CB3EWG5 89 aa8.15□□□□□ -1.1
RBBP4-216ENST00000525506 FAM25GB3EWG6 89 aa8.15□□□□□ -1.1
RBBP4-216ENST00000525506 H3BMQ9 156 aa8.15□□□□□ -1.1
RBBP4-216ENST00000525506 H3BUA1 57 aa8.15□□□□□ -1.1
RBBP4-216ENST00000525506 ZNF701M0R085 212 aaPredicted RBP8.15□□□□□ -1.1
RBBP4-216ENST00000525506 CCL24O00175 119 aa8.15□□□□□ -1.1
RBBP4-216ENST00000525506 EGR2P11161 476 aaPredicted RBP8.15□□□□□ -1.1
RBBP4-216ENST00000525506 HERV-K104P61576 105 aa8.15□□□□□ -1.1
RBBP4-216ENST00000525506 RUNX1Q01196 453 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms