RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 BTN1A1Q13410 526 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 KCNJ8Q15842 424 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 PRR4Q16378 134 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 CCL15Q16663 113 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 LTC4SQ16873 150 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 C12orf74Q32Q52 190 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 CLLU1OSQ5K130 101 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 IBA57Q5T440 356 aaKnown RBP3.4□□□□□ -1.87
CD44-213ENST00000525209 CRIP3Q6Q6R5 217 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 SBSNQ6UWP8 590 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 ZNF493Q6ZR52 646 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 RFLNAQ6ZTI6 216 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 TMEM252Q8N6L7 170 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 ZNF283Q8N7M2 679 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 DCAF4L2Q8NA75 395 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 LY6G5BQ8NDX9 201 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 OR1L1Q8NH94 360 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 STARD4Q96DR4 205 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 TSPAN32Q96QS1 320 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 ZNF382Q96SR6 550 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 ZNF184Q99676 751 aaPredicted RBP3.4□□□□□ -1.87
CD44-213ENST00000525209 MRPL20Q9BYC9 149 aaKnown RBP3.4□□□□□ -1.87
CD44-213ENST00000525209 EIF5A2Q9GZV4 153 aaKnown RBP3.4□□□□□ -1.87
CD44-213ENST00000525209 SLCO1B3Q9NPD5 702 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 CCL28Q9NRJ3 127 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 MARCH5Q9NX47 278 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 KLF13Q9Y2Y9 288 aaPredicted RBP3.4□□□□□ -1.87
CD44-213ENST00000525209 U3KQ87 197 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 LAMB2P55268 1798 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 THSD7BQ9C0I4 1608 aa3.4□□□□□ -1.87
CD44-213ENST00000525209 COL4A5P29400 1685 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 CEP290O15078 2479 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 ROBO3Q96MS0 1386 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 UBR2Q8IWV8 1755 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 MEIKINA0A087WXM9 373 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 NKX2-6A6NCS4 301 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 AIPO00170 330 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 ISLRO14498 428 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 GYG2O15488 501 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 TCF21O43680 179 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 TBL1XO60907 577 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 HLA-DRB1P01911 266 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 OR12D1P0DN82 309 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 RPL7P18124 248 aaKnown RBP3.39□□□□□ -1.87
CD44-213ENST00000525209 RPS3P23396 243 aaKnown RBP eCLIP3.39□□□□□ -1.87
CD44-213ENST00000525209 SRIP30626 198 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 HSPA9P38646 679 aaKnown RBP3.39□□□□□ -1.87
CD44-213ENST00000525209 VEGFCP49767 419 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 LHX2P50458 406 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 UBE2NP61088 152 aaKnown RBP3.39□□□□□ -1.87
CD44-213ENST00000525209 MEF2CQ06413 473 aaPredicted RBP3.39□□□□□ -1.87
CD44-213ENST00000525209 RUNX3Q13761 415 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 MORN2Q502X0 79 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 TNFAIP8L3Q5GJ75 292 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 C9orf66Q5T8R8 295 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 GLYATQ6IB77 296 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 ZNF613Q6PF04 617 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 HAGHLQ6PII5 290 aaPredicted RBP3.39□□□□□ -1.87
CD44-213ENST00000525209 PLET1Q6UQ28 207 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 H2AFVQ71UI9 128 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 ATP5L2Q7Z4Y8 100 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 ANKRD29Q8N6D5 301 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 SLC30A7Q8NEW0 376 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 OR5A1Q8NGJ0 315 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 OR51H1Q8NH63 302 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 VN1R17PQ8TDU5 208 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 DCAKDQ8WVC6 231 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 ACOT12Q8WYK0 555 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 RPUSD4Q96CM3 377 aaKnown RBP3.39□□□□□ -1.87
CD44-213ENST00000525209 MALSU1Q96EH3 234 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 TMEM243Q9BU79 118 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 SAMD10Q9BYL1 202 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 C20orf27Q9GZN8 174 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 PBOV1Q9GZY1 135 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 PARP11Q9NR21 331 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 GNG8Q9UK08 70 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 POMPQ9Y244 141 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 PCYT1BQ9Y5K3 369 aaPredicted RBP3.39□□□□□ -1.87
CD44-213ENST00000525209 F11RQ9Y624 299 aaKnown RBP3.39□□□□□ -1.87
CD44-213ENST00000525209 PXMP4Q9Y6I8 212 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 ENPP4Q9Y6X5 453 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 NAV1Q8NEY1 1877 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 DYSFO75923 2080 aa3.39□□□□□ -1.87
CD44-213ENST00000525209 DDX60Q8IY21 1712 aaKnown RBP3.39□□□□□ -1.87
CD44-213ENST00000525209 MED23Q9ULK4 1368 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 TCF20Q9UGU0 1960 aaKnown RBP3.38□□□□□ -1.87
CD44-213ENST00000525209 MYO9BQ13459 2157 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 TTC3P53804 2025 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 FAM92AA1XBS5 289 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 EPOPA6NHQ4 379 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 F5H5P2 479 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 TMEM250H0YL14 139 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 SLC22A1O15245 554 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 ANGPTL7O43827 346 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 PIAS1O75925 651 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 CDS2O95674 445 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 ZNF682O95780 498 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 FAM107AO95990 144 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 C8GP07360 202 aa3.38□□□□□ -1.87
CD44-213ENST00000525209 CCL5P13501 91 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms