RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 A0A0A6YYJ9 748 aa12.75□□□□□ -0.37
TSPAN4-213ENST00000524895 C7orf66A4D0T2 115 aa12.75□□□□□ -0.37
TSPAN4-213ENST00000524895 SNRPGP15A8MWD9 76 aa12.75□□□□□ -0.37
TSPAN4-213ENST00000524895 CRYZL1O95825 349 aa12.75□□□□□ -0.37
TSPAN4-213ENST00000524895 CD1BP29016 333 aa12.75□□□□□ -0.37
TSPAN4-213ENST00000524895 LPAR6P43657 344 aa12.75□□□□□ -0.37
TSPAN4-213ENST00000524895 BRWD1-AS2P59051 145 aa12.75□□□□□ -0.37
TSPAN4-213ENST00000524895 HABP2Q14520 560 aaPredicted RBP12.75□□□□□ -0.37
TSPAN4-213ENST00000524895 Q6ZNX1 250 aa12.75□□□□□ -0.37
TSPAN4-213ENST00000524895 LIAT1Q6ZQX7 453 aa12.75□□□□□ -0.37
TSPAN4-213ENST00000524895 BCL6BQ8N143 479 aaPredicted RBP12.75□□□□□ -0.37
TSPAN4-213ENST00000524895 GLYATL2Q8WU03 294 aa12.75□□□□□ -0.37
TSPAN4-213ENST00000524895 MITD1Q8WV92 249 aa12.75□□□□□ -0.37
TSPAN4-213ENST00000524895 PHB2Q99623 299 aa12.75□□□□□ -0.37
TSPAN4-213ENST00000524895 MEGF9Q9H1U4 602 aa12.75□□□□□ -0.37
TSPAN4-213ENST00000524895 CSPG4Q6UVK1 2322 aa12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 MDFIC2A0A1B0GVS7 189 aa12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 SSNA1O43805 119 aa12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 S1PR2O95136 353 aa12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 VENTXO95231 258 aa12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 HPRT1P00492 218 aa12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 IGKV1D-33P01593 117 aa12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 IGKV1-33P01594 117 aa12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 IGKV1-16P04430 117 aa12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 RPA2P15927 270 aa12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 SCGB2A2Q13296 93 aa12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 HES1Q14469 280 aa12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 LRRC75BQ2VPJ9 315 aa12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 DEFB112Q30KQ8 113 aa12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 ANKRD55Q3KP44 614 aa12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 ZNF585BQ52M93 769 aa12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 TMEM268Q5VZI3 342 aa12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 Q71RC1 249 aaPredicted RBP12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 ZNF695Q8IW36 515 aa12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 LGI3Q8N145 548 aa12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 C12orf45Q8N5I9 185 aaPredicted RBP12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 UXS1Q8NBZ7 420 aa12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 FLYWCH2Q96CP2 140 aaKnown RBP12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 OR51J1Q9H342 316 aa12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 GSX1Q9H4S2 264 aaPredicted RBP12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 CDC42EP3Q9UKI2 254 aa12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 SVEP1Q4LDE5 3571 aa12.74□□□□□ -0.37
TSPAN4-213ENST00000524895 TLN2Q9Y4G6 2542 aa12.73□□□□□ -0.37
TSPAN4-213ENST00000524895 HIVEP1P15822 2718 aa12.73□□□□□ -0.37
TSPAN4-213ENST00000524895 PIGBOS1A0A0B4J2F0 54 aa12.73□□□□□ -0.37
TSPAN4-213ENST00000524895 VGLL3A8MV65 326 aa12.73□□□□□ -0.37
TSPAN4-213ENST00000524895 CDS2O95674 445 aa12.73□□□□□ -0.37
TSPAN4-213ENST00000524895 SNRNP70P08621 437 aaKnown RBP12.73□□□□□ -0.37
TSPAN4-213ENST00000524895 FAM106CPP0CH98 169 aa12.73□□□□□ -0.37
TSPAN4-213ENST00000524895 CD24P25063 80 aa12.73□□□□□ -0.37
TSPAN4-213ENST00000524895 DYNLT3P51808 116 aa12.73□□□□□ -0.37
TSPAN4-213ENST00000524895 TMEM177Q53S58 311 aa12.73□□□□□ -0.37
TSPAN4-213ENST00000524895 LIN54Q6MZP7 749 aa12.73□□□□□ -0.37
TSPAN4-213ENST00000524895 OR4C13Q8NGP0 309 aa12.73□□□□□ -0.37
TSPAN4-213ENST00000524895 LHFPL5Q8TAF8 219 aa12.73□□□□□ -0.37
TSPAN4-213ENST00000524895 OSR1Q8TAX0 266 aaPredicted RBP12.73□□□□□ -0.37
TSPAN4-213ENST00000524895 RBPMSQ93062 196 aaKnown RBP12.73□□□□□ -0.37
TSPAN4-213ENST00000524895 IL22RA2Q969J5 263 aa12.73□□□□□ -0.37
TSPAN4-213ENST00000524895 ZDHHC16Q969W1 377 aa12.73□□□□□ -0.37
TSPAN4-213ENST00000524895 RBMXL1Q96E39 390 aaKnown RBP12.73□□□□□ -0.37
TSPAN4-213ENST00000524895 HARBI1Q96MB7 349 aa12.73□□□□□ -0.37
TSPAN4-213ENST00000524895 TMEM56Q96MV1 263 aa12.73□□□□□ -0.37
TSPAN4-213ENST00000524895 PLEKHA2Q9HB19 425 aa12.73□□□□□ -0.37
TSPAN4-213ENST00000524895 COMMD9Q9P000 198 aa12.73□□□□□ -0.37
TSPAN4-213ENST00000524895 TMEM56-RWDD3S4R434 201 aa12.73□□□□□ -0.37
TSPAN4-213ENST00000524895 A0A0B4J2A0 478 aa12.72□□□□□ -0.37
TSPAN4-213ENST00000524895 SHOXO15266 292 aa12.72□□□□□ -0.37
TSPAN4-213ENST00000524895 ATG12O94817 140 aa12.72□□□□□ -0.37
TSPAN4-213ENST00000524895 MOSP00540 346 aa12.72□□□□□ -0.37
TSPAN4-213ENST00000524895 AKR1C2P52895 323 aa12.72□□□□□ -0.37
TSPAN4-213ENST00000524895 ERVK-16P61578 105 aa12.72□□□□□ -0.37
TSPAN4-213ENST00000524895 RPS16P62249 146 aaKnown RBP12.72□□□□□ -0.37
TSPAN4-213ENST00000524895 AANATQ16613 207 aa12.72□□□□□ -0.37
TSPAN4-213ENST00000524895 SELENOHQ8IZQ5 122 aaKnown RBP12.72□□□□□ -0.37
TSPAN4-213ENST00000524895 LRTM2Q8N967 370 aa12.72□□□□□ -0.37
TSPAN4-213ENST00000524895 OR2T10Q8NGZ9 312 aa12.72□□□□□ -0.37
TSPAN4-213ENST00000524895 RNASE11Q8TAA1 199 aaKnown RBP12.72□□□□□ -0.37
TSPAN4-213ENST00000524895 R3HDM4Q96D70 268 aa12.72□□□□□ -0.37
TSPAN4-213ENST00000524895 SSX3Q99909 188 aa12.72□□□□□ -0.37
TSPAN4-213ENST00000524895 SHPKQ9UHJ6 478 aa12.72□□□□□ -0.37
TSPAN4-213ENST00000524895 hCG_2014768A0A024R1R8 64 aa12.71□□□□□ -0.37
TSPAN4-213ENST00000524895 FAM90A9PA6NNJ1 464 aa12.71□□□□□ -0.37
TSPAN4-213ENST00000524895 H3BUX3 64 aa12.71□□□□□ -0.37
TSPAN4-213ENST00000524895 HRASP01112 189 aa12.71□□□□□ -0.37
TSPAN4-213ENST00000524895 KRASP01116 189 aa12.71□□□□□ -0.37
TSPAN4-213ENST00000524895 IGKV1-39P01597 117 aa12.71□□□□□ -0.37
TSPAN4-213ENST00000524895 IGKV1D-39P04432 117 aa12.71□□□□□ -0.37
TSPAN4-213ENST00000524895 NQO2P16083 231 aa12.71□□□□□ -0.37
TSPAN4-213ENST00000524895 TMEM11P17152 192 aa12.71□□□□□ -0.37
TSPAN4-213ENST00000524895 SRD5A1P18405 259 aa12.71□□□□□ -0.37
TSPAN4-213ENST00000524895 HNF4GQ14541 408 aa12.71□□□□□ -0.37
TSPAN4-213ENST00000524895 SLC35G3Q8N808 338 aa12.71□□□□□ -0.37
TSPAN4-213ENST00000524895 DMBX1Q8NFW5 382 aa12.71□□□□□ -0.37
TSPAN4-213ENST00000524895 EAF1Q96JC9 268 aaPredicted RBP12.71□□□□□ -0.37
TSPAN4-213ENST00000524895 AIFM2Q9BRQ8 373 aa12.71□□□□□ -0.37
TSPAN4-213ENST00000524895 DUXBA0A1W2PPF3 345 aa12.7□□□□□ -0.38
TSPAN4-213ENST00000524895 MARCH11A6NNE9 402 aa12.7□□□□□ -0.38
TSPAN4-213ENST00000524895 INAFM1C9JVW0 142 aa12.7□□□□□ -0.38
TSPAN4-213ENST00000524895 G6PCP35575 357 aa12.7□□□□□ -0.38
TSPAN4-213ENST00000524895 THNSL2Q86YJ6 484 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms