RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 CLEC7AQ9BXN2 247 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 DNTTIP1Q9H147 329 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 SLITRK2Q9H156 845 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 ABCG5Q9H222 651 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 AUNIPQ9H7T9 357 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 RHOFQ9HBH0 211 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 SIRT7Q9NRC8 400 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 RHBDL2Q9NX52 303 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 CCDC59Q9P031 241 aaKnown RBP2.33□□□□□ -2.04
CSDE1-208ENST00000524652 ZNRD1Q9P1U0 126 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 COMMD3Q9UBI1 195 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 GHRLQ9UBU3 117 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 CLN8Q9UBY8 286 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 RSL24D1Q9UHA3 163 aaKnown RBP2.33□□□□□ -2.04
CSDE1-208ENST00000524652 AK3Q9UIJ7 227 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 KIF25Q9UIL4 384 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 RPUSD1Q9UJJ7 312 aaKnown RBP2.33□□□□□ -2.04
CSDE1-208ENST00000524652 SPATA2Q9UM82 520 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 INSIG2Q9Y5U4 225 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 PEX16Q9Y5Y5 336 aa2.33□□□□□ -2.04
CSDE1-208ENST00000524652 PRKDCP78527 4128 aaKnown RBP2.32□□□□□ -2.04
CSDE1-208ENST00000524652 TENM3Q9P273 2699 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 LOC105371242A0A075B767 164 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 IGHV3OR16-10A0A075B7F0 116 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 IGHV3-43A0A0B4J1X8 118 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 TRAV40A0A0B4J280 105 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 PPIAL4CA0A0B4J2A2 164 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 IGKV1-6A0A0C4DH72 117 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 A0A0G2JMP0 313 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 CENPVL3A0A0U1RRI6 287 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 A0A0X1KG70 313 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 KIR2DS1A0A191URI9 304 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 MDFIC2A0A1B0GVS7 189 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 SMIM31A0A1B0GVY4 71 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 A0A1W2PPH5 198 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 ODAMA1E959 279 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 NKX6-3A6NJ46 265 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 C17orf98A8MV24 154 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 B4DSR2 109 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 C12orf77C9JDV5 145 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 ZNF701M0R085 212 aaPredicted RBP2.32□□□□□ -2.04
CSDE1-208ENST00000524652 SLC31A2O15432 143 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 NDUFB3O43676 98 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 NDUFA2O43678 99 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 LANCL1O43813 399 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 PDCD6O75340 191 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 IGHV3-7P01780 117 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 MT-ND4P03905 459 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 FCER2P06734 321 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 FCGR3AP08637 254 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 SCTP09683 121 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 CD3GP09693 182 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 PPIAL4GP0DN37 164 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 IGHV3-43DP0DP04 118 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 HIST1H1DP16402 221 aaKnown RBP2.32□□□□□ -2.04
CSDE1-208ENST00000524652 FUT3P21217 361 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 CPT2P23786 658 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 ERP29P30040 261 aaKnown RBP2.32□□□□□ -2.04
CSDE1-208ENST00000524652 RORCP51449 518 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 PSMD7P51665 324 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 EDDM3BP56851 147 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 TAS2R20P59543 309 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 RPL31P62899 125 aaKnown RBP2.32□□□□□ -2.04
CSDE1-208ENST00000524652 DIAPH2-AS1Q14236 149 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 GPR176Q14439 515 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 GNMTQ14749 295 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 HMGN3Q15651 99 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 ZNF79Q15937 498 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 CDNFQ49AH0 187 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 PAN3Q58A45 887 aaKnown RBP2.32□□□□□ -2.04
CSDE1-208ENST00000524652 LRRC10Q5BKY1 277 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 KRBOX4Q5JUW0 171 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 UBE2NLQ5JXB2 153 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 PRAMEF5Q5TYX0 476 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 CYB5R2Q6BCY4 276 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 VMO1Q7Z5L0 202 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 LHFPL4Q7Z7J7 247 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 CROCCP3Q8IVE0 287 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 PDZD9Q8IXQ8 264 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 DYNAPQ8N1N2 210 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 LINC00612Q8N6U2 182 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 SAMD12Q8N8I0 201 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 CHST4Q8NCG5 386 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 ZNF439Q8NDP4 499 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 OR4M2Q8NGB6 313 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 OR1L1Q8NH94 360 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 RFESDQ8TAC1 157 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 CORO2AQ92828 525 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 LEAP2Q969E1 77 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 TMEM186Q96B77 213 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 RAB39BQ96DA2 213 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 DGCR14Q96DF8 476 aaKnown RBP2.32□□□□□ -2.04
CSDE1-208ENST00000524652 MRPS24Q96EL2 167 aaKnown RBP2.32□□□□□ -2.04
CSDE1-208ENST00000524652 C5orf30Q96GV9 206 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 WDFY2Q96P53 400 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 ABHD1Q96SE0 405 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 SDHCQ99643 169 aaPredicted RBP2.32□□□□□ -2.04
CSDE1-208ENST00000524652 SOSTQ9BQB4 213 aa2.32□□□□□ -2.04
CSDE1-208ENST00000524652 NUDT16L1Q9BRJ7 211 aaKnown RBP2.32□□□□□ -2.04
CSDE1-208ENST00000524652 PARP12Q9H0J9 701 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms