RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 SPIN2AQ99865 258 aa12.72□□□□□ -0.37
PVT1-220ENST00000524165 SPIN2BQ9BPZ2 258 aa12.72□□□□□ -0.37
PVT1-220ENST00000524165 ZNF221Q9UK13 617 aa12.72□□□□□ -0.37
PVT1-220ENST00000524165 FKBP6O75344 327 aa12.71□□□□□ -0.37
PVT1-220ENST00000524165 MGMTP16455 207 aa12.71□□□□□ -0.37
PVT1-220ENST00000524165 MED21Q13503 144 aa12.71□□□□□ -0.37
PVT1-220ENST00000524165 RBMY1FQ15415 496 aaKnown RBP12.71□□□□□ -0.37
PVT1-220ENST00000524165 PRSS8Q16651 343 aa12.71□□□□□ -0.37
PVT1-220ENST00000524165 GLIPR1L1Q6UWM5 242 aa12.71□□□□□ -0.37
PVT1-220ENST00000524165 Q6ZTC4 211 aa12.71□□□□□ -0.37
PVT1-220ENST00000524165 SLC25A42Q86VD7 318 aa12.71□□□□□ -0.37
PVT1-220ENST00000524165 TEX45Q8NA69 505 aa12.71□□□□□ -0.37
PVT1-220ENST00000524165 OR13C5Q8NGS8 318 aa12.71□□□□□ -0.37
PVT1-220ENST00000524165 CCDC124Q96CT7 223 aaKnown RBP12.71□□□□□ -0.37
PVT1-220ENST00000524165 BANF2Q9H503 90 aa12.71□□□□□ -0.37
PVT1-220ENST00000524165 OR4C46A6NHA9 309 aa12.7□□□□□ -0.38
PVT1-220ENST00000524165 SRRM4A7MD48 611 aaKnown RBP12.7□□□□□ -0.38
PVT1-220ENST00000524165 MYOD1P15172 320 aa12.7□□□□□ -0.38
PVT1-220ENST00000524165 ZBTB25P24278 435 aa12.7□□□□□ -0.38
PVT1-220ENST00000524165 CEACAM6P40199 344 aa12.7□□□□□ -0.38
PVT1-220ENST00000524165 LAMTOR1Q6IAA8 161 aa12.7□□□□□ -0.38
PVT1-220ENST00000524165 UNQ9165/PRO28630Q6UXU0 137 aa12.7□□□□□ -0.38
PVT1-220ENST00000524165 SVOPQ8N4V2 548 aa12.7□□□□□ -0.38
PVT1-220ENST00000524165 Q8NAQ8 132 aa12.7□□□□□ -0.38
PVT1-220ENST00000524165 ZNF257Q9Y2Q1 563 aa12.7□□□□□ -0.38
PVT1-220ENST00000524165 UFC1Q9Y3C8 167 aa12.7□□□□□ -0.38
PVT1-220ENST00000524165 B2RBV5 119 aa12.69□□□□□ -0.38
PVT1-220ENST00000524165 M0R1X1 148 aa12.69□□□□□ -0.38
PVT1-220ENST00000524165 IGHV3-23P01764 117 aa12.69□□□□□ -0.38
PVT1-220ENST00000524165 CBX3Q13185 183 aa12.69□□□□□ -0.38
PVT1-220ENST00000524165 C1orf134Q5TEV5 83 aa12.69□□□□□ -0.38
PVT1-220ENST00000524165 ZNF880Q6PDB4 577 aa12.69□□□□□ -0.38
PVT1-220ENST00000524165 LHFPL3Q86UP9 236 aa12.69□□□□□ -0.38
PVT1-220ENST00000524165 CENPSQ8N2Z9 138 aa12.69□□□□□ -0.38
PVT1-220ENST00000524165 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.69□□□□□ -0.38
PVT1-220ENST00000524165 ACOT12Q8WYK0 555 aa12.69□□□□□ -0.38
PVT1-220ENST00000524165 MUL1Q969V5 352 aa12.69□□□□□ -0.38
PVT1-220ENST00000524165 EXOGQ9Y2C4 368 aaKnown RBP12.69□□□□□ -0.38
PVT1-220ENST00000524165 DNAH5Q8TE73 4624 aa12.69□□□□□ -0.38
PVT1-220ENST00000524165 CRTAPO75718 401 aaPredicted RBP12.68□□□□□ -0.38
PVT1-220ENST00000524165 IGFBP3P17936 291 aaPredicted RBP12.68□□□□□ -0.38
PVT1-220ENST00000524165 PSMB6P28072 239 aa12.68□□□□□ -0.38
PVT1-220ENST00000524165 GBX2P52951 348 aaPredicted RBP12.68□□□□□ -0.38
PVT1-220ENST00000524165 UBE2KP61086 200 aa12.68□□□□□ -0.38
PVT1-220ENST00000524165 SNRPGP62308 76 aaKnown RBP12.68□□□□□ -0.38
PVT1-220ENST00000524165 TAGLNQ01995 201 aaKnown RBP12.68□□□□□ -0.38
PVT1-220ENST00000524165 TMEM187Q14656 261 aa12.68□□□□□ -0.38
PVT1-220ENST00000524165 VMA21Q3ZAQ7 101 aa12.68□□□□□ -0.38
PVT1-220ENST00000524165 Q6ZRM9 215 aa12.68□□□□□ -0.38
PVT1-220ENST00000524165 MOB1BQ7L9L4 216 aa12.68□□□□□ -0.38
PVT1-220ENST00000524165 APRG1Q8IVJ8 170 aa12.68□□□□□ -0.38
PVT1-220ENST00000524165 NDUFAF3Q9BU61 184 aa12.68□□□□□ -0.38
PVT1-220ENST00000524165 OR1A1Q9P1Q5 309 aa12.68□□□□□ -0.38
PVT1-220ENST00000524165 AGRNO00468 2067 aa12.68□□□□□ -0.38
PVT1-220ENST00000524165 IGLV2-18A0A075B6J9 118 aa12.67□□□□□ -0.38
PVT1-220ENST00000524165 DYNC1I1O14576 645 aa12.67□□□□□ -0.38
PVT1-220ENST00000524165 NAPSAO96009 420 aa12.67□□□□□ -0.38
PVT1-220ENST00000524165 GSTT2P0CG29 244 aa12.67□□□□□ -0.38
PVT1-220ENST00000524165 GSTT2BP0CG30 244 aa12.67□□□□□ -0.38
PVT1-220ENST00000524165 POLR2IP36954 125 aaKnown RBP12.67□□□□□ -0.38
PVT1-220ENST00000524165 AWAT2Q6E213 333 aa12.67□□□□□ -0.38
PVT1-220ENST00000524165 ZDHHC13Q8IUH4 622 aa12.67□□□□□ -0.38
PVT1-220ENST00000524165 TRUB1Q8WWH5 349 aaKnown RBP12.67□□□□□ -0.38
PVT1-220ENST00000524165 EEF1AKMT3Q96AZ1 226 aa12.67□□□□□ -0.38
PVT1-220ENST00000524165 IMPAD1Q9NX62 359 aa12.67□□□□□ -0.38
PVT1-220ENST00000524165 G3V2T6 193 aa12.66□□□□□ -0.38
PVT1-220ENST00000524165 IFNA10P01566 189 aa12.66□□□□□ -0.38
PVT1-220ENST00000524165 CMC4P56277 68 aaPredicted RBP12.66□□□□□ -0.38
PVT1-220ENST00000524165 ORAI1Q96D31 301 aa12.66□□□□□ -0.38
PVT1-220ENST00000524165 CREBL2O60519 120 aaPredicted RBP12.65□□□□□ -0.38
PVT1-220ENST00000524165 ACTL6BO94805 426 aa12.65□□□□□ -0.38
PVT1-220ENST00000524165 CA1P00915 261 aaPredicted RBP12.65□□□□□ -0.38
PVT1-220ENST00000524165 CD74P04233 296 aa12.65□□□□□ -0.38
PVT1-220ENST00000524165 RBMY1A1P0DJD3 496 aaKnown RBP12.65□□□□□ -0.38
PVT1-220ENST00000524165 RBMY1CP0DJD4 496 aa12.65□□□□□ -0.38
PVT1-220ENST00000524165 RTL8BQ17RB0 113 aa12.65□□□□□ -0.38
PVT1-220ENST00000524165 IDO2Q6ZQW0 420 aa12.65□□□□□ -0.38
PVT1-220ENST00000524165 JAGN1Q8N5M9 183 aa12.65□□□□□ -0.38
PVT1-220ENST00000524165 LGALS12Q96DT0 336 aa12.65□□□□□ -0.38
PVT1-220ENST00000524165 NEDD4LQ96PU5 975 aa12.65□□□□□ -0.38
PVT1-220ENST00000524165 CIB1Q99828 191 aa12.65□□□□□ -0.38
PVT1-220ENST00000524165 FAAP24Q9BTP7 215 aa12.65□□□□□ -0.38
PVT1-220ENST00000524165 GABARAPL3Q9BY60 117 aa12.65□□□□□ -0.38
PVT1-220ENST00000524165 GABARAPL1Q9H0R8 117 aa12.65□□□□□ -0.38
PVT1-220ENST00000524165 S4R3C0 116 aa12.65□□□□□ -0.38
PVT1-220ENST00000524165 SRRM2Q9UQ35 2752 aaKnown RBP12.64□□□□□ -0.39
PVT1-220ENST00000524165 DEFB131BA0A096LNP1 70 aa12.64□□□□□ -0.39
PVT1-220ENST00000524165 TRBV7-1A0A0A6YYK4 115 aa12.64□□□□□ -0.39
PVT1-220ENST00000524165 NPIPB5A8MRT5 1133 aa12.64□□□□□ -0.39
PVT1-220ENST00000524165 IFNA21P01568 189 aa12.64□□□□□ -0.39
PVT1-220ENST00000524165 IFNA17P01571 189 aa12.64□□□□□ -0.39
PVT1-220ENST00000524165 CLEC3BP05452 202 aa12.64□□□□□ -0.39
PVT1-220ENST00000524165 RRASP10301 218 aa12.64□□□□□ -0.39
PVT1-220ENST00000524165 GTF2A1P52655 376 aaPredicted RBP12.64□□□□□ -0.39
PVT1-220ENST00000524165 ZNF124Q15973 351 aa12.64□□□□□ -0.39
PVT1-220ENST00000524165 KLK9Q2XQG4 91 aa12.64□□□□□ -0.39
PVT1-220ENST00000524165 MEDAGQ5VYS4 303 aa12.64□□□□□ -0.39
PVT1-220ENST00000524165 SPATA24Q86W54 205 aa12.64□□□□□ -0.39
PVT1-220ENST00000524165 CDH26Q8IXH8 852 aa12.64□□□□□ -0.39
PVT1-220ENST00000524165 SETD6Q8TBK2 473 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms