RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 G3V318 75 aa16.32■□□□□ 0.2
TRAPPC9-215ENST00000524162 SHOXO15266 292 aa16.32■□□□□ 0.2
TRAPPC9-215ENST00000524162 SLC25A17O43808 307 aa16.32■□□□□ 0.2
TRAPPC9-215ENST00000524162 TGP01266 2768 aa16.32■□□□□ 0.2
TRAPPC9-215ENST00000524162 IGKV1-13P0DP09 117 aa16.32■□□□□ 0.2
TRAPPC9-215ENST00000524162 EGR2P11161 476 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC9-215ENST00000524162 PRSS3P35030 304 aa16.32■□□□□ 0.2
TRAPPC9-215ENST00000524162 RUNX1Q01196 453 aa16.32■□□□□ 0.2
TRAPPC9-215ENST00000524162 ZNF66Q6ZN08 573 aa16.32■□□□□ 0.2
TRAPPC9-215ENST00000524162 BVESQ8NE79 360 aa16.32■□□□□ 0.2
TRAPPC9-215ENST00000524162 KLHL30-AS1Q8NEE0 82 aa16.32■□□□□ 0.2
TRAPPC9-215ENST00000524162 OR5M8Q8NGP6 311 aa16.32■□□□□ 0.2
TRAPPC9-215ENST00000524162 C4orf3Q8WVX3 66 aa16.32■□□□□ 0.2
TRAPPC9-215ENST00000524162 BORCS5Q969J3 196 aa16.32■□□□□ 0.2
TRAPPC9-215ENST00000524162 TMEM68Q96MH6 324 aa16.32■□□□□ 0.2
TRAPPC9-215ENST00000524162 GPR61Q9BZJ8 451 aa16.32■□□□□ 0.2
TRAPPC9-215ENST00000524162 IFT46Q9NQC8 304 aa16.32■□□□□ 0.2
TRAPPC9-215ENST00000524162 COMMD3Q9UBI1 195 aa16.32■□□□□ 0.2
TRAPPC9-215ENST00000524162 FOXA2Q9Y261 457 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC9-215ENST00000524162 MRPS7Q9Y2R9 242 aaKnown RBP16.32■□□□□ 0.2
TRAPPC9-215ENST00000524162 NUDT19A8MXV4 375 aa16.31■□□□□ 0.2
TRAPPC9-215ENST00000524162 G3V4G9 280 aa16.31■□□□□ 0.2
TRAPPC9-215ENST00000524162 PPYP01298 95 aa16.31■□□□□ 0.2
TRAPPC9-215ENST00000524162 EIF4EP06730 217 aaKnown RBP16.31■□□□□ 0.2
TRAPPC9-215ENST00000524162 FCGR2CP31995 323 aa16.31■□□□□ 0.2
TRAPPC9-215ENST00000524162 TAS2R46P59540 309 aa16.31■□□□□ 0.2
TRAPPC9-215ENST00000524162 UBE2KP61086 200 aa16.31■□□□□ 0.2
TRAPPC9-215ENST00000524162 CDK10Q15131 360 aa16.31■□□□□ 0.2
TRAPPC9-215ENST00000524162 TMEM65Q6PI78 240 aa16.31■□□□□ 0.2
TRAPPC9-215ENST00000524162 DHRS11Q6UWP2 260 aa16.31■□□□□ 0.2
TRAPPC9-215ENST00000524162 MRPL41Q8IXM3 137 aaKnown RBP16.31■□□□□ 0.2
TRAPPC9-215ENST00000524162 NAA50Q9GZZ1 169 aaKnown RBP16.31■□□□□ 0.2
TRAPPC9-215ENST00000524162 FBXO7Q9Y3I1 522 aa16.31■□□□□ 0.2
TRAPPC9-215ENST00000524162 WSB1Q9Y6I7 421 aa16.31■□□□□ 0.2
TRAPPC9-215ENST00000524162 SULT1C2O00338 296 aa16.3■□□□□ 0.2
TRAPPC9-215ENST00000524162 BRI3O95415 125 aa16.3■□□□□ 0.2
TRAPPC9-215ENST00000524162 CA2P00918 260 aa16.3■□□□□ 0.2
TRAPPC9-215ENST00000524162 KIAA0141Q14154 515 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC9-215ENST00000524162 VMA21Q3ZAQ7 101 aa16.3■□□□□ 0.2
TRAPPC9-215ENST00000524162 C8orf86Q6ZUL3 223 aa16.3■□□□□ 0.2
TRAPPC9-215ENST00000524162 KCTD9Q7L273 389 aa16.3■□□□□ 0.2
TRAPPC9-215ENST00000524162 REC114Q7Z4M0 266 aa16.3■□□□□ 0.2
TRAPPC9-215ENST00000524162 GPX8Q8TED1 209 aa16.3■□□□□ 0.2
TRAPPC9-215ENST00000524162 RAB2BQ8WUD1 216 aa16.3■□□□□ 0.2
TRAPPC9-215ENST00000524162 ARPC1AQ92747 370 aa16.3■□□□□ 0.2
TRAPPC9-215ENST00000524162 MCRIP2Q9BUT9 160 aaKnown RBP16.3■□□□□ 0.2
TRAPPC9-215ENST00000524162 SRRM4A7MD48 611 aaKnown RBP16.29■□□□□ 0.2
TRAPPC9-215ENST00000524162 CREBL2O60519 120 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC9-215ENST00000524162 CRYZL1O95825 349 aa16.29■□□□□ 0.2
TRAPPC9-215ENST00000524162 PTHLHP12272 177 aa16.29■□□□□ 0.2
TRAPPC9-215ENST00000524162 AADACP22760 399 aa16.29■□□□□ 0.2
TRAPPC9-215ENST00000524162 RAB9AP51151 201 aa16.29■□□□□ 0.2
TRAPPC9-215ENST00000524162 TMBIM6P55061 237 aa16.29■□□□□ 0.2
TRAPPC9-215ENST00000524162 DYRK1AQ13627 763 aa16.29■□□□□ 0.2
TRAPPC9-215ENST00000524162 PDLIM3Q53GG5 364 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC9-215ENST00000524162 ZNF491Q8N8L2 437 aa16.29■□□□□ 0.2
TRAPPC9-215ENST00000524162 C15orf40Q8WUR7 153 aa16.29■□□□□ 0.2
TRAPPC9-215ENST00000524162 SLA2Q9H6Q3 261 aa16.29■□□□□ 0.2
TRAPPC9-215ENST00000524162 VSIG4Q9Y279 399 aa16.29■□□□□ 0.2
TRAPPC9-215ENST00000524162 H3BUA1 57 aa16.28■□□□□ 0.2
TRAPPC9-215ENST00000524162 CCL24O00175 119 aa16.28■□□□□ 0.2
TRAPPC9-215ENST00000524162 ELK1P19419 428 aa16.28■□□□□ 0.2
TRAPPC9-215ENST00000524162 KIR2DS2P43631 304 aa16.28■□□□□ 0.2
TRAPPC9-215ENST00000524162 RPL5P46777 297 aaKnown RBP16.28■□□□□ 0.2
TRAPPC9-215ENST00000524162 SSBP2P81877 361 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC9-215ENST00000524162 FHL3Q13643 280 aa16.28■□□□□ 0.2
TRAPPC9-215ENST00000524162 FXYD3Q14802 87 aa16.28■□□□□ 0.2
TRAPPC9-215ENST00000524162 ACTBL2Q562R1 376 aa16.28■□□□□ 0.2
TRAPPC9-215ENST00000524162 OR4S2Q8NH73 311 aa16.28■□□□□ 0.2
TRAPPC9-215ENST00000524162 RBFOX2O43251 390 aaKnown RBP eCLIP16.27■□□□□ 0.2
TRAPPC9-215ENST00000524162 WIPF1O43516 503 aa16.27■□□□□ 0.2
TRAPPC9-215ENST00000524162 SOX15O60248 233 aa16.27■□□□□ 0.2
TRAPPC9-215ENST00000524162 CD40LGP29965 261 aa16.27■□□□□ 0.2
TRAPPC9-215ENST00000524162 RPL30P62888 115 aaKnown RBP16.27■□□□□ 0.2
TRAPPC9-215ENST00000524162 ECSCRQ19T08 205 aa16.27■□□□□ 0.2
TRAPPC9-215ENST00000524162 OXLD1Q5BKU9 147 aa16.27■□□□□ 0.2
TRAPPC9-215ENST00000524162 C18orf65Q6ZTR6 163 aa16.27■□□□□ 0.2
TRAPPC9-215ENST00000524162 MFSD4AQ8N468 514 aa16.27■□□□□ 0.2
TRAPPC9-215ENST00000524162 RAX2Q96IS3 184 aa16.27■□□□□ 0.2
TRAPPC9-215ENST00000524162 AIFM2Q9BRQ8 373 aa16.27■□□□□ 0.2
TRAPPC9-215ENST00000524162 KLK15Q9H2R5 256 aa16.27■□□□□ 0.2
TRAPPC9-215ENST00000524162 TPSG1Q9NRR2 321 aa16.27■□□□□ 0.2
TRAPPC9-215ENST00000524162 A0A1W2PN81 502 aa16.26■□□□□ 0.19
TRAPPC9-215ENST00000524162 I3L521 148 aa16.26■□□□□ 0.19
TRAPPC9-215ENST00000524162 ARPC1BO15143 372 aaKnown RBP16.26■□□□□ 0.19
TRAPPC9-215ENST00000524162 HPGDSO60760 199 aa16.26■□□□□ 0.19
TRAPPC9-215ENST00000524162 FCGR3BO75015 233 aa16.26■□□□□ 0.19
TRAPPC9-215ENST00000524162 CHRNA7P36544 502 aa16.26■□□□□ 0.19
TRAPPC9-215ENST00000524162 PRSS8Q16651 343 aa16.26■□□□□ 0.19
TRAPPC9-215ENST00000524162 MRGPRG-AS1Q2M3A8 158 aa16.26■□□□□ 0.19
TRAPPC9-215ENST00000524162 UNQ5815/PRO19632Q6UWF5 114 aa16.26■□□□□ 0.19
TRAPPC9-215ENST00000524162 LCNL1Q6ZST4 164 aa16.26■□□□□ 0.19
TRAPPC9-215ENST00000524162 C1QL4Q86Z23 238 aa16.26■□□□□ 0.19
TRAPPC9-215ENST00000524162 LFNGQ8NES3 379 aa16.26■□□□□ 0.19
TRAPPC9-215ENST00000524162 VSTM2AQ8TAG5 236 aa16.26■□□□□ 0.19
TRAPPC9-215ENST00000524162 SECTM1Q8WVN6 248 aa16.26■□□□□ 0.19
TRAPPC9-215ENST00000524162 EHFQ9NZC4 300 aa16.26■□□□□ 0.19
TRAPPC9-215ENST00000524162 J3QRK9 145 aa16.25■□□□□ 0.19
TRAPPC9-215ENST00000524162 CNIH1O95406 144 aa16.25■□□□□ 0.19
TRAPPC9-215ENST00000524162 PJVKQ0ZLH3 352 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms