RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 COL12A1Q99715 3063 aa16.97■□□□□ 0.31
SQLE-206ENST00000523430 GPR37O15354 613 aa16.97■□□□□ 0.31
SQLE-206ENST00000523430 JTBO76095 146 aa16.97■□□□□ 0.31
SQLE-206ENST00000523430 F12P00748 615 aaPredicted RBP16.97■□□□□ 0.31
SQLE-206ENST00000523430 UBE2KP61086 200 aa16.97■□□□□ 0.31
SQLE-206ENST00000523430 CLINT1Q14677 625 aa16.97■□□□□ 0.31
SQLE-206ENST00000523430 OR10X1Q8NGY0 326 aa16.97■□□□□ 0.31
SQLE-206ENST00000523430 ZNF596Q8TC21 504 aa16.97■□□□□ 0.31
SQLE-206ENST00000523430 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.97■□□□□ 0.31
SQLE-206ENST00000523430 WSB1Q9Y6I7 421 aa16.97■□□□□ 0.31
SQLE-206ENST00000523430 SESN1Q9Y6P5 492 aa16.97■□□□□ 0.31
SQLE-206ENST00000523430 PPIAL4CA0A0B4J2A2 164 aa16.96■□□□□ 0.31
SQLE-206ENST00000523430 TEX46H3BTG2 121 aa16.96■□□□□ 0.31
SQLE-206ENST00000523430 TXNL1O43396 289 aa16.96■□□□□ 0.31
SQLE-206ENST00000523430 PPIAL4GP0DN37 164 aa16.96■□□□□ 0.31
SQLE-206ENST00000523430 REG1BP48304 166 aa16.96■□□□□ 0.31
SQLE-206ENST00000523430 RPL23AP62750 156 aaKnown RBP16.96■□□□□ 0.31
SQLE-206ENST00000523430 PDZD9Q8IXQ8 264 aa16.96■□□□□ 0.31
SQLE-206ENST00000523430 TMEM217Q8N7C4 229 aa16.96■□□□□ 0.31
SQLE-206ENST00000523430 C8orf31Q8N9H6 132 aa16.96■□□□□ 0.31
SQLE-206ENST00000523430 C8orf46Q8TAG6 207 aa16.96■□□□□ 0.31
SQLE-206ENST00000523430 TMEM133Q9H2Q1 129 aa16.96■□□□□ 0.31
SQLE-206ENST00000523430 RBMXL2O75526 392 aaKnown RBP16.95■□□□□ 0.3
SQLE-206ENST00000523430 NQO2P16083 231 aa16.95■□□□□ 0.3
SQLE-206ENST00000523430 S100A1P23297 94 aa16.95■□□□□ 0.3
SQLE-206ENST00000523430 GPR6P46095 362 aaPredicted RBP16.95■□□□□ 0.3
SQLE-206ENST00000523430 EFNA4P52798 201 aa16.95■□□□□ 0.3
SQLE-206ENST00000523430 ERVK-16P61578 105 aa16.95■□□□□ 0.3
SQLE-206ENST00000523430 DIAPH2-AS1Q14236 149 aa16.95■□□□□ 0.3
SQLE-206ENST00000523430 SPINK9Q5DT21 86 aa16.95■□□□□ 0.3
SQLE-206ENST00000523430 ABHD12Q8N2K0 398 aa16.95■□□□□ 0.3
SQLE-206ENST00000523430 LINC00311Q8N616 119 aa16.95■□□□□ 0.3
SQLE-206ENST00000523430 UBAC2Q8NBM4 344 aa16.95■□□□□ 0.3
SQLE-206ENST00000523430 QTRT1Q9BXR0 403 aaKnown RBP16.95■□□□□ 0.3
SQLE-206ENST00000523430 PATZ1Q9HBE1 687 aaKnown RBP16.95■□□□□ 0.3
SQLE-206ENST00000523430 TMEM140Q9NV12 185 aa16.95■□□□□ 0.3
SQLE-206ENST00000523430 PSENENQ9NZ42 101 aa16.95■□□□□ 0.3
SQLE-206ENST00000523430 RRASP10301 218 aa16.95■□□□□ 0.3
SQLE-206ENST00000523430 DYNLT3P51808 116 aa16.95■□□□□ 0.3
SQLE-206ENST00000523430 GNB2P62879 340 aa16.95■□□□□ 0.3
SQLE-206ENST00000523430 EIF5AP63241 154 aaKnown RBP16.95■□□□□ 0.3
SQLE-206ENST00000523430 BAXQ07812 192 aa16.95■□□□□ 0.3
SQLE-206ENST00000523430 OR5C1Q8NGR4 320 aa16.95■□□□□ 0.3
SQLE-206ENST00000523430 OR9G1Q8NH87 305 aa16.95■□□□□ 0.3
SQLE-206ENST00000523430 ZDHHC16Q969W1 377 aa16.95■□□□□ 0.3
SQLE-206ENST00000523430 DOPEY1Q5JWR5 2465 aa16.94■□□□□ 0.3
SQLE-206ENST00000523430 TRAV3A0A0B4J244 114 aa16.94■□□□□ 0.3
SQLE-206ENST00000523430 IGKV1-16P04430 117 aa16.94■□□□□ 0.3
SQLE-206ENST00000523430 FLNCQ14315 2725 aa16.94■□□□□ 0.3
SQLE-206ENST00000523430 OVOL3O00110 214 aa16.93■□□□□ 0.3
SQLE-206ENST00000523430 FBXO24O75426 580 aa16.93■□□□□ 0.3
SQLE-206ENST00000523430 STX12Q86Y82 276 aa16.93■□□□□ 0.3
SQLE-206ENST00000523430 LY6G5BQ8NDX9 201 aa16.93■□□□□ 0.3
SQLE-206ENST00000523430 SMIM8Q96KF7 97 aa16.93■□□□□ 0.3
SQLE-206ENST00000523430 SSBP3Q9BWW4 388 aaPredicted RBP16.93■□□□□ 0.3
SQLE-206ENST00000523430 ARV1Q9H2C2 271 aa16.93■□□□□ 0.3
SQLE-206ENST00000523430 BARX1Q9HBU1 254 aaPredicted RBP16.93■□□□□ 0.3
SQLE-206ENST00000523430 SLC35D1Q9NTN3 355 aa16.93■□□□□ 0.3
SQLE-206ENST00000523430 ONECUT1Q9UBC0 465 aa16.93■□□□□ 0.3
SQLE-206ENST00000523430 KLF2Q9Y5W3 355 aaPredicted RBP16.93■□□□□ 0.3
SQLE-206ENST00000523430 BORCS7-ASMTA0A0B4J1R7 106 aa16.93■□□□□ 0.3
SQLE-206ENST00000523430 IGHV2-26A0A0B4J1V2 119 aa16.93■□□□□ 0.3
SQLE-206ENST00000523430 A0A1W2PPH5 198 aa16.93■□□□□ 0.3
SQLE-206ENST00000523430 ANKRD34BA5PLL1 514 aa16.93■□□□□ 0.3
SQLE-206ENST00000523430 ZNF525Q8N782 197 aa16.93■□□□□ 0.3
SQLE-206ENST00000523430 ZNF462Q96JM2 2506 aa16.92■□□□□ 0.3
SQLE-206ENST00000523430 FAM90A9PA6NNJ1 464 aa16.92■□□□□ 0.3
SQLE-206ENST00000523430 METTL15P1P0C7V9 234 aa16.92■□□□□ 0.3
SQLE-206ENST00000523430 SULT1A1P50225 295 aa16.92■□□□□ 0.3
SQLE-206ENST00000523430 TLE4Q04727 773 aa16.92■□□□□ 0.3
SQLE-206ENST00000523430 SRSF1Q07955 248 aaKnown RBP eCLIP16.92■□□□□ 0.3
SQLE-206ENST00000523430 RTL8BQ17RB0 113 aa16.92■□□□□ 0.3
SQLE-206ENST00000523430 SPANXN5Q5MJ07 72 aa16.92■□□□□ 0.3
SQLE-206ENST00000523430 OR4A47Q6IF82 309 aa16.92■□□□□ 0.3
SQLE-206ENST00000523430 ST6GALNAC6Q969X2 333 aa16.92■□□□□ 0.3
SQLE-206ENST00000523430 SH3BGRL3Q9H299 93 aa16.92■□□□□ 0.3
SQLE-206ENST00000523430 PLA2G2EQ9NZK7 142 aa16.92■□□□□ 0.3
SQLE-206ENST00000523430 USP9XQ93008 2570 aaPredicted RBP16.92■□□□□ 0.3
SQLE-206ENST00000523430 EPG5Q9HCE0 2579 aa16.92■□□□□ 0.3
SQLE-206ENST00000523430 H0YJW9 148 aa16.91■□□□□ 0.3
SQLE-206ENST00000523430 MED6O75586 246 aa16.91■□□□□ 0.3
SQLE-206ENST00000523430 GOSR1O95249 250 aa16.91■□□□□ 0.3
SQLE-206ENST00000523430 LIPFP07098 398 aa16.91■□□□□ 0.3
SQLE-206ENST00000523430 ZNF137PP52743 207 aa16.91■□□□□ 0.3
SQLE-206ENST00000523430 TAS2R30P59541 319 aa16.91■□□□□ 0.3
SQLE-206ENST00000523430 RELBQ01201 579 aa16.91■□□□□ 0.3
SQLE-206ENST00000523430 AARDQ4LEZ3 155 aa16.91■□□□□ 0.3
SQLE-206ENST00000523430 FAM71F2Q6NXP2 309 aa16.91■□□□□ 0.3
SQLE-206ENST00000523430 HAPLN4Q86UW8 402 aa16.91■□□□□ 0.3
SQLE-206ENST00000523430 HSD17B11Q8NBQ5 300 aa16.91■□□□□ 0.3
SQLE-206ENST00000523430 OR13D1Q8NGV5 346 aa16.91■□□□□ 0.3
SQLE-206ENST00000523430 DTD1Q8TEA8 209 aa16.91■□□□□ 0.3
SQLE-206ENST00000523430 IGFBPL1Q8WX77 278 aa16.91■□□□□ 0.3
SQLE-206ENST00000523430 RHOVQ96L33 236 aa16.91■□□□□ 0.3
SQLE-206ENST00000523430 GINS3Q9BRX5 216 aa16.91■□□□□ 0.3
SQLE-206ENST00000523430 MALRD1Q5VYJ5 2156 aa16.91■□□□□ 0.3
SQLE-206ENST00000523430 FGF16O43320 207 aa16.9■□□□□ 0.3
SQLE-206ENST00000523430 RBP4P02753 201 aa16.9■□□□□ 0.3
SQLE-206ENST00000523430 FAM157CP0CG43 387 aa16.9■□□□□ 0.3
SQLE-206ENST00000523430 COX7A1P24310 79 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms