RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 H0Y8G0 127 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 ZG16O60844 167 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 IL18BPO95998 194 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 PPIAL4GP0DN37 164 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 APOBEC3AP31941 199 aaPredicted RBP11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 SPCS3P61009 180 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 RPL39P5Q59GN2 51 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 TCTEX1D1Q8N7M0 179 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 OR4X1Q8NH49 305 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 PLPPR1Q8TBJ4 325 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 AQP10Q96PS8 301 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 RTBDNQ9BSG5 229 aaPredicted RBP11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 ZDHHC11Q9H8X9 412 aa11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 TECRQ9NZ01 308 aaKnown RBP11.07□□□□□ -0.64
PCDHGB1-201ENST00000523390 IGKV1D-8A0A087WSZ0 117 aa11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 MSGN1A6NI15 193 aa11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 IFNL4K9M1U5 179 aa11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 NTF3P20783 257 aa11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 HCP5Q6MZN7 132 aa11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 PNRC2Q9NPJ4 139 aaKnown RBP11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 TMEM106BQ9NUM4 274 aa11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 LGALS7P47929 136 aa11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 OR5I1Q13606 314 aa11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 LY6DQ14210 128 aa11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 CLEC2AQ6UVW9 174 aa11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 ZNF561Q8N587 486 aa11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 OR4C12Q96R67 309 aa11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 ASCL3Q9NQ33 180 aa11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 PGA5P0DJD9 388 aa11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 MUC1P15941 1255 aaPredicted RBP11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 SULT1A2P50226 295 aa11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 GAMTQ14353 236 aa11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 ECSCRQ19T08 205 aa11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 SLC35E3Q7Z769 313 aa11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 ABHD12Q8N2K0 398 aa11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 CTXND1A0A1B0GTU2 59 aa11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 ZNF729A6NN14 1252 aaPredicted RBP11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 SPP1P10451 314 aa11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 GNG4P50150 75 aa11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 FAM89BQ8N5H3 189 aa11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 TMEM37Q8WXS4 190 aa11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 SNRNP40Q96DI7 357 aaKnown RBP11.06□□□□□ -0.64
PCDHGB1-201ENST00000523390 PLXNB3Q9ULL4 1909 aa11.05□□□□□ -0.64
PCDHGB1-201ENST00000523390 IGHV1-18A0A0C4DH31 117 aa11.05□□□□□ -0.64
PCDHGB1-201ENST00000523390 RPL8P62917 257 aaKnown RBP11.05□□□□□ -0.64
PCDHGB1-201ENST00000523390 TNFRSF9Q07011 255 aa11.05□□□□□ -0.64
PCDHGB1-201ENST00000523390 PUSL1Q8N0Z8 303 aaKnown RBP11.05□□□□□ -0.64
PCDHGB1-201ENST00000523390 MRPL30Q8TCC3 161 aaKnown RBP11.05□□□□□ -0.64
PCDHGB1-201ENST00000523390 MRPL37Q9BZE1 423 aaKnown RBP11.05□□□□□ -0.64
PCDHGB1-201ENST00000523390 LTBP2Q14767 1821 aa11.05□□□□□ -0.64
PCDHGB1-201ENST00000523390 CCDC144NLQ6NUI1 221 aa11.05□□□□□ -0.64
PCDHGB1-201ENST00000523390 LYRM2Q9NU23 88 aaPredicted RBP11.05□□□□□ -0.64
PCDHGB1-201ENST00000523390 VAX2Q9UIW0 290 aa11.05□□□□□ -0.64
PCDHGB1-201ENST00000523390 LRRK1Q38SD2 2015 aa11.05□□□□□ -0.64
PCDHGB1-201ENST00000523390 TSTD3H0UI37 97 aa11.05□□□□□ -0.64
PCDHGB1-201ENST00000523390 MMP9P14780 707 aa11.05□□□□□ -0.64
PCDHGB1-201ENST00000523390 MC5RP33032 325 aa11.05□□□□□ -0.64
PCDHGB1-201ENST00000523390 BSXQ3C1V8 233 aa11.05□□□□□ -0.64
PCDHGB1-201ENST00000523390 AURKAIP1Q9NWT8 199 aaPredicted RBP11.05□□□□□ -0.64
PCDHGB1-201ENST00000523390 WASHC3Q9Y3C0 194 aa11.05□□□□□ -0.64
PCDHGB1-201ENST00000523390 PTPRQQ9UMZ3 2332 aa11.05□□□□□ -0.64
PCDHGB1-201ENST00000523390 DBX1A6NMT0 343 aa11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 CD8AP01732 235 aa11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 PAX5Q02548 391 aa11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 AP1S3Q96PC3 154 aa11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 NPVFQ9HCQ7 196 aa11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 IGKV1-27A0A075B6S5 117 aa11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 SERTM2A0A1B0GWG4 89 aa11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 C7orf77A4D0Y5 90 aa11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 M0QZ24 198 aa11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 OR10J1P30954 320 aa11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 SRP14P37108 136 aaKnown RBP11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 KIAA1671Q9BY89 1806 aa11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 IGKV1D-13A0A0B4J2D9 117 aa11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 IGKV1-13P0DP09 117 aa11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 PLA2G2CQ5R387 149 aa11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 LINC00518Q8N0U6 118 aa11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 OR9G1Q8NH87 305 aa11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 LILRB1Q8NHL6 650 aaPredicted RBP11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 STARD4Q96DR4 205 aa11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 GALNT14Q96FL9 552 aa11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 LURAP1Q96LR2 239 aa11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 TMEM204Q9BSN7 226 aa11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 TMEM167BQ9NRX6 74 aa11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 TCF19Q9Y242 345 aa11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 C17orf100A8MU93 164 aa11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 LRP11Q86VZ4 500 aa11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 METTL1Q9UBP6 276 aaKnown RBP11.04□□□□□ -0.64
PCDHGB1-201ENST00000523390 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 CRYBA1P05813 215 aa11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 HSPE1P61604 102 aaKnown RBP11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 WDR82Q6UXN9 313 aa11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 IL22RA2Q969J5 263 aa11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 PROK2Q9HC23 129 aa11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 PLCE1Q9P212 2302 aa11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 TRAV24A0A0B4J272 114 aa11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 GALR1P47211 349 aa11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 MEOX2P50222 304 aa11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 SERF2P84101 59 aa11.03□□□□□ -0.64
PCDHGB1-201ENST00000523390 HIST3H3Q16695 136 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms