RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 C11orf54Q9H0W9 315 aaPredicted RBP7.18□□□□□ -1.26
SDC2-207ENST00000522911 DCSTAMPQ9H295 470 aa7.18□□□□□ -1.26
SDC2-207ENST00000522911 METTL1Q9UBP6 276 aaKnown RBP7.18□□□□□ -1.26
SDC2-207ENST00000522911 ALMS1Q8TCU4 4167 aa7.17□□□□□ -1.26
SDC2-207ENST00000522911 H7C2Y5 167 aa7.17□□□□□ -1.26
SDC2-207ENST00000522911 CA2P00918 260 aa7.17□□□□□ -1.26
SDC2-207ENST00000522911 TRGV3P03979 118 aa7.17□□□□□ -1.26
SDC2-207ENST00000522911 CRYGBP07316 175 aa7.17□□□□□ -1.26
SDC2-207ENST00000522911 SRMP19623 302 aa7.17□□□□□ -1.26
SDC2-207ENST00000522911 MAP2K4P45985 399 aa7.17□□□□□ -1.26
SDC2-207ENST00000522911 MECP2P51608 486 aaKnown RBP7.17□□□□□ -1.26
SDC2-207ENST00000522911 VBP1P61758 197 aa7.17□□□□□ -1.26
SDC2-207ENST00000522911 HLA-DRB3P79483 266 aa7.17□□□□□ -1.26
SDC2-207ENST00000522911 ACSM3Q53FZ2 586 aa7.17□□□□□ -1.26
SDC2-207ENST00000522911 ZNF343Q6P1L6 599 aa7.17□□□□□ -1.26
SDC2-207ENST00000522911 AHSA2Q719I0 299 aa7.17□□□□□ -1.26
SDC2-207ENST00000522911 LAX1Q8IWV1 398 aa7.17□□□□□ -1.26
SDC2-207ENST00000522911 OR6M1Q8NGM8 313 aa7.17□□□□□ -1.26
SDC2-207ENST00000522911 OR9G4Q8NGQ1 327 aa7.17□□□□□ -1.26
SDC2-207ENST00000522911 ABHD14BQ96IU4 210 aa7.17□□□□□ -1.26
SDC2-207ENST00000522911 USMG5Q96IX5 58 aa7.17□□□□□ -1.26
SDC2-207ENST00000522911 CYYR1Q96J86 154 aa7.17□□□□□ -1.26
SDC2-207ENST00000522911 CCDC32Q9BV29 185 aa7.17□□□□□ -1.26
SDC2-207ENST00000522911 PARP12Q9H0J9 701 aaKnown RBP7.17□□□□□ -1.26
SDC2-207ENST00000522911 LPAR5Q9H1C0 372 aa7.17□□□□□ -1.26
SDC2-207ENST00000522911 C12orf4Q9NQ89 552 aa7.17□□□□□ -1.26
SDC2-207ENST00000522911 PLEKHJ1Q9NW61 149 aa7.17□□□□□ -1.26
SDC2-207ENST00000522911 A0A0A6YYD4 124 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 C13orf42A0A1B0GVH6 325 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 MYL12BO14950 172 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 OR2A4O95047 310 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 IGLV2-23P01705 113 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 IGHV3-11P01762 117 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 APOA2P02652 100 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 IFNA6P05013 189 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 UCHL1P09936 223 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 CPEP16870 476 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 S100A1P23297 94 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 CEACAM6P40199 344 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 ETV6P41212 452 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 FXYD3Q14802 87 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 SRSF7Q16629 238 aaKnown RBP eCLIP7.16□□□□□ -1.26
SDC2-207ENST00000522911 HAGHQ16775 308 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 FAM209BQ5JX69 171 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 SPANXN2Q5MJ10 180 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 OR10K2Q6IF99 312 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 LCN12Q6JVE5 192 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 GLDNQ6ZMI3 551 aaPredicted RBP7.16□□□□□ -1.26
SDC2-207ENST00000522911 LINC00322Q6ZN03 302 aaPredicted RBP7.16□□□□□ -1.26
SDC2-207ENST00000522911 Q8N402 240 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 ZNF383Q8NA42 475 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 IL17DQ8TAD2 202 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 SETD6Q8TBK2 473 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 CASTOR1Q8WTX7 329 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 NICN1Q9BSH3 213 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 FAM103A1Q9BTL3 118 aaKnown RBP7.16□□□□□ -1.26
SDC2-207ENST00000522911 URM1Q9BTM9 101 aaKnown RBP7.16□□□□□ -1.26
SDC2-207ENST00000522911 CENPOQ9BU64 300 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 TINAGL1Q9GZM7 467 aaPredicted RBP7.16□□□□□ -1.26
SDC2-207ENST00000522911 Q9N2K0 584 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 ZNF221Q9UK13 617 aa7.16□□□□□ -1.26
SDC2-207ENST00000522911 A0A075B6Q4 140 aa7.15□□□□□ -1.26
SDC2-207ENST00000522911 SLC17A2O00624 439 aa7.15□□□□□ -1.26
SDC2-207ENST00000522911 TMEM50BP56557 158 aa7.15□□□□□ -1.26
SDC2-207ENST00000522911 NCS1P62166 190 aa7.15□□□□□ -1.26
SDC2-207ENST00000522911 RPS16P62249 146 aaKnown RBP7.15□□□□□ -1.26
SDC2-207ENST00000522911 TATDN3Q17R31 274 aa7.15□□□□□ -1.26
SDC2-207ENST00000522911 TMEM177Q53S58 311 aa7.15□□□□□ -1.26
SDC2-207ENST00000522911 AKAP14Q86UN6 197 aa7.15□□□□□ -1.26
SDC2-207ENST00000522911 GTSCR1Q86UQ5 136 aa7.15□□□□□ -1.26
SDC2-207ENST00000522911 LYSMD2Q8IV50 215 aa7.15□□□□□ -1.26
SDC2-207ENST00000522911 OR4A4PQ8NGN8 299 aa7.15□□□□□ -1.26
SDC2-207ENST00000522911 ABHD5Q8WTS1 349 aa7.15□□□□□ -1.26
SDC2-207ENST00000522911 MS4A10Q96PG2 267 aa7.15□□□□□ -1.26
SDC2-207ENST00000522911 CABLES2Q9BTV7 478 aa7.15□□□□□ -1.26
SDC2-207ENST00000522911 MND1Q9BWT6 205 aa7.15□□□□□ -1.26
SDC2-207ENST00000522911 CHMP1AQ9HD42 196 aaPredicted RBP7.15□□□□□ -1.26
SDC2-207ENST00000522911 OR1A1Q9P1Q5 309 aa7.15□□□□□ -1.26
SDC2-207ENST00000522911 PEF1Q9UBV8 284 aaKnown RBP7.15□□□□□ -1.26
SDC2-207ENST00000522911 AK3Q9UIJ7 227 aa7.15□□□□□ -1.26
SDC2-207ENST00000522911 LSM2Q9Y333 95 aaKnown RBP7.15□□□□□ -1.26
SDC2-207ENST00000522911 HYDINQ4G0P3 5121 aa7.15□□□□□ -1.26
SDC2-207ENST00000522911 TRBV9A0A0B4J1U6 114 aa7.14□□□□□ -1.27
SDC2-207ENST00000522911 IGKV1-6A0A0C4DH72 117 aa7.14□□□□□ -1.27
SDC2-207ENST00000522911 SOCS1O15524 211 aa7.14□□□□□ -1.27
SDC2-207ENST00000522911 SLC25A17O43808 307 aa7.14□□□□□ -1.27
SDC2-207ENST00000522911 CSN3P07498 182 aa7.14□□□□□ -1.27
SDC2-207ENST00000522911 SCTP09683 121 aa7.14□□□□□ -1.27
SDC2-207ENST00000522911 RRASP10301 218 aa7.14□□□□□ -1.27
SDC2-207ENST00000522911 ARSBP15848 533 aa7.14□□□□□ -1.27
SDC2-207ENST00000522911 LSM3P62310 102 aaKnown RBP7.14□□□□□ -1.27
SDC2-207ENST00000522911 DYRK1AQ13627 763 aa7.14□□□□□ -1.27
SDC2-207ENST00000522911 INSL4Q14641 139 aa7.14□□□□□ -1.27
SDC2-207ENST00000522911 IRF3Q14653 427 aa7.14□□□□□ -1.27
SDC2-207ENST00000522911 P2RY14Q15391 338 aa7.14□□□□□ -1.27
SDC2-207ENST00000522911 HSD17B12Q53GQ0 312 aa7.14□□□□□ -1.27
SDC2-207ENST00000522911 CADM3Q8N126 398 aa7.14□□□□□ -1.27
SDC2-207ENST00000522911 C6orf62Q9GZU0 229 aaPredicted RBP7.14□□□□□ -1.27
SDC2-207ENST00000522911 SLC35D1Q9NTN3 355 aa7.14□□□□□ -1.27
SDC2-207ENST00000522911 RDH8Q9NYR8 311 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms