RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 PAFAH1B2P68402 229 aa11.81□□□□□ -0.52
SYNPO-205ENST00000522122 GCSAMQ8N6F7 178 aa11.81□□□□□ -0.52
SYNPO-205ENST00000522122 Q8WTZ3 238 aa11.81□□□□□ -0.52
SYNPO-205ENST00000522122 FAM216AQ8WUB2 273 aa11.81□□□□□ -0.52
SYNPO-205ENST00000522122 CCL13Q99616 98 aa11.81□□□□□ -0.52
SYNPO-205ENST00000522122 CDCP2Q5VXM1 449 aa11.81□□□□□ -0.52
SYNPO-205ENST00000522122 MRPL13Q9BYD1 178 aaKnown RBP11.81□□□□□ -0.52
SYNPO-205ENST00000522122 GPR61Q9BZJ8 451 aa11.81□□□□□ -0.52
SYNPO-205ENST00000522122 HELZP42694 1942 aaKnown RBP11.8□□□□□ -0.52
SYNPO-205ENST00000522122 TGIF2-C20orf24A0A0A6YYL0 155 aa11.8□□□□□ -0.52
SYNPO-205ENST00000522122 PRR33A8MZF0 331 aa11.8□□□□□ -0.52
SYNPO-205ENST00000522122 MT-ND6P03923 174 aa11.8□□□□□ -0.52
SYNPO-205ENST00000522122 MIC13Q5XKP0 118 aa11.8□□□□□ -0.52
SYNPO-205ENST00000522122 FAM89BQ8N5H3 189 aa11.8□□□□□ -0.52
SYNPO-205ENST00000522122 GSN-AS1Q9NRJ2 163 aa11.8□□□□□ -0.52
SYNPO-205ENST00000522122 C1RLQ9NZP8 487 aa11.8□□□□□ -0.52
SYNPO-205ENST00000522122 TCF20Q9UGU0 1960 aaKnown RBP11.8□□□□□ -0.52
SYNPO-205ENST00000522122 EP300Q09472 2414 aaPredicted RBP11.8□□□□□ -0.52
SYNPO-205ENST00000522122 CD5P06127 495 aa11.8□□□□□ -0.52
SYNPO-205ENST00000522122 PRSS1P07477 247 aa11.8□□□□□ -0.52
SYNPO-205ENST00000522122 HIST1H1BP16401 226 aaKnown RBP11.8□□□□□ -0.52
SYNPO-205ENST00000522122 RSPO4Q2I0M5 234 aaPredicted RBP11.8□□□□□ -0.52
SYNPO-205ENST00000522122 MAP1LC3CQ9BXW4 147 aa11.8□□□□□ -0.52
SYNPO-205ENST00000522122 AHRRA9YTQ3 701 aa11.8□□□□□ -0.52
SYNPO-205ENST00000522122 ZG16O60844 167 aa11.8□□□□□ -0.52
SYNPO-205ENST00000522122 APELAP0DMC3 54 aa11.8□□□□□ -0.52
SYNPO-205ENST00000522122 PQLC2Q6ZP29 291 aa11.8□□□□□ -0.52
SYNPO-205ENST00000522122 GRAMD2BQ96HH9 432 aa11.8□□□□□ -0.52
SYNPO-205ENST00000522122 MARCH11A6NNE9 402 aa11.8□□□□□ -0.52
SYNPO-205ENST00000522122 NAT2P11245 290 aa11.8□□□□□ -0.52
SYNPO-205ENST00000522122 LBHQ53QV2 105 aaPredicted RBP11.8□□□□□ -0.52
SYNPO-205ENST00000522122 ITLN1Q8WWA0 313 aa11.8□□□□□ -0.52
SYNPO-205ENST00000522122 IL36RNQ9UBH0 155 aa11.8□□□□□ -0.52
SYNPO-205ENST00000522122 DIRC3C9JPN6 131 aa11.79□□□□□ -0.52
SYNPO-205ENST00000522122 UBE2CO00762 179 aa11.79□□□□□ -0.52
SYNPO-205ENST00000522122 LYL1P12980 280 aa11.79□□□□□ -0.52
SYNPO-205ENST00000522122 LGALS7P47929 136 aa11.79□□□□□ -0.52
SYNPO-205ENST00000522122 QRFPP83859 136 aa11.79□□□□□ -0.52
SYNPO-205ENST00000522122 ZNF506Q5JVG8 444 aa11.79□□□□□ -0.52
SYNPO-205ENST00000522122 WDR25Q64LD2 544 aaPredicted RBP11.79□□□□□ -0.52
SYNPO-205ENST00000522122 OR1P1Q8NH06 330 aa11.79□□□□□ -0.52
SYNPO-205ENST00000522122 RPRMQ9NS64 109 aa11.79□□□□□ -0.52
SYNPO-205ENST00000522122 RALGAPA1Q6GYQ0 2036 aa11.79□□□□□ -0.52
SYNPO-205ENST00000522122 MED12Q93074 2177 aa11.79□□□□□ -0.52
SYNPO-205ENST00000522122 GOSR1O95249 250 aa11.79□□□□□ -0.52
SYNPO-205ENST00000522122 SELENOTP62341 195 aa11.79□□□□□ -0.52
SYNPO-205ENST00000522122 KLF14Q8TD94 323 aaPredicted RBP11.79□□□□□ -0.52
SYNPO-205ENST00000522122 C18orf12Q96KH6 178 aa11.79□□□□□ -0.52
SYNPO-205ENST00000522122 HEATR5BQ9P2D3 2071 aa11.79□□□□□ -0.52
SYNPO-205ENST00000522122 hCG_38984A0A1B0GV85 526 aa11.79□□□□□ -0.52
SYNPO-205ENST00000522122 CEACAM18A8MTB9 384 aa11.79□□□□□ -0.52
SYNPO-205ENST00000522122 NDUFA2O43678 99 aa11.79□□□□□ -0.52
SYNPO-205ENST00000522122 HYPMO75409 117 aa11.79□□□□□ -0.52
SYNPO-205ENST00000522122 BMI1P35226 326 aa11.79□□□□□ -0.52
SYNPO-205ENST00000522122 SLC35B1P78383 322 aa11.79□□□□□ -0.52
SYNPO-205ENST00000522122 DRAM1Q8N682 238 aa11.79□□□□□ -0.52
SYNPO-205ENST00000522122 FAM222BQ8WU58 562 aa11.79□□□□□ -0.52
SYNPO-205ENST00000522122 ZDHHC16Q969W1 377 aa11.79□□□□□ -0.52
SYNPO-205ENST00000522122 GGACTQ9BVM4 153 aa11.79□□□□□ -0.52
SYNPO-205ENST00000522122 OPN3Q9H1Y3 402 aaPredicted RBP11.79□□□□□ -0.52
SYNPO-205ENST00000522122 FREM3P0C091 2139 aa11.79□□□□□ -0.52
SYNPO-205ENST00000522122 ZNF25P17030 456 aaPredicted RBP11.79□□□□□ -0.52
SYNPO-205ENST00000522122 GLIPR1P48060 266 aa11.79□□□□□ -0.52
SYNPO-205ENST00000522122 HSPE1P61604 102 aaKnown RBP11.79□□□□□ -0.52
SYNPO-205ENST00000522122 OR2T8A6NH00 312 aa11.78□□□□□ -0.52
SYNPO-205ENST00000522122 MMDQ15546 238 aa11.78□□□□□ -0.52
SYNPO-205ENST00000522122 LHFPL1Q86WI0 220 aa11.78□□□□□ -0.52
SYNPO-205ENST00000522122 OR10S1Q8NGN2 331 aa11.78□□□□□ -0.52
SYNPO-205ENST00000522122 ZNF714Q96N38 554 aa11.78□□□□□ -0.52
SYNPO-205ENST00000522122 PSMG3Q9BT73 122 aaPredicted RBP11.78□□□□□ -0.52
SYNPO-205ENST00000522122 COA4Q9NYJ1 87 aa11.78□□□□□ -0.52
SYNPO-205ENST00000522122 S1PR2O95136 353 aa11.78□□□□□ -0.52
SYNPO-205ENST00000522122 GCGP01275 180 aa11.78□□□□□ -0.52
SYNPO-205ENST00000522122 LINC00869P0C866 280 aa11.78□□□□□ -0.52
SYNPO-205ENST00000522122 PTGDSP41222 190 aa11.78□□□□□ -0.52
SYNPO-205ENST00000522122 HSPB9Q9BQS6 159 aa11.78□□□□□ -0.52
SYNPO-205ENST00000522122 LINC00470Q9BZP3 86 aa11.78□□□□□ -0.52
SYNPO-205ENST00000522122 ZNF552Q9H707 407 aaPredicted RBP11.78□□□□□ -0.52
SYNPO-205ENST00000522122 A8MWL6 223 aa11.78□□□□□ -0.52
SYNPO-205ENST00000522122 RPL27AP46776 148 aaKnown RBP11.78□□□□□ -0.52
SYNPO-205ENST00000522122 TGIF1Q15583 401 aa11.78□□□□□ -0.52
SYNPO-205ENST00000522122 PPP1R32Q7Z5V6 425 aa11.78□□□□□ -0.52
SYNPO-205ENST00000522122 TMUB1Q9BVT8 246 aa11.78□□□□□ -0.52
SYNPO-205ENST00000522122 TMEM140Q9NV12 185 aa11.78□□□□□ -0.52
SYNPO-205ENST00000522122 SYNGR3O43761 229 aa11.78□□□□□ -0.52
SYNPO-205ENST00000522122 AGAP20933 346 aa11.78□□□□□ -0.52
SYNPO-205ENST00000522122 ZNF343Q6P1L6 599 aa11.78□□□□□ -0.52
SYNPO-205ENST00000522122 AKIRIN1Q9H9L7 192 aaPredicted RBP11.78□□□□□ -0.52
SYNPO-205ENST00000522122 CALYQ9NYX4 217 aa11.78□□□□□ -0.52
SYNPO-205ENST00000522122 NAGKQ9UJ70 344 aa11.78□□□□□ -0.52
SYNPO-205ENST00000522122 COLCA2A8K830 154 aa11.77□□□□□ -0.52
SYNPO-205ENST00000522122 F5H697 171 aa11.77□□□□□ -0.52
SYNPO-205ENST00000522122 NKX2-8O15522 239 aa11.77□□□□□ -0.52
SYNPO-205ENST00000522122 ORM1P02763 201 aa11.77□□□□□ -0.52
SYNPO-205ENST00000522122 SNRPCP09234 159 aaKnown RBP11.77□□□□□ -0.52
SYNPO-205ENST00000522122 RFPL3SP0C7P2 107 aa11.77□□□□□ -0.52
SYNPO-205ENST00000522122 ADCYAP1P18509 176 aa11.77□□□□□ -0.52
SYNPO-205ENST00000522122 TMEM97Q5BJF2 176 aa11.77□□□□□ -0.52
SYNPO-205ENST00000522122 A0A087WWC5 75 aa11.77□□□□□ -0.53
SYNPO-205ENST00000522122 IGHV3-21A0A0B4J1V1 117 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms