RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 OR5M8Q8NGP6 311 aa7.43□□□□□ -1.22
CLK4-209ENST00000521621 HSPB9Q9BQS6 159 aa7.43□□□□□ -1.22
CLK4-209ENST00000521621 RNF150Q9ULK6 438 aa7.43□□□□□ -1.22
CLK4-209ENST00000521621 IGKV1D-13A0A0B4J2D9 117 aa7.43□□□□□ -1.22
CLK4-209ENST00000521621 IGKV1-13P0DP09 117 aa7.43□□□□□ -1.22
CLK4-209ENST00000521621 VDAC1P21796 283 aa7.43□□□□□ -1.22
CLK4-209ENST00000521621 AADACP22760 399 aa7.43□□□□□ -1.22
CLK4-209ENST00000521621 FCGR2CP31995 323 aa7.43□□□□□ -1.22
CLK4-209ENST00000521621 ECI1P42126 302 aa7.43□□□□□ -1.22
CLK4-209ENST00000521621 CDX1P47902 265 aaPredicted RBP7.43□□□□□ -1.22
CLK4-209ENST00000521621 RPL23AP62750 156 aaKnown RBP7.43□□□□□ -1.22
CLK4-209ENST00000521621 PUSL1Q8N0Z8 303 aaKnown RBP7.43□□□□□ -1.22
CLK4-209ENST00000521621 OR5H2Q8NGV7 314 aa7.43□□□□□ -1.22
CLK4-209ENST00000521621 VSTM2AQ8TAG5 236 aa7.43□□□□□ -1.22
CLK4-209ENST00000521621 TENM1Q9UKZ4 2725 aa7.43□□□□□ -1.22
CLK4-209ENST00000521621 LINC00473A8K010 186 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 B3GALNT1O75752 331 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 EGR2P11161 476 aaPredicted RBP7.42□□□□□ -1.22
CLK4-209ENST00000521621 RND3P61587 244 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 TMEM267Q0VDI3 215 aaPredicted RBP7.42□□□□□ -1.22
CLK4-209ENST00000521621 HNF4GQ14541 408 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 MRGPRG-AS1Q2M3A8 158 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 VMA21Q3ZAQ7 101 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 LHFPL1Q86WI0 220 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 MFSD4AQ8N468 514 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 OR4S2Q8NH73 311 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 CITED2Q99967 270 aaPredicted RBP7.42□□□□□ -1.22
CLK4-209ENST00000521621 SRSF8Q9BRL6 282 aaKnown RBP7.42□□□□□ -1.22
CLK4-209ENST00000521621 RSRP1Q9BUV0 290 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 TAS2R8Q9NYW2 309 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 COMMD9Q9P000 198 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 EXTL2Q9UBQ6 330 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 IGKV1-16P04430 117 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 NFYAP23511 347 aaPredicted RBP7.42□□□□□ -1.22
CLK4-209ENST00000521621 MYCNOSP40205 109 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 TAS2R31P59538 309 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 SRSF4Q08170 494 aaKnown RBP7.42□□□□□ -1.22
CLK4-209ENST00000521621 CATR1Q13166 79 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 PPP1R27Q86WC6 154 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 SMIM4Q8WVI0 70 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 UBE2E2Q96LR5 201 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 METTL1Q9UBP6 276 aaKnown RBP7.42□□□□□ -1.22
CLK4-209ENST00000521621 TRAV41A0A0B4J266 112 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 TCRBV4S1A1TA0A5B7 111 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 H7C2Y5 167 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 WIPF1O43516 503 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 DUS4LO95620 317 aaKnown RBP7.42□□□□□ -1.22
CLK4-209ENST00000521621 CNTFRP26992 372 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 CX3CL1P78423 397 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 TMEM95Q3KNT9 176 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 THOC7Q6I9Y2 204 aaKnown RBP7.42□□□□□ -1.22
CLK4-209ENST00000521621 GLDNQ6ZMI3 551 aaPredicted RBP7.42□□□□□ -1.22
CLK4-209ENST00000521621 KCTD9Q7L273 389 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 TMEM167AQ8TBQ9 72 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 FCAMRQ8WWV6 532 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 GPR61Q9BZJ8 451 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 PLEKHA2Q9HB19 425 aa7.42□□□□□ -1.22
CLK4-209ENST00000521621 FAM25AB3EWG3 89 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 FAM25CB3EWG5 89 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 FAM25GB3EWG6 89 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 BRWD1-AS2P59051 145 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 RPS16P62249 146 aaKnown RBP7.41□□□□□ -1.22
CLK4-209ENST00000521621 KIAA0141Q14154 515 aaPredicted RBP7.41□□□□□ -1.22
CLK4-209ENST00000521621 SURF2Q15527 256 aaPredicted RBP7.41□□□□□ -1.22
CLK4-209ENST00000521621 CXorf66Q5JRM2 361 aaPredicted RBP7.41□□□□□ -1.22
CLK4-209ENST00000521621 FAM209BQ5JX69 171 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 LINC00299Q6ZSB3 139 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 OR6F1Q8NGZ6 308 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 C4orf3Q8WVX3 66 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 ABHD1Q96SE0 405 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 FXYD6Q9H0Q3 95 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 SLA2Q9H6Q3 261 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 BET1LQ9NYM9 111 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 EHFQ9NZC4 300 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 RBM7Q9Y580 266 aaKnown RBP7.41□□□□□ -1.22
CLK4-209ENST00000521621 TSPAN15O95858 294 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 HPRT1P00492 218 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 HRASP01112 189 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 GNRHRP30968 328 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 ETV6P41212 452 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 TAS2R19P59542 299 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 HERV-K104P61576 105 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 SSBP2P81877 361 aaPredicted RBP7.41□□□□□ -1.22
CLK4-209ENST00000521621 MEF2DQ14814 521 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 PRSS8Q16651 343 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 TMEM17Q86X19 198 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 SLC38A6Q8IZM9 456 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 HARBI1Q96MB7 349 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 SLC5A7Q9GZV3 580 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 SLC2A8Q9NY64 477 aa7.41□□□□□ -1.22
CLK4-209ENST00000521621 FOXA2Q9Y261 457 aaPredicted RBP7.41□□□□□ -1.22
CLK4-209ENST00000521621 LINC01548A6NM66 108 aa7.4□□□□□ -1.22
CLK4-209ENST00000521621 GPR31O00270 319 aa7.4□□□□□ -1.22
CLK4-209ENST00000521621 ATP6V0E1O15342 81 aa7.4□□□□□ -1.22
CLK4-209ENST00000521621 RPL30P62888 115 aaKnown RBP7.4□□□□□ -1.22
CLK4-209ENST00000521621 FHL3Q13643 280 aa7.4□□□□□ -1.22
CLK4-209ENST00000521621 C9orf152Q5JTZ5 239 aa7.4□□□□□ -1.22
CLK4-209ENST00000521621 MMD2Q8IY49 270 aa7.4□□□□□ -1.22
CLK4-209ENST00000521621 FBXL15Q9H469 300 aa7.4□□□□□ -1.22
CLK4-209ENST00000521621 CCL28Q9NRJ3 127 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms