RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 LINC00322Q6ZN03 302 aaPredicted RBP11.29□□□□□ -0.6
PRKDC-204ENST00000521331 ADAD2Q8NCV1 583 aaKnown RBP11.29□□□□□ -0.6
PRKDC-204ENST00000521331 OR56B1Q8NGI3 324 aa11.29□□□□□ -0.6
PRKDC-204ENST00000521331 PECRQ9BY49 303 aa11.29□□□□□ -0.6
PRKDC-204ENST00000521331 OR2D2Q9H210 308 aa11.29□□□□□ -0.6
PRKDC-204ENST00000521331 HIPK2Q9H2X6 1198 aa11.29□□□□□ -0.6
PRKDC-204ENST00000521331 SDHAF2Q9NX18 166 aa11.29□□□□□ -0.6
PRKDC-204ENST00000521331 ADAM30Q9UKF2 790 aa11.29□□□□□ -0.6
PRKDC-204ENST00000521331 MSGN1A6NI15 193 aa11.28□□□□□ -0.6
PRKDC-204ENST00000521331 FAM223BA6NKX1 122 aa11.28□□□□□ -0.6
PRKDC-204ENST00000521331 FABP7O15540 132 aa11.28□□□□□ -0.6
PRKDC-204ENST00000521331 OR9G9P0C7N8 305 aa11.28□□□□□ -0.6
PRKDC-204ENST00000521331 CD81P60033 236 aa11.28□□□□□ -0.6
PRKDC-204ENST00000521331 VMA21Q3ZAQ7 101 aa11.28□□□□□ -0.6
PRKDC-204ENST00000521331 FAM223AQ8IWN6 122 aa11.28□□□□□ -0.6
PRKDC-204ENST00000521331 TEX45Q8NA69 505 aa11.28□□□□□ -0.6
PRKDC-204ENST00000521331 OR10J5Q8NHC4 309 aa11.28□□□□□ -0.6
PRKDC-204ENST00000521331 UFD1Q92890 307 aa11.28□□□□□ -0.6
PRKDC-204ENST00000521331 CABLES2Q9BTV7 478 aa11.28□□□□□ -0.6
PRKDC-204ENST00000521331 PLEKHA3Q9HB20 300 aa11.28□□□□□ -0.6
PRKDC-204ENST00000521331 RETNQ9HD89 108 aa11.28□□□□□ -0.6
PRKDC-204ENST00000521331 SLC2A8Q9NY64 477 aa11.28□□□□□ -0.6
PRKDC-204ENST00000521331 LSM2Q9Y333 95 aaKnown RBP11.28□□□□□ -0.6
PRKDC-204ENST00000521331 SRRM4A7MD48 611 aaKnown RBP11.27□□□□□ -0.61
PRKDC-204ENST00000521331 BET1O15155 118 aa11.27□□□□□ -0.61
PRKDC-204ENST00000521331 ARL6IP5O75915 188 aa11.27□□□□□ -0.61
PRKDC-204ENST00000521331 CD3GP09693 182 aa11.27□□□□□ -0.61
PRKDC-204ENST00000521331 UBE2KP61086 200 aa11.27□□□□□ -0.61
PRKDC-204ENST00000521331 RHOGP84095 191 aa11.27□□□□□ -0.61
PRKDC-204ENST00000521331 TPBGQ13641 420 aa11.27□□□□□ -0.61
PRKDC-204ENST00000521331 MED22Q15528 200 aa11.27□□□□□ -0.61
PRKDC-204ENST00000521331 PRSS8Q16651 343 aa11.27□□□□□ -0.61
PRKDC-204ENST00000521331 PLAC9Q5JTB6 97 aa11.27□□□□□ -0.61
PRKDC-204ENST00000521331 FAM209BQ5JX69 171 aa11.27□□□□□ -0.61
PRKDC-204ENST00000521331 ADTRPQ96IZ2 230 aa11.27□□□□□ -0.61
PRKDC-204ENST00000521331 GFI1Q99684 422 aa11.27□□□□□ -0.61
PRKDC-204ENST00000521331 NEURL2Q9BR09 285 aa11.27□□□□□ -0.61
PRKDC-204ENST00000521331 TRBV6-7A0A0A0MS04 114 aa11.26□□□□□ -0.61
PRKDC-204ENST00000521331 BMPR1BO00238 502 aa11.26□□□□□ -0.61
PRKDC-204ENST00000521331 MPPED1O15442 326 aa11.26□□□□□ -0.61
PRKDC-204ENST00000521331 CREBL2O60519 120 aaPredicted RBP11.26□□□□□ -0.61
PRKDC-204ENST00000521331 RBMXL2O75526 392 aaKnown RBP11.26□□□□□ -0.61
PRKDC-204ENST00000521331 TUSC2O75896 110 aa11.26□□□□□ -0.61
PRKDC-204ENST00000521331 APELAP0DMC3 54 aa11.26□□□□□ -0.61
PRKDC-204ENST00000521331 ATP5G2Q06055 141 aa11.26□□□□□ -0.61
PRKDC-204ENST00000521331 EXOSC2Q13868 293 aaKnown RBP11.26□□□□□ -0.61
PRKDC-204ENST00000521331 TRAM1Q15629 374 aa11.26□□□□□ -0.61
PRKDC-204ENST00000521331 TNXAQ16473 311 aa11.26□□□□□ -0.61
PRKDC-204ENST00000521331 MRGPRG-AS1Q2M3A8 158 aa11.26□□□□□ -0.61
PRKDC-204ENST00000521331 CD300EQ496F6 205 aaPredicted RBP11.26□□□□□ -0.61
PRKDC-204ENST00000521331 IGSF11Q5DX21 431 aa11.26□□□□□ -0.61
PRKDC-204ENST00000521331 LIPKQ5VXJ0 399 aa11.26□□□□□ -0.61
PRKDC-204ENST00000521331 DYNLRB2Q8TF09 96 aa11.26□□□□□ -0.61
PRKDC-204ENST00000521331 SRSF12Q8WXF0 261 aaKnown RBP11.26□□□□□ -0.61
PRKDC-204ENST00000521331 TMEM203Q969S6 136 aa11.26□□□□□ -0.61
PRKDC-204ENST00000521331 FAM3DQ96BQ1 224 aa11.26□□□□□ -0.61
PRKDC-204ENST00000521331 FAM110AQ9BQ89 295 aa11.26□□□□□ -0.61
PRKDC-204ENST00000521331 CENPOQ9BU64 300 aa11.26□□□□□ -0.61
PRKDC-204ENST00000521331 AKIP1Q9NQ31 210 aa11.26□□□□□ -0.61
PRKDC-204ENST00000521331 ZNF230Q9UIE0 474 aaPredicted RBP11.26□□□□□ -0.61
PRKDC-204ENST00000521331 AK6Q9Y3D8 172 aaKnown RBP11.26□□□□□ -0.61
PRKDC-204ENST00000521331 RBM7Q9Y580 266 aaKnown RBP11.26□□□□□ -0.61
PRKDC-204ENST00000521331 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.25□□□□□ -0.61
PRKDC-204ENST00000521331 TRBV9A0A0B4J1U6 114 aa11.25□□□□□ -0.61
PRKDC-204ENST00000521331 PTGES3LE9PB15 166 aa11.25□□□□□ -0.61
PRKDC-204ENST00000521331 CASQ2O14958 399 aaPredicted RBP11.25□□□□□ -0.61
PRKDC-204ENST00000521331 DENRO43583 198 aaKnown RBP11.25□□□□□ -0.61
PRKDC-204ENST00000521331 ACTL6BO94805 426 aa11.25□□□□□ -0.61
PRKDC-204ENST00000521331 FCGR3AP08637 254 aa11.25□□□□□ -0.61
PRKDC-204ENST00000521331 PSMA1P25786 263 aaKnown RBP11.25□□□□□ -0.61
PRKDC-204ENST00000521331 C2orf76Q3KRA6 126 aa11.25□□□□□ -0.61
PRKDC-204ENST00000521331 TMEM91Q6ZNR0 172 aa11.25□□□□□ -0.61
PRKDC-204ENST00000521331 OSR1Q8TAX0 266 aaPredicted RBP11.25□□□□□ -0.61
PRKDC-204ENST00000521331 KCTD12Q96CX2 325 aaKnown RBP11.25□□□□□ -0.61
PRKDC-204ENST00000521331 RAB3CQ96E17 227 aa11.25□□□□□ -0.61
PRKDC-204ENST00000521331 C5orf30Q96GV9 206 aa11.25□□□□□ -0.61
PRKDC-204ENST00000521331 SPIN2AQ99865 258 aa11.25□□□□□ -0.61
PRKDC-204ENST00000521331 SPIN2BQ9BPZ2 258 aa11.25□□□□□ -0.61
PRKDC-204ENST00000521331 ZNF785A8K8V0 405 aa11.24□□□□□ -0.61
PRKDC-204ENST00000521331 CRYZL1O95825 349 aa11.24□□□□□ -0.61
PRKDC-204ENST00000521331 GSTT2P0CG29 244 aa11.24□□□□□ -0.61
PRKDC-204ENST00000521331 GSTT2BP0CG30 244 aa11.24□□□□□ -0.61
PRKDC-204ENST00000521331 DUTP33316 252 aaKnown RBP11.24□□□□□ -0.61
PRKDC-204ENST00000521331 PSMD7P51665 324 aa11.24□□□□□ -0.61
PRKDC-204ENST00000521331 CLDN12P56749 244 aa11.24□□□□□ -0.61
PRKDC-204ENST00000521331 DEFB114Q30KQ6 69 aa11.24□□□□□ -0.61
PRKDC-204ENST00000521331 DEFB125Q8N687 156 aa11.24□□□□□ -0.61
PRKDC-204ENST00000521331 NECAP1Q8NC96 275 aa11.24□□□□□ -0.61
PRKDC-204ENST00000521331 ACOT12Q8WYK0 555 aa11.24□□□□□ -0.61
PRKDC-204ENST00000521331 DDB2Q92466 427 aa11.24□□□□□ -0.61
PRKDC-204ENST00000521331 TSC22D3Q99576 134 aa11.24□□□□□ -0.61
PRKDC-204ENST00000521331 GINS4Q9BRT9 223 aa11.24□□□□□ -0.61
PRKDC-204ENST00000521331 SRD5A3Q9H8P0 318 aa11.24□□□□□ -0.61
PRKDC-204ENST00000521331 SCN3BQ9NY72 215 aa11.24□□□□□ -0.61
PRKDC-204ENST00000521331 TECRQ9NZ01 308 aaKnown RBP11.24□□□□□ -0.61
PRKDC-204ENST00000521331 RAB22AQ9UL26 194 aa11.24□□□□□ -0.61
PRKDC-204ENST00000521331 RBMY1BA6NDE4 496 aaKnown RBP11.23□□□□□ -0.61
PRKDC-204ENST00000521331 RBMY1EA6NEQ0 496 aaKnown RBP11.23□□□□□ -0.61
PRKDC-204ENST00000521331 OR11H12B2RN74 326 aa11.23□□□□□ -0.61
PRKDC-204ENST00000521331 PRH1P02810 166 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms