RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 IGLV1-40P01703 118 aa16.13■□□□□ 0.17
TRIM35-203ENST00000521253 CRYGBP07316 175 aa16.13■□□□□ 0.17
TRIM35-203ENST00000521253 CD33P20138 364 aa16.13■□□□□ 0.17
TRIM35-203ENST00000521253 CDX1P47902 265 aaPredicted RBP16.13■□□□□ 0.17
TRIM35-203ENST00000521253 RPL30P62888 115 aaKnown RBP16.13■□□□□ 0.17
TRIM35-203ENST00000521253 CDK10Q15131 360 aa16.13■□□□□ 0.17
TRIM35-203ENST00000521253 OXLD1Q5BKU9 147 aa16.13■□□□□ 0.17
TRIM35-203ENST00000521253 MZT2AQ6P582 158 aa16.13■□□□□ 0.17
TRIM35-203ENST00000521253 KCTD9Q7L273 389 aa16.13■□□□□ 0.17
TRIM35-203ENST00000521253 PPP1R27Q86WC6 154 aa16.13■□□□□ 0.17
TRIM35-203ENST00000521253 CLVS1Q8IUQ0 354 aaPredicted RBP16.13■□□□□ 0.17
TRIM35-203ENST00000521253 FAM103A1Q9BTL3 118 aaKnown RBP16.13■□□□□ 0.17
TRIM35-203ENST00000521253 KLK15Q9H2R5 256 aa16.13■□□□□ 0.17
TRIM35-203ENST00000521253 FCGR3BO75015 233 aa16.12■□□□□ 0.17
TRIM35-203ENST00000521253 SSBP2P81877 361 aaPredicted RBP16.12■□□□□ 0.17
TRIM35-203ENST00000521253 PJVKQ0ZLH3 352 aa16.12■□□□□ 0.17
TRIM35-203ENST00000521253 EIF4EBP1Q13541 118 aaPredicted RBP16.12■□□□□ 0.17
TRIM35-203ENST00000521253 SPCS2Q15005 226 aa16.12■□□□□ 0.17
TRIM35-203ENST00000521253 OVCH2Q7RTZ1 564 aa16.12■□□□□ 0.17
TRIM35-203ENST00000521253 LINC00482Q8N8I6 264 aa16.12■□□□□ 0.17
TRIM35-203ENST00000521253 MYOZ3Q8TDC0 251 aa16.12■□□□□ 0.17
TRIM35-203ENST00000521253 SECTM1Q8WVN6 248 aa16.12■□□□□ 0.17
TRIM35-203ENST00000521253 NUBP2Q9Y5Y2 271 aa16.12■□□□□ 0.17
TRIM35-203ENST00000521253 WIPF1O43516 503 aa16.11■□□□□ 0.17
TRIM35-203ENST00000521253 SOX15O60248 233 aa16.11■□□□□ 0.17
TRIM35-203ENST00000521253 NAT1P18440 290 aa16.11■□□□□ 0.17
TRIM35-203ENST00000521253 FXYD3Q14802 87 aa16.11■□□□□ 0.17
TRIM35-203ENST00000521253 BEAN1Q3B7T3 259 aa16.11■□□□□ 0.17
TRIM35-203ENST00000521253 OR2B11Q5JQS5 317 aa16.11■□□□□ 0.17
TRIM35-203ENST00000521253 TMEM65Q6PI78 240 aa16.11■□□□□ 0.17
TRIM35-203ENST00000521253 SNX29P2Q8IUI4 249 aa16.11■□□□□ 0.17
TRIM35-203ENST00000521253 MRPL41Q8IXM3 137 aaKnown RBP16.11■□□□□ 0.17
TRIM35-203ENST00000521253 GPX8Q8TED1 209 aa16.11■□□□□ 0.17
TRIM35-203ENST00000521253 GIMAP1Q8WWP7 306 aa16.11■□□□□ 0.17
TRIM35-203ENST00000521253 ARPC1AQ92747 370 aa16.11■□□□□ 0.17
TRIM35-203ENST00000521253 DUX3Q96PT4 197 aa16.11■□□□□ 0.17
TRIM35-203ENST00000521253 HSD17B10Q99714 261 aaKnown RBP16.11■□□□□ 0.17
TRIM35-203ENST00000521253 CCL28Q9NRJ3 127 aa16.11■□□□□ 0.17
TRIM35-203ENST00000521253 TAS2R8Q9NYW2 309 aa16.11■□□□□ 0.17
TRIM35-203ENST00000521253 EHFQ9NZC4 300 aa16.11■□□□□ 0.17
TRIM35-203ENST00000521253 FOXA2Q9Y261 457 aaPredicted RBP16.11■□□□□ 0.17
TRIM35-203ENST00000521253 PRELID3BQ9Y3B1 194 aa16.11■□□□□ 0.17
TRIM35-203ENST00000521253 A0A1W2PN81 502 aa16.1■□□□□ 0.17
TRIM35-203ENST00000521253 FAM25AB3EWG3 89 aa16.1■□□□□ 0.17
TRIM35-203ENST00000521253 FAM25CB3EWG5 89 aa16.1■□□□□ 0.17
TRIM35-203ENST00000521253 FAM25GB3EWG6 89 aa16.1■□□□□ 0.17
TRIM35-203ENST00000521253 ARPC1BO15143 372 aaKnown RBP16.1■□□□□ 0.17
TRIM35-203ENST00000521253 IGLL1P15814 213 aa16.1■□□□□ 0.17
TRIM35-203ENST00000521253 CHRNA7P36544 502 aa16.1■□□□□ 0.17
TRIM35-203ENST00000521253 MYCNOSP40205 109 aa16.1■□□□□ 0.17
TRIM35-203ENST00000521253 RPL5P46777 297 aaKnown RBP16.1■□□□□ 0.17
TRIM35-203ENST00000521253 RFX2P48378 723 aa16.1■□□□□ 0.17
TRIM35-203ENST00000521253 FXYD4P59646 89 aa16.1■□□□□ 0.17
TRIM35-203ENST00000521253 UBE2KP61086 200 aa16.1■□□□□ 0.17
TRIM35-203ENST00000521253 GNB1P62873 340 aa16.1■□□□□ 0.17
TRIM35-203ENST00000521253 TMEM267Q0VDI3 215 aaPredicted RBP16.1■□□□□ 0.17
TRIM35-203ENST00000521253 KIAA0141Q14154 515 aaPredicted RBP16.1■□□□□ 0.17
TRIM35-203ENST00000521253 DEFB136Q30KP8 78 aa16.1■□□□□ 0.17
TRIM35-203ENST00000521253 KPRPQ5T749 579 aaPredicted RBP16.1■□□□□ 0.17
TRIM35-203ENST00000521253 TCTEX1D1Q8N7M0 179 aa16.1■□□□□ 0.17
TRIM35-203ENST00000521253 LFNGQ8NES3 379 aa16.1■□□□□ 0.17
TRIM35-203ENST00000521253 GRPEL2Q8TAA5 225 aa16.1■□□□□ 0.17
TRIM35-203ENST00000521253 OSR1Q8TAX0 266 aaPredicted RBP16.1■□□□□ 0.17
TRIM35-203ENST00000521253 RAB2BQ8WUD1 216 aa16.1■□□□□ 0.17
TRIM35-203ENST00000521253 TCTEX1D2Q8WW35 142 aa16.1■□□□□ 0.17
TRIM35-203ENST00000521253 RAX2Q96IS3 184 aa16.1■□□□□ 0.17
TRIM35-203ENST00000521253 GPHA2Q96T91 129 aa16.1■□□□□ 0.17
TRIM35-203ENST00000521253 TNFSF12O43508 249 aa16.09■□□□□ 0.17
TRIM35-203ENST00000521253 PMP2P02689 132 aa16.09■□□□□ 0.17
TRIM35-203ENST00000521253 RAB9AP51151 201 aa16.09■□□□□ 0.17
TRIM35-203ENST00000521253 TAS2R46P59540 309 aa16.09■□□□□ 0.17
TRIM35-203ENST00000521253 DYRK1AQ13627 763 aa16.09■□□□□ 0.17
TRIM35-203ENST00000521253 MSMO1Q15800 293 aa16.09■□□□□ 0.17
TRIM35-203ENST00000521253 MRGPRG-AS1Q2M3A8 158 aa16.09■□□□□ 0.17
TRIM35-203ENST00000521253 VMA21Q3ZAQ7 101 aa16.09■□□□□ 0.17
TRIM35-203ENST00000521253 AKIRIN2Q53H80 203 aa16.09■□□□□ 0.17
TRIM35-203ENST00000521253 UNQ5815/PRO19632Q6UWF5 114 aa16.09■□□□□ 0.17
TRIM35-203ENST00000521253 ZNF66Q6ZN08 573 aa16.09■□□□□ 0.17
TRIM35-203ENST00000521253 MFSD4AQ8N468 514 aa16.09■□□□□ 0.17
TRIM35-203ENST00000521253 TEX45Q8NA69 505 aa16.09■□□□□ 0.17
TRIM35-203ENST00000521253 P2RX4Q99571 388 aa16.09■□□□□ 0.17
TRIM35-203ENST00000521253 DCUN1D5Q9BTE7 237 aa16.09■□□□□ 0.17
TRIM35-203ENST00000521253 SLC5A7Q9GZV3 580 aa16.09■□□□□ 0.17
TRIM35-203ENST00000521253 SCPEP1Q9HB40 452 aa16.09■□□□□ 0.17
TRIM35-203ENST00000521253 DNAH3Q8TD57 4116 aa16.09■□□□□ 0.17
TRIM35-203ENST00000521253 CCL24O00175 119 aa16.08■□□□□ 0.16
TRIM35-203ENST00000521253 CNIH1O95406 144 aa16.08■□□□□ 0.16
TRIM35-203ENST00000521253 HLA-DMAP28067 261 aa16.08■□□□□ 0.16
TRIM35-203ENST00000521253 TMBIM6P55061 237 aa16.08■□□□□ 0.16
TRIM35-203ENST00000521253 BRWD1-AS2P59051 145 aa16.08■□□□□ 0.16
TRIM35-203ENST00000521253 ACTBL2Q562R1 376 aa16.08■□□□□ 0.16
TRIM35-203ENST00000521253 DHRS11Q6UWP2 260 aa16.08■□□□□ 0.16
TRIM35-203ENST00000521253 IDO2Q6ZQW0 420 aa16.08■□□□□ 0.16
TRIM35-203ENST00000521253 TMEM17Q86X19 198 aa16.08■□□□□ 0.16
TRIM35-203ENST00000521253 LYSMD2Q8IV50 215 aa16.08■□□□□ 0.16
TRIM35-203ENST00000521253 ZNF491Q8N8L2 437 aa16.08■□□□□ 0.16
TRIM35-203ENST00000521253 OR5H2Q8NGV7 314 aa16.08■□□□□ 0.16
TRIM35-203ENST00000521253 CASTOR1Q8WTX7 329 aa16.08■□□□□ 0.16
TRIM35-203ENST00000521253 C4orf3Q8WVX3 66 aa16.08■□□□□ 0.16
TRIM35-203ENST00000521253 UBE2E2Q96LR5 201 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms