RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 NCOR1P1Q9H4R4 102 aa21.29■■□□□ 1
COL13A1-213ENST00000520267 GNG13Q9P2W3 67 aa21.29■■□□□ 1
COL13A1-213ENST00000520267 LOC102723971A0A1B0GUV8 181 aa21.28■■□□□ 1
COL13A1-213ENST00000520267 TNFSF4P23510 183 aa21.28■■□□□ 1
COL13A1-213ENST00000520267 FGF8P55075 233 aaPredicted RBP21.28■■□□□ 1
COL13A1-213ENST00000520267 ZNF787Q6DD87 383 aa21.28■■□□□ 1
COL13A1-213ENST00000520267 SSX9Q7RTT3 188 aa21.28■■□□□ 1
COL13A1-213ENST00000520267 CYB561D1Q8N8Q1 229 aa21.28■■□□□ 1
COL13A1-213ENST00000520267 HIST1H2BAQ96A08 127 aa21.28■■□□□ 1
COL13A1-213ENST00000520267 CIB3Q96Q77 187 aaPredicted RBP21.28■■□□□ 1
COL13A1-213ENST00000520267 ELOVL5Q9NYP7 299 aa21.28■■□□□ 1
COL13A1-213ENST00000520267 A0A1W2PPE3 182 aa21.27■■□□□ 1
COL13A1-213ENST00000520267 DPRXA6NFQ7 191 aa21.27■■□□□ 1
COL13A1-213ENST00000520267 GYPAP02724 150 aa21.27■■□□□ 1
COL13A1-213ENST00000520267 PLA2G5P39877 138 aa21.27■■□□□ 1
COL13A1-213ENST00000520267 ATP6V1FQ16864 119 aa21.27■■□□□ 1
COL13A1-213ENST00000520267 CCL13Q99616 98 aa21.27■■□□□ 1
COL13A1-213ENST00000520267 TMEM147Q9BVK8 224 aa21.27■■□□□ 1
COL13A1-213ENST00000520267 SAV1Q9H4B6 383 aaPredicted RBP21.27■■□□□ 1
COL13A1-213ENST00000520267 APC2O95996 2303 aa21.27■■□□□ 1
COL13A1-213ENST00000520267 TBR1Q16650 682 aa21.27■■□□□ 1
COL13A1-213ENST00000520267 KHDC3LQ587J8 217 aa21.27■■□□□ 1
COL13A1-213ENST00000520267 OR10P1Q8NGE3 313 aa21.27■■□□□ 1
COL13A1-213ENST00000520267 EGLN1Q9GZT9 426 aa21.27■■□□□ 1
COL13A1-213ENST00000520267 ZNF665Q9H7R5 613 aa21.27■■□□□ 1
COL13A1-213ENST00000520267 TUBA4BQ9H853 241 aa21.27■■□□□ 1
COL13A1-213ENST00000520267 KBTBD11-OT1A0A1B0GTJ5 212 aa21.26■□□□□ 0.99
COL13A1-213ENST00000520267 CT45A1Q5HYN5 189 aa21.26■□□□□ 0.99
COL13A1-213ENST00000520267 TCF23Q7RTU1 214 aa21.26■□□□□ 0.99
COL13A1-213ENST00000520267 FAM216BQ8N7L0 139 aa21.26■□□□□ 0.99
COL13A1-213ENST00000520267 CT45A3Q8NHU0 189 aa21.26■□□□□ 0.99
COL13A1-213ENST00000520267 UNKLQ9H9P5 680 aaKnown RBP21.26■□□□□ 0.99
COL13A1-213ENST00000520267 GFOD1Q9NXC2 390 aa21.26■□□□□ 0.99
COL13A1-213ENST00000520267 TIMM9Q9Y5J7 89 aa21.26■□□□□ 0.99
COL13A1-213ENST00000520267 SPTBN2O15020 2390 aa21.26■□□□□ 0.99
COL13A1-213ENST00000520267 H3BQ15 152 aa21.26■□□□□ 0.99
COL13A1-213ENST00000520267 EIF3GO75821 320 aaKnown RBP eCLIP21.26■□□□□ 0.99
COL13A1-213ENST00000520267 IGKV1D-33P01593 117 aa21.26■□□□□ 0.99
COL13A1-213ENST00000520267 IGKV1-33P01594 117 aa21.26■□□□□ 0.99
COL13A1-213ENST00000520267 ARG1P05089 322 aa21.26■□□□□ 0.99
COL13A1-213ENST00000520267 THBDP07204 575 aa21.26■□□□□ 0.99
COL13A1-213ENST00000520267 PTAFRP25105 342 aa21.26■□□□□ 0.99
COL13A1-213ENST00000520267 VKORC1L1Q8N0U8 176 aa21.26■□□□□ 0.99
COL13A1-213ENST00000520267 PINX1Q96BK5 328 aaKnown RBP21.26■□□□□ 0.99
COL13A1-213ENST00000520267 PTPRZ1P23471 2315 aaPredicted RBP21.25■□□□□ 0.99
COL13A1-213ENST00000520267 A0A1W2PPE2 198 aa21.25■□□□□ 0.99
COL13A1-213ENST00000520267 A0A1W2PPH5 198 aa21.25■□□□□ 0.99
COL13A1-213ENST00000520267 RAB13P51153 203 aa21.25■□□□□ 0.99
COL13A1-213ENST00000520267 PRR30Q53SZ7 412 aaPredicted RBP21.25■□□□□ 0.99
COL13A1-213ENST00000520267 PRAMEF5Q5TYX0 476 aa21.25■□□□□ 0.99
COL13A1-213ENST00000520267 CENPVQ7Z7K6 275 aaPredicted RBP21.25■□□□□ 0.99
COL13A1-213ENST00000520267 ZFP82Q8N141 532 aa21.25■□□□□ 0.99
COL13A1-213ENST00000520267 ZFP92A6NM28 416 aa21.25■□□□□ 0.99
COL13A1-213ENST00000520267 CCL8P80075 99 aa21.25■□□□□ 0.99
COL13A1-213ENST00000520267 ZNF788Q6ZQV5 615 aa21.25■□□□□ 0.99
COL13A1-213ENST00000520267 S1PR3Q99500 378 aa21.25■□□□□ 0.99
COL13A1-213ENST00000520267 DMXL2Q8TDJ6 3036 aa21.24■□□□□ 0.99
COL13A1-213ENST00000520267 FOLR2P14207 255 aa21.24■□□□□ 0.99
COL13A1-213ENST00000520267 ADIPOQQ15848 244 aa21.24■□□□□ 0.99
COL13A1-213ENST00000520267 ACSM6Q6P461 480 aa21.24■□□□□ 0.99
COL13A1-213ENST00000520267 SCNM1Q9BWG6 230 aa21.24■□□□□ 0.99
COL13A1-213ENST00000520267 ZNF835Q9Y2P0 537 aa21.24■□□□□ 0.99
COL13A1-213ENST00000520267 MAP1BP46821 2468 aaKnown RBP21.24■□□□□ 0.99
COL13A1-213ENST00000520267 TRGV10A0A0A0MS01 117 aa21.24■□□□□ 0.99
COL13A1-213ENST00000520267 IFNA17P01571 189 aa21.24■□□□□ 0.99
COL13A1-213ENST00000520267 FGF7P21781 194 aa21.24■□□□□ 0.99
COL13A1-213ENST00000520267 BSPH1Q075Z2 132 aa21.24■□□□□ 0.99
COL13A1-213ENST00000520267 TFF3Q07654 80 aa21.24■□□□□ 0.99
COL13A1-213ENST00000520267 ZNF429Q86V71 674 aa21.24■□□□□ 0.99
COL13A1-213ENST00000520267 DDB2Q92466 427 aa21.24■□□□□ 0.99
COL13A1-213ENST00000520267 SNRNP40Q96DI7 357 aaKnown RBP21.24■□□□□ 0.99
COL13A1-213ENST00000520267 JKAMPQ9P055 326 aa21.24■□□□□ 0.99
COL13A1-213ENST00000520267 C15orf62A8K5M9 175 aa21.23■□□□□ 0.99
COL13A1-213ENST00000520267 ITGB1BP1O14713 200 aa21.23■□□□□ 0.99
COL13A1-213ENST00000520267 ATXN7O15265 892 aaPredicted RBP21.23■□□□□ 0.99
COL13A1-213ENST00000520267 RBFOX2O43251 390 aaKnown RBP eCLIP21.23■□□□□ 0.99
COL13A1-213ENST00000520267 OR4A8P0C604 315 aa21.23■□□□□ 0.99
COL13A1-213ENST00000520267 RAB7AP51149 207 aa21.23■□□□□ 0.99
COL13A1-213ENST00000520267 CTAG1AP78358 180 aa21.23■□□□□ 0.99
COL13A1-213ENST00000520267 AARDQ4LEZ3 155 aa21.23■□□□□ 0.99
COL13A1-213ENST00000520267 ZCCHC24Q8N2G6 241 aaKnown RBP21.23■□□□□ 0.99
COL13A1-213ENST00000520267 RPP25LQ8N5L8 163 aaKnown RBP21.23■□□□□ 0.99
COL13A1-213ENST00000520267 C2CD4CQ8TF44 421 aa21.23■□□□□ 0.99
COL13A1-213ENST00000520267 RAB39BQ96DA2 213 aa21.23■□□□□ 0.99
COL13A1-213ENST00000520267 GAB2Q9UQC2 676 aa21.23■□□□□ 0.99
COL13A1-213ENST00000520267 TET2Q6N021 2002 aaPredicted RBP21.23■□□□□ 0.99
COL13A1-213ENST00000520267 BCL2P10415 239 aa21.22■□□□□ 0.99
COL13A1-213ENST00000520267 IRF2P14316 349 aa21.22■□□□□ 0.99
COL13A1-213ENST00000520267 CISD1Q9NZ45 108 aaKnown RBP21.22■□□□□ 0.99
COL13A1-213ENST00000520267 DCHS1Q96JQ0 3298 aa21.22■□□□□ 0.99
COL13A1-213ENST00000520267 TRAV3A0A0B4J244 114 aa21.22■□□□□ 0.99
COL13A1-213ENST00000520267 MAP1LC3B2A6NCE7 125 aa21.22■□□□□ 0.99
COL13A1-213ENST00000520267 FAM90A9PA6NNJ1 464 aa21.22■□□□□ 0.99
COL13A1-213ENST00000520267 GNB2P62879 340 aa21.22■□□□□ 0.99
COL13A1-213ENST00000520267 VWC2Q2TAL6 325 aa21.22■□□□□ 0.99
COL13A1-213ENST00000520267 TEX36Q5VZQ5 186 aa21.22■□□□□ 0.99
COL13A1-213ENST00000520267 OR4A16Q8NH70 328 aa21.22■□□□□ 0.99
COL13A1-213ENST00000520267 MAP1LC3BQ9GZQ8 125 aa21.22■□□□□ 0.99
COL13A1-213ENST00000520267 RAB9BQ9NP90 201 aa21.22■□□□□ 0.99
COL13A1-213ENST00000520267 SAA2-SAA4A0A096LPE2 208 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms