RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 IGHV1-8P0DP01 117 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 AADACP22760 399 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 CALRP27797 417 aaKnown RBP5.43□□□□□ -1.54
SDCBP-208ENST00000520228 KCNJ3P48549 501 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 FABP5Q01469 135 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 DYNC1I2Q13409 638 aaKnown RBP5.43□□□□□ -1.54
SDCBP-208ENST00000520228 SSX1Q16384 188 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 TAF9Q16594 264 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 MPV17LQ2QL34 196 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 ATAD3CQ5T2N8 411 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 C16orf87Q6PH81 154 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 TCF23Q7RTU1 214 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 C5orf24Q7Z6I8 188 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 TMEM86BQ8N661 226 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 ZNF565Q8N9K5 539 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 SUMF2Q8NBJ7 301 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 UXS1Q8NBZ7 420 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 FCGR1BQ92637 280 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 FAM46BQ96A09 425 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 COQ2Q96H96 371 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 OVOL2Q9BRP0 275 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 ALKBH7Q9BT30 221 aaPredicted RBP5.43□□□□□ -1.54
SDCBP-208ENST00000520228 MCRIP2Q9BUT9 160 aaKnown RBP5.43□□□□□ -1.54
SDCBP-208ENST00000520228 SELENOIQ9C0D9 397 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 GAL3ST2Q9H3Q3 398 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 BANF2Q9H503 90 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 SPACA1Q9HBV2 294 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 TAS2R3Q9NYW6 316 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 ZNF581Q9P0T4 197 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 KIF25Q9UIL4 384 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 SELENOKQ9Y6D0 94 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 ARHGAP32A7KAX9 2087 aa5.43□□□□□ -1.54
SDCBP-208ENST00000520228 KBTBD11-OT1A0A1B0GTJ5 212 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 TMEM89A2RUT3 159 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 BTBD17A6NE02 478 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 KRTAP16-1A8MUX0 517 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 MCRIP1C9JLW8 97 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 CCRL2O00421 344 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 SLC22A1O15245 554 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 ST8SIA3O43173 380 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 MMP23AO75900 390 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 CLPXO76031 633 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 ARG1P05089 322 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 CRYBA1P05813 215 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 CD37P11049 281 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 MGMTP16455 207 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 CDK2P24941 298 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 PSMB9P28065 219 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 HTR2CP28335 458 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 GLP1RP43220 463 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 IER3P46695 156 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 PSMD7P51665 324 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 KCTD21Q4G0X4 260 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 C1orf100Q5SVJ3 147 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 PRAMEF5Q5TYX0 476 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 UBE2UQ5VVX9 321 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 RSBN1Q5VWQ0 802 aaPredicted RBP5.42□□□□□ -1.54
SDCBP-208ENST00000520228 OR52W1Q6IF63 320 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 ZNF773Q6PK81 442 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 HEPN1Q6WQI6 88 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 ABHD12Q8N2K0 398 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 TMEM104Q8NE00 496 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 OR11H6Q8NGC7 330 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 KCNG3Q8TAE7 436 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 PLPPR1Q8TBJ4 325 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 NEK7Q8TDX7 302 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 C17orf50Q8WW18 174 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 CHIAQ9BZP6 476 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 CST11Q9H112 138 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 TMEM133Q9H2Q1 129 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 NCOR1P1Q9H4R4 102 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 PLGRKTQ9HBL7 147 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 RAB9BQ9NP90 201 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 NDUFB11Q9NX14 153 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 PEX16Q9Y5Y5 336 aa5.42□□□□□ -1.54
SDCBP-208ENST00000520228 IGHV2-26A0A0B4J1V2 119 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 TRAV39A0A0B4J263 110 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 TRDV1A0A1B0GX56 115 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 TMEM30CPA0ZSE6 113 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 NDUFAF8A1L188 74 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 ZNF729A6NN14 1252 aaPredicted RBP5.41□□□□□ -1.54
SDCBP-208ENST00000520228 ODF3BA8MYP8 253 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 SLC17A2O00624 439 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 PDCD5O14737 125 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 MT-ND4P03905 459 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 GLAP06280 429 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 CGB3P0DN86 165 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 CGB7P0DN87 165 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 GZMHP20718 246 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 FUT3P21217 361 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 GALP22466 123 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 OMGP23515 440 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 MYL9P24844 172 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 RANBP1P43487 201 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 PAX5Q02548 391 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 P2RY14Q15391 338 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 RAB11BQ15907 218 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 C17orf58Q2M2W7 97 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 OR10K2Q6IF99 312 aa5.41□□□□□ -1.54
SDCBP-208ENST00000520228 RAB12Q6IQ22 244 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms