RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 A0A0U1RQK1 487 aa13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 SRRM4A7MD48 611 aaKnown RBP13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 GOSR2O14653 212 aa13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 TIMM23O14925 209 aa13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 EPHA1P21709 976 aa13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 GATA3P23771 443 aa13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 S100GP29377 79 aa13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 LGALS4P56470 323 aa13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 H2BFSP57053 126 aa13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 FAM120AOSQ5T036 256 aa13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 SLC35G3Q8N808 338 aa13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 TMEM56Q96MV1 263 aa13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 MGAT4CQ9UBM8 478 aa13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 TMEM56-RWDD3S4R434 201 aa13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 SONP18583 2426 aaKnown RBP13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 CRYZL1O95825 349 aa13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 IGKV1-5P01602 117 aa13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 GAPDHP04406 335 aaKnown RBP13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 SERPINE2P07093 398 aa13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 HNRNPCP07910 306 aaKnown RBP eCLIP13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 SULT1A3P0DMM9 295 aa13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 SULT1A4P0DMN0 295 aa13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 IL3RAP26951 378 aa13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 G6PCP35575 357 aa13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 THBS3P49746 956 aa13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 OR5AN1Q8NGI8 311 aa13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 SEC22AQ96IW7 307 aa13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 OR10C1Q96KK4 312 aa13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 SLC35D1Q9NTN3 355 aa13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 LIN7CQ9NUP9 197 aaKnown RBP13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 AMMECR1Q9Y4X0 333 aaPredicted RBP13.7□□□□□ -0.22
TSNARE1-205ENST00000520166 HIVEP1P15822 2718 aa13.69□□□□□ -0.22
TSNARE1-205ENST00000520166 MDFIC2A0A1B0GVS7 189 aa13.69□□□□□ -0.22
TSNARE1-205ENST00000520166 KRASP01116 189 aa13.69□□□□□ -0.22
TSNARE1-205ENST00000520166 CNTFRP26992 372 aa13.69□□□□□ -0.22
TSNARE1-205ENST00000520166 CATR1Q13166 79 aa13.69□□□□□ -0.22
TSNARE1-205ENST00000520166 GPR157Q5UAW9 335 aa13.69□□□□□ -0.22
TSNARE1-205ENST00000520166 THOC7Q6I9Y2 204 aaKnown RBP13.69□□□□□ -0.22
TSNARE1-205ENST00000520166 Q6ZRM9 215 aa13.69□□□□□ -0.22
TSNARE1-205ENST00000520166 ZNF695Q8IW36 515 aa13.69□□□□□ -0.22
TSNARE1-205ENST00000520166 CFHR4Q92496 578 aa13.69□□□□□ -0.22
TSNARE1-205ENST00000520166 CHIAQ9BZP6 476 aa13.69□□□□□ -0.22
TSNARE1-205ENST00000520166 RNF212BA8MTL3 300 aa13.68□□□□□ -0.22
TSNARE1-205ENST00000520166 FAM25EA8MYX2 175 aa13.68□□□□□ -0.22
TSNARE1-205ENST00000520166 H7C2Y5 167 aa13.68□□□□□ -0.22
TSNARE1-205ENST00000520166 J3QLI3 93 aa13.68□□□□□ -0.22
TSNARE1-205ENST00000520166 ANXA3P12429 323 aa13.68□□□□□ -0.22
TSNARE1-205ENST00000520166 CD83Q01151 205 aa13.68□□□□□ -0.22
TSNARE1-205ENST00000520166 TAGLNQ01995 201 aaKnown RBP13.68□□□□□ -0.22
TSNARE1-205ENST00000520166 GGNBP1Q5YKI7 109 aa13.68□□□□□ -0.22
TSNARE1-205ENST00000520166 SSX9Q7RTT3 188 aa13.68□□□□□ -0.22
TSNARE1-205ENST00000520166 LGI3Q8N145 548 aa13.68□□□□□ -0.22
TSNARE1-205ENST00000520166 COQ8AQ8NI60 647 aa13.68□□□□□ -0.22
TSNARE1-205ENST00000520166 CUBNO60494 3623 aa13.68□□□□□ -0.22
TSNARE1-205ENST00000520166 C13orf42A0A1B0GVH6 325 aa13.67□□□□□ -0.22
TSNARE1-205ENST00000520166 SMLR1H3BR10 107 aa13.67□□□□□ -0.22
TSNARE1-205ENST00000520166 HNF4GQ14541 408 aa13.67□□□□□ -0.22
TSNARE1-205ENST00000520166 MINOS1Q5TGZ0 78 aa13.67□□□□□ -0.22
TSNARE1-205ENST00000520166 FAM71F2Q6NXP2 309 aa13.67□□□□□ -0.22
TSNARE1-205ENST00000520166 LRTM2Q8N967 370 aa13.67□□□□□ -0.22
TSNARE1-205ENST00000520166 ST6GAL2Q96JF0 529 aa13.67□□□□□ -0.22
TSNARE1-205ENST00000520166 FYTTD1Q96QD9 318 aaKnown RBP13.67□□□□□ -0.22
TSNARE1-205ENST00000520166 PRELID3BQ9Y3B1 194 aa13.67□□□□□ -0.22
TSNARE1-205ENST00000520166 MINOS1-NBL1R4GNA1 71 aa13.67□□□□□ -0.22
TSNARE1-205ENST00000520166 A0A0B4J2A0 478 aa13.67□□□□□ -0.22
TSNARE1-205ENST00000520166 FSHBP01225 129 aa13.67□□□□□ -0.22
TSNARE1-205ENST00000520166 MIDNQ504T8 468 aa13.67□□□□□ -0.22
TSNARE1-205ENST00000520166 Q5BKY6 102 aa13.67□□□□□ -0.22
TSNARE1-205ENST00000520166 RBPMSQ93062 196 aaKnown RBP13.67□□□□□ -0.22
TSNARE1-205ENST00000520166 GPR146Q96CH1 333 aa13.67□□□□□ -0.22
TSNARE1-205ENST00000520166 RANGRFQ9HD47 186 aaPredicted RBP13.67□□□□□ -0.22
TSNARE1-205ENST00000520166 YAE1D1Q9NRH1 226 aa13.67□□□□□ -0.22
TSNARE1-205ENST00000520166 SHPKQ9UHJ6 478 aa13.67□□□□□ -0.22
TSNARE1-205ENST00000520166 TBL2Q9Y4P3 447 aaKnown RBP13.67□□□□□ -0.22
TSNARE1-205ENST00000520166 TRAV3A0A0B4J244 114 aa13.66□□□□□ -0.22
TSNARE1-205ENST00000520166 CD5LO43866 347 aa13.66□□□□□ -0.22
TSNARE1-205ENST00000520166 CEACAM3P40198 252 aa13.66□□□□□ -0.22
TSNARE1-205ENST00000520166 Q71RC1 249 aaPredicted RBP13.66□□□□□ -0.22
TSNARE1-205ENST00000520166 MALSU1Q96EH3 234 aa13.66□□□□□ -0.22
TSNARE1-205ENST00000520166 ADTRPQ96IZ2 230 aa13.66□□□□□ -0.22
TSNARE1-205ENST00000520166 NSG2Q9Y328 171 aa13.66□□□□□ -0.22
TSNARE1-205ENST00000520166 BOLA2-SMG1P6H3BVE0 249 aa13.65□□□□□ -0.22
TSNARE1-205ENST00000520166 NXPH3O95157 252 aa13.65□□□□□ -0.22
TSNARE1-205ENST00000520166 C11orf88Q6PI97 169 aa13.65□□□□□ -0.22
TSNARE1-205ENST00000520166 R3HDM4Q96D70 268 aa13.65□□□□□ -0.22
TSNARE1-205ENST00000520166 C5orf51A6NDU8 294 aa13.64□□□□□ -0.23
TSNARE1-205ENST00000520166 VENTXO95231 258 aa13.64□□□□□ -0.23
TSNARE1-205ENST00000520166 LY6G6DO95868 133 aa13.64□□□□□ -0.23
TSNARE1-205ENST00000520166 HPRT1P00492 218 aa13.64□□□□□ -0.23
TSNARE1-205ENST00000520166 IGKV1D-33P01593 117 aa13.64□□□□□ -0.23
TSNARE1-205ENST00000520166 IGKV1-33P01594 117 aa13.64□□□□□ -0.23
TSNARE1-205ENST00000520166 SNRNP70P08621 437 aaKnown RBP13.64□□□□□ -0.23
TSNARE1-205ENST00000520166 OR9G9P0C7N8 305 aa13.64□□□□□ -0.23
TSNARE1-205ENST00000520166 F2RL1P55085 397 aa13.64□□□□□ -0.23
TSNARE1-205ENST00000520166 NMSQ5H8A3 153 aa13.64□□□□□ -0.23
TSNARE1-205ENST00000520166 OR5M8Q8NGP6 311 aa13.64□□□□□ -0.23
TSNARE1-205ENST00000520166 OR4S2Q8NH73 311 aa13.64□□□□□ -0.23
TSNARE1-205ENST00000520166 PIFOQ8TCI5 191 aa13.64□□□□□ -0.23
TSNARE1-205ENST00000520166 GSX1Q9H4S2 264 aaPredicted RBP13.64□□□□□ -0.23
TSNARE1-205ENST00000520166 WASHC3Q9Y3C0 194 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms