RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 IMP4Q96G21 291 aaKnown RBP1.89□□□□□ -2.11
PTPN12-213ENST00000519553 MROQ9BYG7 248 aa1.89□□□□□ -2.11
PTPN12-213ENST00000519553 TLNRD1Q9H1K6 362 aa1.89□□□□□ -2.11
PTPN12-213ENST00000519553 OR51B6Q9H340 312 aa1.89□□□□□ -2.11
PTPN12-213ENST00000519553 XPNPEP1Q9NQW7 623 aa1.89□□□□□ -2.11
PTPN12-213ENST00000519553 PARVAQ9NVD7 372 aa1.89□□□□□ -2.11
PTPN12-213ENST00000519553 POLR1DQ9Y2S0 133 aa1.89□□□□□ -2.11
PTPN12-213ENST00000519553 AMMECR1Q9Y4X0 333 aaPredicted RBP1.89□□□□□ -2.11
PTPN12-213ENST00000519553 ALG5Q9Y673 324 aa1.89□□□□□ -2.11
PTPN12-213ENST00000519553 ZNF638Q14966 1978 aaKnown RBP1.89□□□□□ -2.11
PTPN12-213ENST00000519553 FLT4P35916 1363 aa1.88□□□□□ -2.11
PTPN12-213ENST00000519553 EIF3AQ14152 1382 aaKnown RBP1.88□□□□□ -2.11
PTPN12-213ENST00000519553 A0A0G2JQZ4 141 aa1.88□□□□□ -2.11
PTPN12-213ENST00000519553 M0QYV0 167 aa1.88□□□□□ -2.11
PTPN12-213ENST00000519553 ALOX5APP20292 161 aa1.88□□□□□ -2.11
PTPN12-213ENST00000519553 LPAR6P43657 344 aa1.88□□□□□ -2.11
PTPN12-213ENST00000519553 SULT1A1P50225 295 aa1.88□□□□□ -2.11
PTPN12-213ENST00000519553 SULT1A2P50226 295 aa1.88□□□□□ -2.11
PTPN12-213ENST00000519553 AKR1C2P52895 323 aa1.88□□□□□ -2.11
PTPN12-213ENST00000519553 OR4D2P58180 307 aa1.88□□□□□ -2.11
PTPN12-213ENST00000519553 DAD1P61803 113 aa1.88□□□□□ -2.11
PTPN12-213ENST00000519553 PRDX4Q13162 271 aa1.88□□□□□ -2.11
PTPN12-213ENST00000519553 PPP1R1AQ13522 171 aa1.88□□□□□ -2.11
PTPN12-213ENST00000519553 C1DQ13901 141 aaKnown RBP1.88□□□□□ -2.11
PTPN12-213ENST00000519553 EBPQ15125 230 aaKnown RBP1.88□□□□□ -2.11
PTPN12-213ENST00000519553 LRRC75BQ2VPJ9 315 aa1.88□□□□□ -2.11
PTPN12-213ENST00000519553 MRPL51Q4U2R6 128 aaKnown RBP1.88□□□□□ -2.11
PTPN12-213ENST00000519553 CENPWQ5EE01 88 aa1.88□□□□□ -2.11
PTPN12-213ENST00000519553 SPATA31B1PQ5VZV4 182 aa1.88□□□□□ -2.11
PTPN12-213ENST00000519553 SCGB1D4Q6XE38 83 aa1.88□□□□□ -2.11
PTPN12-213ENST00000519553 C1orf158Q8N1D5 194 aa1.88□□□□□ -2.11
PTPN12-213ENST00000519553 LRRC25Q8N386 305 aaPredicted RBP1.88□□□□□ -2.11
PTPN12-213ENST00000519553 TMEM161BQ8NDZ6 487 aa1.88□□□□□ -2.11
PTPN12-213ENST00000519553 TNFAIP8L1Q8WVP5 186 aa1.88□□□□□ -2.11
PTPN12-213ENST00000519553 ASB17Q8WXJ9 295 aa1.88□□□□□ -2.11
PTPN12-213ENST00000519553 TIPINQ9BVW5 301 aa1.88□□□□□ -2.11
PTPN12-213ENST00000519553 GTSF1LQ9H1H1 148 aa1.88□□□□□ -2.11
PTPN12-213ENST00000519553 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.88□□□□□ -2.11
PTPN12-213ENST00000519553 TXNL4BQ9NX01 149 aaKnown RBP1.88□□□□□ -2.11
PTPN12-213ENST00000519553 TMEM216Q9P0N5 145 aa1.88□□□□□ -2.11
PTPN12-213ENST00000519553 ADAMTSL1Q8N6G6 1762 aa1.87□□□□□ -2.11
PTPN12-213ENST00000519553 E5RI56 91 aa1.87□□□□□ -2.11
PTPN12-213ENST00000519553 ARL6IP5O75915 188 aa1.87□□□□□ -2.11
PTPN12-213ENST00000519553 ATP5G1P05496 136 aa1.87□□□□□ -2.11
PTPN12-213ENST00000519553 IL3P08700 152 aa1.87□□□□□ -2.11
PTPN12-213ENST00000519553 DDTP30046 118 aa1.87□□□□□ -2.11
PTPN12-213ENST00000519553 ADORA1P30542 326 aa1.87□□□□□ -2.11
PTPN12-213ENST00000519553 SERPINB9P50453 376 aa1.87□□□□□ -2.11
PTPN12-213ENST00000519553 NAA20P61599 178 aa1.87□□□□□ -2.11
PTPN12-213ENST00000519553 MAPK14Q16539 360 aa1.87□□□□□ -2.11
PTPN12-213ENST00000519553 SFXN4Q6P4A7 337 aa1.87□□□□□ -2.11
PTPN12-213ENST00000519553 COMMD7Q86VX2 200 aa1.87□□□□□ -2.11
PTPN12-213ENST00000519553 DOLPP1Q86YN1 238 aa1.87□□□□□ -2.11
PTPN12-213ENST00000519553 GID4Q8IVV7 300 aa1.87□□□□□ -2.11
PTPN12-213ENST00000519553 OR51H1Q8NH63 302 aa1.87□□□□□ -2.11
PTPN12-213ENST00000519553 JOSD2Q8TAC2 188 aa1.87□□□□□ -2.11
PTPN12-213ENST00000519553 TMBIM1Q969X1 311 aa1.87□□□□□ -2.11
PTPN12-213ENST00000519553 TMA16Q96EY4 203 aaKnown RBP1.87□□□□□ -2.11
PTPN12-213ENST00000519553 ZNF625Q96I27 306 aaPredicted RBP1.87□□□□□ -2.11
PTPN12-213ENST00000519553 GNB1LQ9BYB4 327 aa1.87□□□□□ -2.11
PTPN12-213ENST00000519553 VPS29Q9UBQ0 182 aa1.87□□□□□ -2.11
PTPN12-213ENST00000519553 GLS2Q9UI32 602 aa1.87□□□□□ -2.11
PTPN12-213ENST00000519553 DKKL1Q9UK85 242 aa1.87□□□□□ -2.11
PTPN12-213ENST00000519553 PRELID1Q9Y255 219 aa1.87□□□□□ -2.11
PTPN12-213ENST00000519553 DNMT1P26358 1616 aaKnown RBP1.87□□□□□ -2.11
PTPN12-213ENST00000519553 ATAD5Q96QE3 1844 aa1.87□□□□□ -2.11
PTPN12-213ENST00000519553 NPATQ14207 1427 aa1.86□□□□□ -2.11
PTPN12-213ENST00000519553 CLDN24A6NM45 220 aa1.86□□□□□ -2.11
PTPN12-213ENST00000519553 COPEO14579 308 aa1.86□□□□□ -2.11
PTPN12-213ENST00000519553 LY6HO94772 140 aa1.86□□□□□ -2.11
PTPN12-213ENST00000519553 HAND1O96004 215 aa1.86□□□□□ -2.11
PTPN12-213ENST00000519553 IL6P05231 212 aa1.86□□□□□ -2.11
PTPN12-213ENST00000519553 CRYBA1P05813 215 aa1.86□□□□□ -2.11
PTPN12-213ENST00000519553 CXCL2P19875 107 aa1.86□□□□□ -2.11
PTPN12-213ENST00000519553 CXCL3P19876 107 aa1.86□□□□□ -2.11
PTPN12-213ENST00000519553 GADD45AP24522 165 aa1.86□□□□□ -2.11
PTPN12-213ENST00000519553 CCR7P32248 378 aa1.86□□□□□ -2.11
PTPN12-213ENST00000519553 PPP1CCP36873 323 aaKnown RBP1.86□□□□□ -2.11
PTPN12-213ENST00000519553 TCL1AP56279 114 aa1.86□□□□□ -2.11
PTPN12-213ENST00000519553 RPS24P62847 133 aaKnown RBP1.86□□□□□ -2.11
PTPN12-213ENST00000519553 EMX1Q04741 257 aaPredicted RBP1.86□□□□□ -2.11
PTPN12-213ENST00000519553 GUK1Q16774 197 aa1.86□□□□□ -2.11
PTPN12-213ENST00000519553 HIST2H3PS2Q5TEC6 136 aa1.86□□□□□ -2.11
PTPN12-213ENST00000519553 C1orf195Q5TG92 126 aa1.86□□□□□ -2.11
PTPN12-213ENST00000519553 LGALS9CQ6DKI2 356 aa1.86□□□□□ -2.11
PTPN12-213ENST00000519553 RASSF6Q6ZTQ3 369 aa1.86□□□□□ -2.11
PTPN12-213ENST00000519553 CLDN22Q8N7P3 220 aa1.86□□□□□ -2.11
PTPN12-213ENST00000519553 EEF1AKMT1Q8WVE0 214 aa1.86□□□□□ -2.11
PTPN12-213ENST00000519553 OR7D2Q96RA2 312 aa1.86□□□□□ -2.11
PTPN12-213ENST00000519553 OR52B2Q96RD2 323 aa1.86□□□□□ -2.11
PTPN12-213ENST00000519553 PRRT1Q99946 306 aa1.86□□□□□ -2.11
PTPN12-213ENST00000519553 OR51I1Q9H343 314 aa1.86□□□□□ -2.11
PTPN12-213ENST00000519553 STOML2Q9UJZ1 356 aa1.86□□□□□ -2.11
PTPN12-213ENST00000519553 LSM5Q9Y4Y9 91 aaKnown RBP1.86□□□□□ -2.11
PTPN12-213ENST00000519553 NCOA1Q15788 1441 aa1.85□□□□□ -2.11
PTPN12-213ENST00000519553 MYO5BQ9ULV0 1848 aa1.85□□□□□ -2.11
PTPN12-213ENST00000519553 PRRC2BQ5JSZ5 2229 aaKnown RBP1.85□□□□□ -2.11
PTPN12-213ENST00000519553 IGHV3-73A0A0B4J1V6 119 aa1.85□□□□□ -2.11
PTPN12-213ENST00000519553 SMIM9A6NGZ8 99 aa1.85□□□□□ -2.11
PTPN12-213ENST00000519553 TMEM238C9JI98 176 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms