RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 RRASP10301 218 aa11.84□□□□□ -0.51
CLN8-204ENST00000519254 COMMD7Q86VX2 200 aa11.84□□□□□ -0.51
CLN8-204ENST00000519254 OR10A7Q8NGE5 316 aa11.84□□□□□ -0.51
CLN8-204ENST00000519254 ZNF714Q96N38 554 aa11.84□□□□□ -0.51
CLN8-204ENST00000519254 ZNF251Q9BRH9 671 aa11.84□□□□□ -0.51
CLN8-204ENST00000519254 GAL3ST2Q9H3Q3 398 aa11.84□□□□□ -0.51
CLN8-204ENST00000519254 LYRM2Q9NU23 88 aaPredicted RBP11.84□□□□□ -0.51
CLN8-204ENST00000519254 COA4Q9NYJ1 87 aa11.84□□□□□ -0.51
CLN8-204ENST00000519254 LPAR3Q9UBY5 353 aa11.84□□□□□ -0.51
CLN8-204ENST00000519254 FASNP49327 2511 aaKnown RBP11.84□□□□□ -0.51
CLN8-204ENST00000519254 MALRD1Q5VYJ5 2156 aa11.84□□□□□ -0.51
CLN8-204ENST00000519254 CENPEQ02224 2701 aa11.84□□□□□ -0.51
CLN8-204ENST00000519254 SAA2-SAA4A0A096LPE2 208 aa11.84□□□□□ -0.51
CLN8-204ENST00000519254 TRBV23-1A0A0A0MS06 115 aa11.84□□□□□ -0.51
CLN8-204ENST00000519254 SAA2P0DJI9 122 aaPredicted RBP11.84□□□□□ -0.51
CLN8-204ENST00000519254 VAMP2P63027 116 aa11.84□□□□□ -0.51
CLN8-204ENST00000519254 EWSR1Q01844 656 aaKnown RBP eCLIP11.84□□□□□ -0.51
CLN8-204ENST00000519254 HEPN1Q6WQI6 88 aa11.84□□□□□ -0.51
CLN8-204ENST00000519254 SLC25A48Q6ZT89 311 aaKnown RBP11.84□□□□□ -0.51
CLN8-204ENST00000519254 PDZD9Q8IXQ8 264 aa11.84□□□□□ -0.51
CLN8-204ENST00000519254 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.84□□□□□ -0.51
CLN8-204ENST00000519254 CD300LFQ8TDQ1 290 aa11.84□□□□□ -0.51
CLN8-204ENST00000519254 PTPN13Q12923 2485 aa11.84□□□□□ -0.51
CLN8-204ENST00000519254 IGHV4-61A0A0C4DH41 118 aa11.83□□□□□ -0.52
CLN8-204ENST00000519254 VWC2LB2RUY7 222 aa11.83□□□□□ -0.52
CLN8-204ENST00000519254 C22orf46C9J442 243 aa11.83□□□□□ -0.52
CLN8-204ENST00000519254 WRBO00258 174 aa11.83□□□□□ -0.52
CLN8-204ENST00000519254 RAB29O14966 203 aa11.83□□□□□ -0.52
CLN8-204ENST00000519254 GPR37O15354 613 aa11.83□□□□□ -0.52
CLN8-204ENST00000519254 GNG10P50151 68 aa11.83□□□□□ -0.52
CLN8-204ENST00000519254 CAV2P51636 162 aa11.83□□□□□ -0.52
CLN8-204ENST00000519254 DLX6P56179 175 aa11.83□□□□□ -0.52
CLN8-204ENST00000519254 DSCR9P59020 149 aa11.83□□□□□ -0.52
CLN8-204ENST00000519254 LCN2P80188 198 aa11.83□□□□□ -0.52
CLN8-204ENST00000519254 MIDNQ504T8 468 aa11.83□□□□□ -0.52
CLN8-204ENST00000519254 TMEM252Q8N6L7 170 aa11.83□□□□□ -0.52
CLN8-204ENST00000519254 TMED6Q8WW62 240 aa11.83□□□□□ -0.52
CLN8-204ENST00000519254 DDB2Q92466 427 aa11.83□□□□□ -0.52
CLN8-204ENST00000519254 RAB39BQ96DA2 213 aa11.83□□□□□ -0.52
CLN8-204ENST00000519254 ARV1Q9H2C2 271 aa11.83□□□□□ -0.52
CLN8-204ENST00000519254 MED9Q9NWA0 146 aa11.83□□□□□ -0.52
CLN8-204ENST00000519254 LOC105371242A0A075B767 164 aa11.82□□□□□ -0.52
CLN8-204ENST00000519254 PPIAL4CA0A0B4J2A2 164 aa11.82□□□□□ -0.52
CLN8-204ENST00000519254 TOR1AO14656 332 aa11.82□□□□□ -0.52
CLN8-204ENST00000519254 SYNGR2O43760 224 aa11.82□□□□□ -0.52
CLN8-204ENST00000519254 FCGR3BO75015 233 aa11.82□□□□□ -0.52
CLN8-204ENST00000519254 JTBO76095 146 aa11.82□□□□□ -0.52
CLN8-204ENST00000519254 ATG12O94817 140 aa11.82□□□□□ -0.52
CLN8-204ENST00000519254 PPIAL4GP0DN37 164 aa11.82□□□□□ -0.52
CLN8-204ENST00000519254 LMO4P61968 165 aa11.82□□□□□ -0.52
CLN8-204ENST00000519254 EIF5AP63241 154 aaKnown RBP11.82□□□□□ -0.52
CLN8-204ENST00000519254 Q5PR19 223 aa11.82□□□□□ -0.52
CLN8-204ENST00000519254 LYG1Q8N1E2 194 aa11.82□□□□□ -0.52
CLN8-204ENST00000519254 UBAC2Q8NBM4 344 aa11.82□□□□□ -0.52
CLN8-204ENST00000519254 RAB40CQ96S21 281 aa11.82□□□□□ -0.52
CLN8-204ENST00000519254 REG4Q9BYZ8 158 aa11.82□□□□□ -0.52
CLN8-204ENST00000519254 TET2Q6N021 2002 aaPredicted RBP11.82□□□□□ -0.52
CLN8-204ENST00000519254 POLQO75417 2590 aa11.82□□□□□ -0.52
CLN8-204ENST00000519254 ABCA12Q86UK0 2595 aa11.82□□□□□ -0.52
CLN8-204ENST00000519254 NBPF19A0A087WUL8 3843 aa11.82□□□□□ -0.52
CLN8-204ENST00000519254 RBFOX2O43251 390 aaKnown RBP eCLIP11.82□□□□□ -0.521e-7■■■□□ 14.8
CLN8-204ENST00000519254 FGF16O43320 207 aa11.82□□□□□ -0.52
CLN8-204ENST00000519254 FAM157CP0CG43 387 aa11.82□□□□□ -0.52
CLN8-204ENST00000519254 ZFP36P26651 326 aaKnown RBP11.82□□□□□ -0.52
CLN8-204ENST00000519254 SLC25A31Q9H0C2 315 aa11.82□□□□□ -0.52
CLN8-204ENST00000519254 LPAR2Q9HBW0 351 aa11.82□□□□□ -0.52
CLN8-204ENST00000519254 ZNRD1Q9P1U0 126 aa11.82□□□□□ -0.52
CLN8-204ENST00000519254 ONECUT1Q9UBC0 465 aa11.82□□□□□ -0.52
CLN8-204ENST00000519254 MARCH11A6NNE9 402 aa11.81□□□□□ -0.52
CLN8-204ENST00000519254 FAM90A26D6RGX4 464 aa11.81□□□□□ -0.52
CLN8-204ENST00000519254 HPRT1P00492 218 aa11.81□□□□□ -0.52
CLN8-204ENST00000519254 H2BFWTQ7Z2G1 175 aa11.81□□□□□ -0.52
CLN8-204ENST00000519254 LRRC75A-AS1Q8N1F1 130 aa11.81□□□□□ -0.52
CLN8-204ENST00000519254 R3HDM4Q96D70 268 aa11.81□□□□□ -0.52
CLN8-204ENST00000519254 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.81□□□□□ -0.52
CLN8-204ENST00000519254 PLA2G2EQ9NZK7 142 aa11.81□□□□□ -0.52
CLN8-204ENST00000519254 HSPB7Q9UBY9 170 aa11.81□□□□□ -0.52
CLN8-204ENST00000519254 PRELID3BQ9Y3B1 194 aa11.81□□□□□ -0.52
CLN8-204ENST00000519254 ANKRD17O75179 2603 aaKnown RBP11.81□□□□□ -0.52
CLN8-204ENST00000519254 CSMD2Q7Z408 3487 aa11.8□□□□□ -0.52
CLN8-204ENST00000519254 KIR2DS2P43631 304 aa11.8□□□□□ -0.52
CLN8-204ENST00000519254 TNFRSF9Q07011 255 aa11.8□□□□□ -0.52
CLN8-204ENST00000519254 C11orf42Q8N5U0 333 aa11.8□□□□□ -0.52
CLN8-204ENST00000519254 ZNF383Q8NA42 475 aa11.8□□□□□ -0.52
CLN8-204ENST00000519254 MBD6Q96DN6 1003 aa11.8□□□□□ -0.52
CLN8-204ENST00000519254 SMIM8Q96KF7 97 aa11.8□□□□□ -0.52
CLN8-204ENST00000519254 S1PR3Q99500 378 aa11.8□□□□□ -0.52
CLN8-204ENST00000519254 WSB1Q9Y6I7 421 aa11.8□□□□□ -0.52
CLN8-204ENST00000519254 BORCS7-ASMTA0A0B4J1R7 106 aa11.79□□□□□ -0.52
CLN8-204ENST00000519254 A0A1W2PPH5 198 aa11.79□□□□□ -0.52
CLN8-204ENST00000519254 MFSD2BA6NFX1 497 aa11.79□□□□□ -0.52
CLN8-204ENST00000519254 FAM157AC9JC47 383 aa11.79□□□□□ -0.52
CLN8-204ENST00000519254 TEX46H3BTG2 121 aa11.79□□□□□ -0.52
CLN8-204ENST00000519254 TXNL1O43396 289 aa11.79□□□□□ -0.52
CLN8-204ENST00000519254 CST7O76096 145 aa11.79□□□□□ -0.52
CLN8-204ENST00000519254 LIPFP07098 398 aa11.79□□□□□ -0.52
CLN8-204ENST00000519254 IAPPP10997 89 aa11.79□□□□□ -0.52
CLN8-204ENST00000519254 SLC25A16P16260 332 aa11.79□□□□□ -0.52
CLN8-204ENST00000519254 THBS3P49746 956 aa11.79□□□□□ -0.52
CLN8-204ENST00000519254 DLX1P56177 255 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms