RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 APOA2P02652 100 aa4.82□□□□□ -1.64
MRPS28-203ENST00000518371 EIF4EP06730 217 aaKnown RBP4.82□□□□□ -1.64
MRPS28-203ENST00000518371 NFYAP23511 347 aaPredicted RBP4.82□□□□□ -1.64
MRPS28-203ENST00000518371 PRSS3P35030 304 aa4.82□□□□□ -1.64
MRPS28-203ENST00000518371 SOX6P35712 828 aa4.82□□□□□ -1.64
MRPS28-203ENST00000518371 LUMP51884 338 aaPredicted RBP4.82□□□□□ -1.64
MRPS28-203ENST00000518371 TAS2R20P59543 309 aa4.82□□□□□ -1.64
MRPS28-203ENST00000518371 RPS16P62249 146 aaKnown RBP4.82□□□□□ -1.64
MRPS28-203ENST00000518371 SLC35B1P78383 322 aa4.82□□□□□ -1.64
MRPS28-203ENST00000518371 CD83Q01151 205 aa4.82□□□□□ -1.64
MRPS28-203ENST00000518371 CBX3Q13185 183 aa4.82□□□□□ -1.64
MRPS28-203ENST00000518371 PLGLAQ15195 96 aa4.82□□□□□ -1.64
MRPS28-203ENST00000518371 C2orf68Q2NKX9 166 aa4.82□□□□□ -1.64
MRPS28-203ENST00000518371 KHDC1LQ5JSQ8 128 aa4.82□□□□□ -1.64
MRPS28-203ENST00000518371 HIST2H2BDQ6DRA6 164 aa4.82□□□□□ -1.64
MRPS28-203ENST00000518371 LIN54Q6MZP7 749 aa4.82□□□□□ -1.64
MRPS28-203ENST00000518371 GVQW1Q8N7I0 195 aa4.82□□□□□ -1.64
MRPS28-203ENST00000518371 OR4X2Q8NGF9 303 aa4.82□□□□□ -1.64
MRPS28-203ENST00000518371 OR5AN1Q8NGI8 311 aa4.82□□□□□ -1.64
MRPS28-203ENST00000518371 FAM110DQ8TAY7 271 aaPredicted RBP4.82□□□□□ -1.64
MRPS28-203ENST00000518371 CHPT1Q8WUD6 406 aa4.82□□□□□ -1.64
MRPS28-203ENST00000518371 FLYWCH2Q96CP2 140 aaKnown RBP4.82□□□□□ -1.64
MRPS28-203ENST00000518371 RITA1Q96K30 269 aa4.82□□□□□ -1.64
MRPS28-203ENST00000518371 NOL4LQ96MY1 436 aaPredicted RBP4.82□□□□□ -1.64
MRPS28-203ENST00000518371 RNF5Q99942 180 aa4.82□□□□□ -1.64
MRPS28-203ENST00000518371 GON7Q9BXV9 100 aa4.82□□□□□ -1.64
MRPS28-203ENST00000518371 SLC35D1Q9NTN3 355 aa4.82□□□□□ -1.64
MRPS28-203ENST00000518371 NECAP2Q9NVZ3 263 aa4.82□□□□□ -1.64
MRPS28-203ENST00000518371 SDHAF2Q9NX18 166 aa4.82□□□□□ -1.64
MRPS28-203ENST00000518371 ZNF107Q9UII5 783 aaPredicted RBP4.82□□□□□ -1.64
MRPS28-203ENST00000518371 LINC00527Q9UJ94 153 aa4.82□□□□□ -1.64
MRPS28-203ENST00000518371 GAB2Q9UQC2 676 aa4.82□□□□□ -1.64
MRPS28-203ENST00000518371 OR2W1Q9Y3N9 320 aa4.82□□□□□ -1.64
MRPS28-203ENST00000518371 A0A1W2PRX2 142 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 CCDC160A6NGH7 325 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 AP4M1O00189 453 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 RGS5O15539 181 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 TUSC2O75896 110 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 SLC22A5O76082 557 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 HLA-DQB1P01920 261 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 OPN1MWP04001 364 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 OPN1MW2P0DN77 364 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 OPN1MW3P0DN78 364 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 OR5H8P0DN80 308 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 ELK1P19419 428 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 CNTFRP26992 372 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 FCGR2CP31995 323 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 THBS3P49746 956 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 TMBIM6P55061 237 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 LINC00205P59089 165 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 SPCS2Q15005 226 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 C5orf64Q2M2E5 130 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 ZNF329Q86UD4 541 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 PDPNQ86YL7 162 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 SNX29P2Q8IUI4 249 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 FAM71E2Q8N5Q1 922 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 ZNF383Q8NA42 475 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 NPBQ8NG41 125 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 OR5AP2Q8NGF4 316 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 RAB2BQ8WUD1 216 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 ADTRPQ96IZ2 230 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 CLCC1Q96S66 551 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 TSNAXQ99598 290 aaKnown RBP4.81□□□□□ -1.64
MRPS28-203ENST00000518371 CITED2Q99967 270 aaPredicted RBP4.81□□□□□ -1.64
MRPS28-203ENST00000518371 FBXL15Q9H469 300 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 TNFRSF18Q9Y5U5 241 aa4.81□□□□□ -1.64
MRPS28-203ENST00000518371 RRHO14718 337 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 PMP2P02689 132 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 RRASP10301 218 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 VDAC1P21796 283 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 AADACP22760 399 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 LGALS7P47929 136 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 TAS2R46P59540 309 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 FXYD4P59646 89 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 HERV-K104P61576 105 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 TSPAN5P62079 268 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 CDK10Q15131 360 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 PSG5Q15238 335 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 RTL8BQ17RB0 113 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 ZNF660Q6AZW8 331 aaPredicted RBP4.8□□□□□ -1.64
MRPS28-203ENST00000518371 TEX38Q6PEX7 206 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 C10orf99Q6UWK7 81 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 NDUFA11Q86Y39 141 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 STPG2Q8N412 459 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 COMMD1Q8N668 190 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 ZNF645Q8N7E2 425 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 OR4F17Q8NGA8 305 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 OR5H2Q8NGV7 314 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 WIPF2Q8TF74 440 aaPredicted RBP4.8□□□□□ -1.64
MRPS28-203ENST00000518371 ABHD5Q8WTS1 349 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 C15orf40Q8WUR7 153 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 SECTM1Q8WVN6 248 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 GIMAP1Q8WWP7 306 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 R3HDM4Q96D70 268 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 OR4F4Q96R69 305 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 BCL7BQ9BQE9 202 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 HSPB9Q9BQS6 159 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 DCUN1D5Q9BTE7 237 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 SLC5A7Q9GZV3 580 aa4.8□□□□□ -1.64
MRPS28-203ENST00000518371 MMP27Q9H306 513 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms