RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 AGMATQ9BSE5 352 aa8.61□□□□□ -1.03
TRAPPC9-203ENST00000517667 FUNDC2Q9BWH2 189 aa8.61□□□□□ -1.03
TRAPPC9-203ENST00000517667 RBM38Q9H0Z9 239 aaKnown RBP8.61□□□□□ -1.03
TRAPPC9-203ENST00000517667 TP53TG1Q9Y2A0 90 aa8.61□□□□□ -1.03
TRAPPC9-203ENST00000517667 LOC102724200A0A096LPH7 203 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC9-203ENST00000517667 A0A0J9YWU9 116 aa8.6□□□□□ -1.03
TRAPPC9-203ENST00000517667 TRBV5-5A0A0J9YX44 114 aa8.6□□□□□ -1.03
TRAPPC9-203ENST00000517667 FAM223BA6NKX1 122 aa8.6□□□□□ -1.03
TRAPPC9-203ENST00000517667 BMPR1BO00238 502 aa8.6□□□□□ -1.03
TRAPPC9-203ENST00000517667 TUSC2O75896 110 aa8.6□□□□□ -1.03
TRAPPC9-203ENST00000517667 GABARAPO95166 117 aa8.6□□□□□ -1.03
TRAPPC9-203ENST00000517667 LIMS3P0CW19 117 aa8.6□□□□□ -1.03
TRAPPC9-203ENST00000517667 LIMS4P0CW20 117 aa8.6□□□□□ -1.03
TRAPPC9-203ENST00000517667 ZBTB25P24278 435 aa8.6□□□□□ -1.03
TRAPPC9-203ENST00000517667 KIR2DS2P43631 304 aa8.6□□□□□ -1.03
TRAPPC9-203ENST00000517667 DEFA5Q01523 94 aa8.6□□□□□ -1.03
TRAPPC9-203ENST00000517667 CNPY1Q3B7I2 92 aa8.6□□□□□ -1.03
TRAPPC9-203ENST00000517667 YIF1BQ5BJH7 314 aa8.6□□□□□ -1.03
TRAPPC9-203ENST00000517667 LYG2Q86SG7 212 aa8.6□□□□□ -1.03
TRAPPC9-203ENST00000517667 FAM223AQ8IWN6 122 aa8.6□□□□□ -1.03
TRAPPC9-203ENST00000517667 TMEM217Q8N7C4 229 aa8.6□□□□□ -1.03
TRAPPC9-203ENST00000517667 DRAXINQ8NBI3 349 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC9-203ENST00000517667 THRSPQ92748 146 aa8.6□□□□□ -1.03
TRAPPC9-203ENST00000517667 NEDD4LQ96PU5 975 aa8.6□□□□□ -1.03
TRAPPC9-203ENST00000517667 PHB2Q99623 299 aa8.6□□□□□ -1.03
TRAPPC9-203ENST00000517667 GHRLQ9UBU3 117 aa8.6□□□□□ -1.03
TRAPPC9-203ENST00000517667 SSR3Q9UNL2 185 aa8.6□□□□□ -1.03
TRAPPC9-203ENST00000517667 DNAH10Q8IVF4 4471 aa8.59□□□□□ -1.03
TRAPPC9-203ENST00000517667 TRAV8-7A0A075B6U6 113 aa8.59□□□□□ -1.03
TRAPPC9-203ENST00000517667 DEDDO75618 318 aa8.59□□□□□ -1.03
TRAPPC9-203ENST00000517667 FOLR2P14207 255 aa8.59□□□□□ -1.03
TRAPPC9-203ENST00000517667 SNRPBP14678 240 aaKnown RBP8.59□□□□□ -1.03
TRAPPC9-203ENST00000517667 GALP22466 123 aa8.59□□□□□ -1.03
TRAPPC9-203ENST00000517667 BMI1P35226 326 aa8.59□□□□□ -1.03
TRAPPC9-203ENST00000517667 ETV1P50549 477 aa8.59□□□□□ -1.03
TRAPPC9-203ENST00000517667 EXOSC2Q13868 293 aaKnown RBP8.59□□□□□ -1.03
TRAPPC9-203ENST00000517667 ANKRD55Q3KP44 614 aa8.59□□□□□ -1.03
TRAPPC9-203ENST00000517667 NKAIN3Q8N8D7 197 aa8.59□□□□□ -1.03
TRAPPC9-203ENST00000517667 ZNF383Q8NA42 475 aa8.59□□□□□ -1.03
TRAPPC9-203ENST00000517667 FAM46BQ96A09 425 aa8.59□□□□□ -1.03
TRAPPC9-203ENST00000517667 YIPF6Q96EC8 236 aa8.59□□□□□ -1.03
TRAPPC9-203ENST00000517667 WDR89Q96FK6 387 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC9-203ENST00000517667 UQCC2Q9BRT2 126 aa8.59□□□□□ -1.03
TRAPPC9-203ENST00000517667 PARP12Q9H0J9 701 aaKnown RBP8.59□□□□□ -1.03
TRAPPC9-203ENST00000517667 CHMP1AQ9HD42 196 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC9-203ENST00000517667 ZNF221Q9UK13 617 aa8.59□□□□□ -1.03
TRAPPC9-203ENST00000517667 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.58□□□□□ -1.04
TRAPPC9-203ENST00000517667 C2orf70A6NJV1 201 aa8.58□□□□□ -1.04
TRAPPC9-203ENST00000517667 H3BMQ9 156 aa8.58□□□□□ -1.04
TRAPPC9-203ENST00000517667 OGG1O15527 345 aa8.58□□□□□ -1.04
TRAPPC9-203ENST00000517667 NAPSAO96009 420 aa8.58□□□□□ -1.04
TRAPPC9-203ENST00000517667 OR9G9P0C7N8 305 aa8.58□□□□□ -1.04
TRAPPC9-203ENST00000517667 CEACAM6P40199 344 aa8.58□□□□□ -1.04
TRAPPC9-203ENST00000517667 RHOGP84095 191 aa8.58□□□□□ -1.04
TRAPPC9-203ENST00000517667 ATP5G2Q06055 141 aa8.58□□□□□ -1.04
TRAPPC9-203ENST00000517667 PJVKQ0ZLH3 352 aa8.58□□□□□ -1.04
TRAPPC9-203ENST00000517667 CBX3Q13185 183 aa8.58□□□□□ -1.04
TRAPPC9-203ENST00000517667 ZNF880Q6PDB4 577 aa8.58□□□□□ -1.04
TRAPPC9-203ENST00000517667 Q6ZWC4 215 aa8.58□□□□□ -1.04
TRAPPC9-203ENST00000517667 ADAD2Q8NCV1 583 aaKnown RBP8.58□□□□□ -1.04
TRAPPC9-203ENST00000517667 OR52B4Q8NGK2 314 aa8.58□□□□□ -1.04
TRAPPC9-203ENST00000517667 OR13C5Q8NGS8 318 aa8.58□□□□□ -1.04
TRAPPC9-203ENST00000517667 PTX4Q96A99 478 aa8.58□□□□□ -1.04
TRAPPC9-203ENST00000517667 C11orf54Q9H0W9 315 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC9-203ENST00000517667 RIMS4Q9H426 269 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC9-203ENST00000517667 AKIP1Q9NQ31 210 aa8.58□□□□□ -1.04
TRAPPC9-203ENST00000517667 NDUFB11Q9NX14 153 aa8.58□□□□□ -1.04
TRAPPC9-203ENST00000517667 BABAM2Q9NXR7 383 aa8.58□□□□□ -1.04
TRAPPC9-203ENST00000517667 ZNF230Q9UIE0 474 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC9-203ENST00000517667 MGAT4AQ9UM21 535 aa8.58□□□□□ -1.04
TRAPPC9-203ENST00000517667 LSM2Q9Y333 95 aaKnown RBP8.58□□□□□ -1.04
TRAPPC9-203ENST00000517667 LGALS9O00182 355 aa8.57□□□□□ -1.04
TRAPPC9-203ENST00000517667 MPPED1O15442 326 aa8.57□□□□□ -1.04
TRAPPC9-203ENST00000517667 SPRY2O43597 315 aa8.57□□□□□ -1.04
TRAPPC9-203ENST00000517667 PROP1O75360 226 aa8.57□□□□□ -1.04
TRAPPC9-203ENST00000517667 RBMXL2O75526 392 aaKnown RBP8.57□□□□□ -1.04
TRAPPC9-203ENST00000517667 IGLV2-23P01705 113 aa8.57□□□□□ -1.04
TRAPPC9-203ENST00000517667 CRYGBP07316 175 aa8.57□□□□□ -1.04
TRAPPC9-203ENST00000517667 UBBP0CG47 229 aa8.57□□□□□ -1.04
TRAPPC9-203ENST00000517667 APOC4P55056 127 aa8.57□□□□□ -1.04
TRAPPC9-203ENST00000517667 EWSR1Q01844 656 aaKnown RBP eCLIP8.57□□□□□ -1.04
TRAPPC9-203ENST00000517667 TPBGQ13641 420 aa8.57□□□□□ -1.04
TRAPPC9-203ENST00000517667 GLT8D1Q68CQ7 371 aa8.57□□□□□ -1.04
TRAPPC9-203ENST00000517667 C6orf201Q7Z4U5 140 aa8.57□□□□□ -1.04
TRAPPC9-203ENST00000517667 MS4A15Q8N5U1 240 aa8.57□□□□□ -1.04
TRAPPC9-203ENST00000517667 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC9-203ENST00000517667 SETD6Q8TBK2 473 aa8.57□□□□□ -1.04
TRAPPC9-203ENST00000517667 CYYR1Q96J86 154 aa8.57□□□□□ -1.04
TRAPPC9-203ENST00000517667 HARBI1Q96MB7 349 aa8.57□□□□□ -1.04
TRAPPC9-203ENST00000517667 FAAP24Q9BTP7 215 aa8.57□□□□□ -1.04
TRAPPC9-203ENST00000517667 SLC35D1Q9NTN3 355 aa8.57□□□□□ -1.04
TRAPPC9-203ENST00000517667 TRBV5-7A0A0A0MS05 114 aa8.56□□□□□ -1.04
TRAPPC9-203ENST00000517667 TRBV6-6A0A0A6YYG2 114 aa8.56□□□□□ -1.04
TRAPPC9-203ENST00000517667 TRBV9A0A0B4J1U6 114 aa8.56□□□□□ -1.04
TRAPPC9-203ENST00000517667 LOC100506127A0A0U1RQW1 187 aa8.56□□□□□ -1.04
TRAPPC9-203ENST00000517667 MSGN1A6NI15 193 aa8.56□□□□□ -1.04
TRAPPC9-203ENST00000517667 GGCTO75223 188 aaKnown RBP8.56□□□□□ -1.04
TRAPPC9-203ENST00000517667 APELAP0DMC3 54 aa8.56□□□□□ -1.04
TRAPPC9-203ENST00000517667 MAPK3P27361 379 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC9-203ENST00000517667 RPS11P62280 158 aaKnown RBP eCLIP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms