RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 ZNF260Q3ZCT1 412 aa8.19□□□□□ -1.1
PDGFRB-203ENST00000517660 ACTBL2Q562R1 376 aa8.19□□□□□ -1.1
PDGFRB-203ENST00000517660 H1FOOQ8IZA3 346 aaPredicted RBP8.19□□□□□ -1.1
PDGFRB-203ENST00000517660 LFNGQ8NES3 379 aa8.19□□□□□ -1.1
PDGFRB-203ENST00000517660 FAM103A1Q9BTL3 118 aaKnown RBP8.19□□□□□ -1.1
PDGFRB-203ENST00000517660 OR2D2Q9H210 308 aa8.19□□□□□ -1.1
PDGFRB-203ENST00000517660 DAPK2Q9UIK4 370 aa8.19□□□□□ -1.1
PDGFRB-203ENST00000517660 SLC25A17O43808 307 aa8.18□□□□□ -1.1
PDGFRB-203ENST00000517660 SCGNO76038 276 aa8.18□□□□□ -1.1
PDGFRB-203ENST00000517660 IGLV2-23P01705 113 aa8.18□□□□□ -1.1
PDGFRB-203ENST00000517660 CRYGBP07316 175 aa8.18□□□□□ -1.1
PDGFRB-203ENST00000517660 CTXN2P0C2S0 81 aa8.18□□□□□ -1.1
PDGFRB-203ENST00000517660 ECI1P42126 302 aa8.18□□□□□ -1.1
PDGFRB-203ENST00000517660 INSL3P51460 131 aa8.18□□□□□ -1.1
PDGFRB-203ENST00000517660 PITPNAQ00169 270 aa8.18□□□□□ -1.1
PDGFRB-203ENST00000517660 RTL8BQ17RB0 113 aa8.18□□□□□ -1.1
PDGFRB-203ENST00000517660 TMEM177Q53S58 311 aa8.18□□□□□ -1.1
PDGFRB-203ENST00000517660 ASPHD1Q5U4P2 390 aa8.18□□□□□ -1.1
PDGFRB-203ENST00000517660 HACD4Q5VWC8 232 aa8.18□□□□□ -1.1
PDGFRB-203ENST00000517660 GPR141Q7Z602 305 aa8.18□□□□□ -1.1
PDGFRB-203ENST00000517660 BVESQ8NE79 360 aa8.18□□□□□ -1.1
PDGFRB-203ENST00000517660 MUC7Q8TAX7 377 aa8.18□□□□□ -1.1
PDGFRB-203ENST00000517660 DCUN1D4Q92564 292 aa8.18□□□□□ -1.1
PDGFRB-203ENST00000517660 ARPC1AQ92747 370 aa8.18□□□□□ -1.1
PDGFRB-203ENST00000517660 ADTRPQ96IZ2 230 aa8.18□□□□□ -1.1
PDGFRB-203ENST00000517660 RHOVQ96L33 236 aa8.18□□□□□ -1.1
PDGFRB-203ENST00000517660 ST6GALNAC5Q9BVH7 336 aa8.18□□□□□ -1.1
PDGFRB-203ENST00000517660 OR51E2Q9H255 320 aa8.18□□□□□ -1.1
PDGFRB-203ENST00000517660 DCSTAMPQ9H295 470 aa8.18□□□□□ -1.1
PDGFRB-203ENST00000517660 SLA2Q9H6Q3 261 aa8.18□□□□□ -1.1
PDGFRB-203ENST00000517660 ELF5Q9UKW6 265 aaPredicted RBP8.18□□□□□ -1.1
PDGFRB-203ENST00000517660 IGKV1D-8A0A087WSZ0 117 aa8.17□□□□□ -1.1
PDGFRB-203ENST00000517660 LINC01619G3V211 115 aa8.17□□□□□ -1.1
PDGFRB-203ENST00000517660 OVOL1O14753 267 aa8.17□□□□□ -1.1
PDGFRB-203ENST00000517660 ARPC1BO15143 372 aaKnown RBP8.17□□□□□ -1.1
PDGFRB-203ENST00000517660 CNIH1O95406 144 aa8.17□□□□□ -1.1
PDGFRB-203ENST00000517660 LGALS1P09382 135 aaKnown RBP8.17□□□□□ -1.1
PDGFRB-203ENST00000517660 SNRPBP14678 240 aaKnown RBP8.17□□□□□ -1.1
PDGFRB-203ENST00000517660 SDC2P34741 201 aa8.17□□□□□ -1.1
PDGFRB-203ENST00000517660 ALDH3B2P48448 385 aa8.17□□□□□ -1.1
PDGFRB-203ENST00000517660 SFXN4Q6P4A7 337 aa8.17□□□□□ -1.1
PDGFRB-203ENST00000517660 ZNF429Q86V71 674 aa8.17□□□□□ -1.1
PDGFRB-203ENST00000517660 GRPEL2Q8TAA5 225 aa8.17□□□□□ -1.1
PDGFRB-203ENST00000517660 CASTOR1Q8WTX7 329 aa8.17□□□□□ -1.1
PDGFRB-203ENST00000517660 DGCR14Q96DF8 476 aaKnown RBP8.17□□□□□ -1.1
PDGFRB-203ENST00000517660 C5orf30Q96GV9 206 aa8.17□□□□□ -1.1
PDGFRB-203ENST00000517660 HARBI1Q96MB7 349 aa8.17□□□□□ -1.1
PDGFRB-203ENST00000517660 TMEM68Q96MH6 324 aa8.17□□□□□ -1.1
PDGFRB-203ENST00000517660 MS4A10Q96PG2 267 aa8.17□□□□□ -1.1
PDGFRB-203ENST00000517660 ALX4Q9H161 411 aaPredicted RBP8.17□□□□□ -1.1
PDGFRB-203ENST00000517660 TPSG1Q9NRR2 321 aa8.17□□□□□ -1.1
PDGFRB-203ENST00000517660 TRIM64CA6NLI5 447 aa8.16□□□□□ -1.1
PDGFRB-203ENST00000517660 SRRM4A7MD48 611 aaKnown RBP8.16□□□□□ -1.1
PDGFRB-203ENST00000517660 H3BUA1 57 aa8.16□□□□□ -1.1
PDGFRB-203ENST00000517660 SHOXO15266 292 aa8.16□□□□□ -1.1
PDGFRB-203ENST00000517660 NOL3O60936 208 aaKnown RBP8.16□□□□□ -1.1
PDGFRB-203ENST00000517660 IGHV3-11P01762 117 aa8.16□□□□□ -1.1
PDGFRB-203ENST00000517660 TRGV3P03979 118 aa8.16□□□□□ -1.1
PDGFRB-203ENST00000517660 HSPB1P04792 205 aaKnown RBP8.16□□□□□ -1.1
PDGFRB-203ENST00000517660 DUTP33316 252 aaKnown RBP8.16□□□□□ -1.1
PDGFRB-203ENST00000517660 SCAND1P57086 179 aa8.16□□□□□ -1.1
PDGFRB-203ENST00000517660 TPPP2P59282 170 aa8.16□□□□□ -1.1
PDGFRB-203ENST00000517660 GNG2P59768 71 aa8.16□□□□□ -1.1
PDGFRB-203ENST00000517660 PJVKQ0ZLH3 352 aa8.16□□□□□ -1.1
PDGFRB-203ENST00000517660 VMA21Q3ZAQ7 101 aa8.16□□□□□ -1.1
PDGFRB-203ENST00000517660 CNIH2Q6PI25 160 aa8.16□□□□□ -1.1
PDGFRB-203ENST00000517660 TEX45Q8NA69 505 aa8.16□□□□□ -1.1
PDGFRB-203ENST00000517660 POC5Q8NA72 575 aa8.16□□□□□ -1.1
PDGFRB-203ENST00000517660 OR5T1Q8NG75 326 aa8.16□□□□□ -1.1
PDGFRB-203ENST00000517660 ALMS1Q8TCU4 4167 aa8.16□□□□□ -1.1
PDGFRB-203ENST00000517660 DDB2Q92466 427 aa8.16□□□□□ -1.1
PDGFRB-203ENST00000517660 DLX4Q92988 240 aaPredicted RBP8.16□□□□□ -1.1
PDGFRB-203ENST00000517660 PRR25Q96S07 402 aa8.16□□□□□ -1.1
PDGFRB-203ENST00000517660 ZNF355PQ9NSJ1 428 aa8.16□□□□□ -1.1
PDGFRB-203ENST00000517660 ZNF256Q9Y2P7 627 aaPredicted RBP8.16□□□□□ -1.1
PDGFRB-203ENST00000517660 OR2W1Q9Y3N9 320 aa8.16□□□□□ -1.1
PDGFRB-203ENST00000517660 LSM4Q9Y4Z0 139 aaKnown RBP8.16□□□□□ -1.1
PDGFRB-203ENST00000517660 IGHV4OR15-8A0A075B7B6 117 aa8.15□□□□□ -1.1
PDGFRB-203ENST00000517660 A0A087WW49 117 aa8.15□□□□□ -1.1
PDGFRB-203ENST00000517660 A0A0G2JLM5 398 aa8.15□□□□□ -1.1
PDGFRB-203ENST00000517660 LOC100506127A0A0U1RQW1 187 aa8.15□□□□□ -1.1
PDGFRB-203ENST00000517660 TMEM235A6NFC5 223 aa8.15□□□□□ -1.1
PDGFRB-203ENST00000517660 J3QRK9 145 aa8.15□□□□□ -1.1
PDGFRB-203ENST00000517660 SLC22A5O76082 557 aa8.15□□□□□ -1.1
PDGFRB-203ENST00000517660 BRI3O95415 125 aa8.15□□□□□ -1.1
PDGFRB-203ENST00000517660 HLA-DQB1P01920 261 aa8.15□□□□□ -1.1
PDGFRB-203ENST00000517660 CLEC2LP0C7M8 214 aa8.15□□□□□ -1.1
PDGFRB-203ENST00000517660 NHLRC4P0CG21 123 aaPredicted RBP8.15□□□□□ -1.1
PDGFRB-203ENST00000517660 CD36P16671 472 aa8.15□□□□□ -1.1
PDGFRB-203ENST00000517660 SLURP1P55000 103 aa8.15□□□□□ -1.1
PDGFRB-203ENST00000517660 UBE2KP61086 200 aa8.15□□□□□ -1.1
PDGFRB-203ENST00000517660 SSBP2P81877 361 aaPredicted RBP8.15□□□□□ -1.1
PDGFRB-203ENST00000517660 MXD1Q05195 221 aa8.15□□□□□ -1.1
PDGFRB-203ENST00000517660 NEDD8Q15843 81 aa8.15□□□□□ -1.1
PDGFRB-203ENST00000517660 ZNF645Q8N7E2 425 aa8.15□□□□□ -1.1
PDGFRB-203ENST00000517660 OSR1Q8TAX0 266 aaPredicted RBP8.15□□□□□ -1.1
PDGFRB-203ENST00000517660 LGALS14Q8TCE9 139 aa8.15□□□□□ -1.1
PDGFRB-203ENST00000517660 NUDCD2Q8WVJ2 157 aa8.15□□□□□ -1.1
PDGFRB-203ENST00000517660 RBM38Q9H0Z9 239 aaKnown RBP8.15□□□□□ -1.1
PDGFRB-203ENST00000517660 RHBDL2Q9NX52 303 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms