RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 PIH1D2Q8WWB5 315 aa-3.5□□□□□ -2.97
RNU6-539P-201ENST00000516665 RNASE6Q93091 150 aaKnown RBP-3.5□□□□□ -2.97
RNU6-539P-201ENST00000516665 RCN3Q96D15 328 aa-3.5□□□□□ -2.97
RNU6-539P-201ENST00000516665 AGMATQ9BSE5 352 aa-3.5□□□□□ -2.97
RNU6-539P-201ENST00000516665 LIN28AQ9H9Z2 209 aaKnown RBP-3.5□□□□□ -2.97
RNU6-539P-201ENST00000516665 MID1IP1Q9NPA3 183 aa-3.5□□□□□ -2.97
RNU6-539P-201ENST00000516665 NMRK1Q9NWW6 199 aa-3.5□□□□□ -2.97
RNU6-539P-201ENST00000516665 TAS2R7Q9NYW3 318 aa-3.5□□□□□ -2.97
RNU6-539P-201ENST00000516665 ACACAQ13085 2346 aa-3.5□□□□□ -2.97
RNU6-539P-201ENST00000516665 IQSEC2Q5JU85 1478 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 BCL9LQ86UU0 1499 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 TCL1BO95988 128 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 NMBP08949 121 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 IL10P22301 178 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 IVDP26440 423 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 CRYBB2P43320 205 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 MP68P56378 58 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 CAV3P56539 151 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 FXYD7P58549 80 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 TAS2R45P59539 299 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 GABARAPL2P60520 117 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 DEFA5Q01523 94 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 RPL18AQ02543 176 aaKnown RBP-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 SELENBP1Q13228 472 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 SCARB2Q14108 478 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 RCN1Q15293 331 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 TOMM20Q15388 145 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 RNASE10Q5GAN6 216 aaKnown RBP-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 C10orf53Q8N6V4 93 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 GATD1Q8NB37 220 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 OR9G4Q8NGQ1 327 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 AKR7LQ8NHP1 331 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 TMEM239Q8WW34 195 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 TUBGCP3Q96CW5 907 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 SFRP2Q96HF1 295 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 C16orf45Q96MC5 204 aaPredicted RBP-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 OR2M4Q96R27 311 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 HINT2Q9BX68 163 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 PTTG3PQ9NZH4 202 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 PTPRDP23468 1912 aa-3.51□□□□□ -2.97
RNU6-539P-201ENST00000516665 CECR2Q9BXF3 1484 aa-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 IGHV2OR16-5A0A0B4J2B6 119 aa-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 TOX3O15405 576 aaPredicted RBP-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 UBL3O95164 117 aa-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 CD160O95971 181 aa-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 MSNP26038 577 aaKnown RBP-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 RHOAP61586 193 aa-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 FGL1Q08830 312 aa-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 OR4D1Q15615 310 aa-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 CASC2Q6XLA1 102 aa-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 Q6ZQT0 140 aa-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 BAP18Q8IXM2 172 aa-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 ST6GALNAC3Q8NDV1 305 aa-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 WFDC11Q8NEX6 87 aa-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 OR5L1Q8NGL2 311 aa-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 OR13C8Q8NGS7 320 aa-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 OR10Z1Q8NGY1 313 aa-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 TBC1D31Q96DN5 1066 aa-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 PRR15LQ9BU68 103 aa-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 CNFNQ9BYD5 112 aa-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 NKX6-2Q9C056 277 aaPredicted RBP-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 OR2AG1Q9H205 316 aa-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 CLSTN2Q9H4D0 955 aa-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 ANKRA2Q9H9E1 313 aa-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 GRPEL1Q9HAV7 217 aa-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 DDIT4Q9NX09 232 aa-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 DYNC1H1Q14204 4646 aaKnown RBP-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 A0A0C4DFX4 3053 aa-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 CHD5Q8TDI0 1954 aa-3.52□□□□□ -2.97
RNU6-539P-201ENST00000516665 H3BSA7 217 aa-3.53□□□□□ -2.97
RNU6-539P-201ENST00000516665 FGF16O43320 207 aa-3.53□□□□□ -2.97
RNU6-539P-201ENST00000516665 ATP6V1C1P21283 382 aa-3.53□□□□□ -2.97
RNU6-539P-201ENST00000516665 SSR1P43307 286 aaKnown RBP-3.53□□□□□ -2.97
RNU6-539P-201ENST00000516665 TRMT5Q32P41 509 aaKnown RBP-3.53□□□□□ -2.97
RNU6-539P-201ENST00000516665 TBC1D19Q8N5T2 526 aa-3.53□□□□□ -2.97
RNU6-539P-201ENST00000516665 CASTOR1Q8WTX7 329 aa-3.53□□□□□ -2.97
RNU6-539P-201ENST00000516665 OPTNQ96CV9 577 aa-3.53□□□□□ -2.97
RNU6-539P-201ENST00000516665 ERP27Q96DN0 273 aa-3.53□□□□□ -2.97
RNU6-539P-201ENST00000516665 LYSMD1Q96S90 227 aa-3.53□□□□□ -2.97
RNU6-539P-201ENST00000516665 MAT2BQ9NZL9 334 aa-3.53□□□□□ -2.97
RNU6-539P-201ENST00000516665 TIMM22Q9Y584 194 aa-3.53□□□□□ -2.97
RNU6-539P-201ENST00000516665 A0A096LNT2 108 aa-3.54□□□□□ -2.98
RNU6-539P-201ENST00000516665 PRORSD1PA6NEY8 169 aa-3.54□□□□□ -2.98
RNU6-539P-201ENST00000516665 H7BYZ3 331 aa-3.54□□□□□ -2.98
RNU6-539P-201ENST00000516665 BCKDKO14874 412 aa-3.54□□□□□ -2.98
RNU6-539P-201ENST00000516665 MSMBP08118 114 aa-3.54□□□□□ -2.98
RNU6-539P-201ENST00000516665 SPI1P17947 270 aa-3.54□□□□□ -2.98
RNU6-539P-201ENST00000516665 CDK2P24941 298 aa-3.54□□□□□ -2.98
RNU6-539P-201ENST00000516665 DAPP51397 102 aa-3.54□□□□□ -2.98
RNU6-539P-201ENST00000516665 C6orf226Q5I0X4 101 aa-3.54□□□□□ -2.98
RNU6-539P-201ENST00000516665 NT5CQ8TCD5 201 aa-3.54□□□□□ -2.98
RNU6-539P-201ENST00000516665 LINC00052Q96N35 136 aa-3.54□□□□□ -2.98
RNU6-539P-201ENST00000516665 FARSBQ9NSD9 589 aaKnown RBP-3.54□□□□□ -2.98
RNU6-539P-201ENST00000516665 ORMDL1Q9P0S3 153 aa-3.54□□□□□ -2.98
RNU6-539P-201ENST00000516665 BICRAQ9NZM4 1560 aa-3.55□□□□□ -2.98
RNU6-539P-201ENST00000516665 DNAJC13O75165 2243 aa-3.55□□□□□ -2.98
RNU6-539P-201ENST00000516665 TRBV9A0A0B4J1U6 114 aa-3.55□□□□□ -2.98
RNU6-539P-201ENST00000516665 JMJD7-PLA2G4BH0Y9G9 81 aa-3.55□□□□□ -2.98
RNU6-539P-201ENST00000516665 NDUFAB1O14561 156 aa-3.55□□□□□ -2.98
RNU6-539P-201ENST00000516665 PPYP01298 95 aa-3.55□□□□□ -2.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms