RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 CYTL1Q9NRR1 136 aa16.46■□□□□ 0.23
TRIO-223ENST00000515710 hCG_1809904A0A1W2PP81 198 aa16.45■□□□□ 0.22
TRIO-223ENST00000515710 A0A1W2PPE2 198 aa16.45■□□□□ 0.22
TRIO-223ENST00000515710 A0A1W2PR64 198 aa16.45■□□□□ 0.22
TRIO-223ENST00000515710 A0A1W2PRV1 198 aa16.45■□□□□ 0.22
TRIO-223ENST00000515710 CHST1O43916 411 aa16.45■□□□□ 0.22
TRIO-223ENST00000515710 SSSCA1O60232 199 aa16.45■□□□□ 0.22
TRIO-223ENST00000515710 FAM71F2Q6NXP2 309 aa16.45■□□□□ 0.22
TRIO-223ENST00000515710 OR2C3Q8N628 320 aa16.45■□□□□ 0.22
TRIO-223ENST00000515710 TNFRSF14Q92956 283 aa16.45■□□□□ 0.22
TRIO-223ENST00000515710 PHYHIPLQ96FC7 376 aa16.45■□□□□ 0.22
TRIO-223ENST00000515710 RAB40CQ96S21 281 aa16.45■□□□□ 0.22
TRIO-223ENST00000515710 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.45■□□□□ 0.22
TRIO-223ENST00000515710 SPTBN1Q01082 2364 aaKnown RBP16.45■□□□□ 0.22
TRIO-223ENST00000515710 LIPFP07098 398 aa16.45■□□□□ 0.22
TRIO-223ENST00000515710 EIF5AP63241 154 aaKnown RBP16.45■□□□□ 0.22
TRIO-223ENST00000515710 MIDNQ504T8 468 aa16.45■□□□□ 0.22
TRIO-223ENST00000515710 HSD17B13Q7Z5P4 300 aaPredicted RBP16.45■□□□□ 0.22
TRIO-223ENST00000515710 ABHD12Q8N2K0 398 aa16.45■□□□□ 0.22
TRIO-223ENST00000515710 TMEM186Q96B77 213 aa16.45■□□□□ 0.22
TRIO-223ENST00000515710 SLC25A31Q9H0C2 315 aa16.45■□□□□ 0.22
TRIO-223ENST00000515710 MARCH11A6NNE9 402 aa16.44■□□□□ 0.22
TRIO-223ENST00000515710 FAM90A9PA6NNJ1 464 aa16.44■□□□□ 0.22
TRIO-223ENST00000515710 TPT1P13693 172 aaKnown RBP16.44■□□□□ 0.22
TRIO-223ENST00000515710 SRSF1Q07955 248 aaKnown RBP eCLIP16.44■□□□□ 0.22
TRIO-223ENST00000515710 ZNF383Q8NA42 475 aa16.44■□□□□ 0.22
TRIO-223ENST00000515710 OR10X1Q8NGY0 326 aa16.44■□□□□ 0.22
TRIO-223ENST00000515710 SSBP3Q9BWW4 388 aaPredicted RBP16.44■□□□□ 0.22
TRIO-223ENST00000515710 SYNGR2O43760 224 aa16.43■□□□□ 0.22
TRIO-223ENST00000515710 CT45A6P0DMU7 189 aa16.43■□□□□ 0.22
TRIO-223ENST00000515710 CT45A5P0DMU8 189 aa16.43■□□□□ 0.22
TRIO-223ENST00000515710 CT45A7P0DMV0 189 aa16.43■□□□□ 0.22
TRIO-223ENST00000515710 NQO2P16083 231 aa16.43■□□□□ 0.22
TRIO-223ENST00000515710 ERVK-16P61578 105 aa16.43■□□□□ 0.22
TRIO-223ENST00000515710 ALKAL2Q6UX46 152 aa16.43■□□□□ 0.22
TRIO-223ENST00000515710 LINC00052Q96N35 136 aa16.43■□□□□ 0.22
TRIO-223ENST00000515710 LYRM2Q9NU23 88 aaPredicted RBP16.43■□□□□ 0.22
TRIO-223ENST00000515710 ZMAT5Q9UDW3 170 aaKnown RBP16.43■□□□□ 0.22
TRIO-223ENST00000515710 MED6O75586 246 aa16.43■□□□□ 0.22
TRIO-223ENST00000515710 NXPH3O95157 252 aa16.43■□□□□ 0.22
TRIO-223ENST00000515710 FGF2P09038 288 aa16.43■□□□□ 0.22
TRIO-223ENST00000515710 RPL23AP62750 156 aaKnown RBP16.43■□□□□ 0.22
TRIO-223ENST00000515710 S100A12P80511 92 aa16.43■□□□□ 0.22
TRIO-223ENST00000515710 FLI1Q01543 452 aaPredicted RBP16.43■□□□□ 0.22
TRIO-223ENST00000515710 BTN1A1Q13410 526 aa16.43■□□□□ 0.22
TRIO-223ENST00000515710 ZNRD1Q9P1U0 126 aa16.43■□□□□ 0.22
TRIO-223ENST00000515710 LOC105371242A0A075B767 164 aa16.42■□□□□ 0.22
TRIO-223ENST00000515710 FAM24AA6NFZ4 105 aa16.42■□□□□ 0.22
TRIO-223ENST00000515710 ZNF137PP52743 207 aa16.42■□□□□ 0.22
TRIO-223ENST00000515710 PRRX1P54821 245 aa16.42■□□□□ 0.22
TRIO-223ENST00000515710 PAX9P55771 341 aa16.42■□□□□ 0.22
TRIO-223ENST00000515710 TUSC1Q2TAM9 212 aa16.42■□□□□ 0.22
TRIO-223ENST00000515710 DHRS7BQ6IAN0 325 aaPredicted RBP16.42■□□□□ 0.22
TRIO-223ENST00000515710 LURAP1LQ8IV03 231 aa16.42■□□□□ 0.22
TRIO-223ENST00000515710 BAP18Q8IXM2 172 aa16.42■□□□□ 0.22
TRIO-223ENST00000515710 CCL19Q99731 98 aa16.42■□□□□ 0.22
TRIO-223ENST00000515710 HSPB7Q9UBY9 170 aa16.42■□□□□ 0.22
TRIO-223ENST00000515710 FBXL17Q9UF56 701 aa16.42■□□□□ 0.22
TRIO-223ENST00000515710 YLPM1P49750 1951 aaKnown RBP16.42■□□□□ 0.22
TRIO-223ENST00000515710 GAPDHP04406 335 aaKnown RBP16.41■□□□□ 0.22
TRIO-223ENST00000515710 IL3RAP26951 378 aa16.41■□□□□ 0.22
TRIO-223ENST00000515710 CAV2P51636 162 aa16.41■□□□□ 0.22
TRIO-223ENST00000515710 TAS2R30P59541 319 aa16.41■□□□□ 0.22
TRIO-223ENST00000515710 EWSR1Q01844 656 aaKnown RBP eCLIP16.41■□□□□ 0.22
TRIO-223ENST00000515710 TMEM252Q8N6L7 170 aa16.41■□□□□ 0.22
TRIO-223ENST00000515710 WSB1Q9Y6I7 421 aa16.41■□□□□ 0.22
TRIO-223ENST00000515710 C22orf46C9J442 243 aa16.41■□□□□ 0.22
TRIO-223ENST00000515710 JTBO76095 146 aa16.41■□□□□ 0.22
TRIO-223ENST00000515710 TMEM50AO95807 157 aa16.41■□□□□ 0.22
TRIO-223ENST00000515710 PDLIM4P50479 330 aa16.41■□□□□ 0.22
TRIO-223ENST00000515710 TNFRSF9Q07011 255 aa16.41■□□□□ 0.22
TRIO-223ENST00000515710 RTL8BQ17RB0 113 aa16.41■□□□□ 0.22
TRIO-223ENST00000515710 ST6GALNAC6Q969X2 333 aa16.41■□□□□ 0.22
TRIO-223ENST00000515710 MARC2Q969Z3 335 aa16.41■□□□□ 0.22
TRIO-223ENST00000515710 SMIM8Q96KF7 97 aa16.41■□□□□ 0.22
TRIO-223ENST00000515710 SLC35D1Q9NTN3 355 aa16.41■□□□□ 0.22
TRIO-223ENST00000515710 SMG1Q96Q15 3661 aaKnown RBP16.4■□□□□ 0.22
TRIO-223ENST00000515710 CFAP46Q8IYW2 2715 aa16.4■□□□□ 0.22
TRIO-223ENST00000515710 NMBP08949 121 aa16.4■□□□□ 0.22
TRIO-223ENST00000515710 UBE2KP61086 200 aa16.4■□□□□ 0.22
TRIO-223ENST00000515710 BAXQ07812 192 aa16.4■□□□□ 0.22
TRIO-223ENST00000515710 SP5Q6BEB4 398 aaPredicted RBP16.4■□□□□ 0.22
TRIO-223ENST00000515710 CACFD1Q9UGQ2 172 aa16.4■□□□□ 0.22
TRIO-223ENST00000515710 IGHV2-26A0A0B4J1V2 119 aa16.39■□□□□ 0.21
TRIO-223ENST00000515710 IGSF23A1L1A6 192 aa16.39■□□□□ 0.21
TRIO-223ENST00000515710 M0R1W7 72 aa16.39■□□□□ 0.21
TRIO-223ENST00000515710 HRASP01112 189 aa16.39■□□□□ 0.21
TRIO-223ENST00000515710 APOA2P02652 100 aa16.39■□□□□ 0.21
TRIO-223ENST00000515710 COX6B1P14854 86 aa16.39■□□□□ 0.21
TRIO-223ENST00000515710 NHLH2Q02577 135 aa16.39■□□□□ 0.21
TRIO-223ENST00000515710 POU2AF1Q16633 256 aa16.39■□□□□ 0.21
TRIO-223ENST00000515710 CLEC7AQ9BXN2 247 aa16.39■□□□□ 0.21
TRIO-223ENST00000515710 ONECUT1Q9UBC0 465 aa16.39■□□□□ 0.21
TRIO-223ENST00000515710 PFDN2Q9UHV9 154 aa16.39■□□□□ 0.21
TRIO-223ENST00000515710 IGHV2-5P01817 119 aa16.39■□□□□ 0.21
TRIO-223ENST00000515710 IGHV4-39P01824 125 aa16.39■□□□□ 0.21
TRIO-223ENST00000515710 AARDQ4LEZ3 155 aa16.39■□□□□ 0.21
TRIO-223ENST00000515710 RPL7L1Q6DKI1 246 aaKnown RBP16.39■□□□□ 0.21
TRIO-223ENST00000515710 ZNF525Q8N782 197 aa16.39■□□□□ 0.21
TRIO-223ENST00000515710 BEND2Q8NDZ0 799 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms