RNA–Protein interactions for RNA: ENST00000515629.5

SLC38A9-223, Transcript of solute carrier family 38 member 9, human

TSL 2 BASIC

Gene SLC38A9, Length 2,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC38A9-223	ENST00000515629	ZCCHC24	Q8N2G6	241 aa	Known RBP	3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	C11orf42	Q8N5U0	333 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	ACBD7	Q8N6N7	88 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	GDPD1	Q8N9F7	314 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	OR5W2	Q8NH69	310 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	FNDC9	Q8TBE3	224 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	ORAOV1	Q8WV07	137 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	TMEM159	Q96B96	161 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	MBD6	Q96DN6	1003 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	ACY3	Q96HD9	319 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	C2orf48	Q96LS8	159 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	MCHR1	Q99705	422 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	SSBP3	Q9BWW4	388 aa	Predicted RBP	3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	GNB1L	Q9BYB4	327 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	OR51I2	Q9H344	312 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	PTGES2	Q9H7Z7	377 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	HES4	Q9HCC6	221 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	SIX2	Q9NPC8	291 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	VAX2	Q9UIW0	290 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	CSMD1	Q96PZ7	3565 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	ITPR2	Q14571	2701 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	LOC100130705	A0A1B0GUX0	176 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629		A8MWP6	167 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629		B4DXG7	233 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	INMT-MINDY4	F8WBC2	141 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629		J3QT63	122 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	SPAG7	O75391	227 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	CRLF1	O75462	422 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	REM1	O75628	298 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	GADD45G	O95257	159 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	TNF	P01375	233 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	CSN2	P05814	226 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	SNRPC	P09234	159 aa	Known RBP	3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	ORM2	P19652	201 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	NTF3	P20783	257 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	RPS3	P23396	243 aa	Known RBP eCLIP	3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	CDK2	P24941	298 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	CACNG7	P62955	275 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	FCN2	Q15485	313 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	GSG1	Q2KHT4	349 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	PABPC1L2A	Q5JQF8	200 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	DGAT2L6	Q6ZPD8	337 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	CEACAM19	Q7Z692	300 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	OR2A1	Q8NGT9	310 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	APOBEC4	Q8WW27	367 aa	Known RBP	3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	PATE1	Q8WXA2	126 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	TMEM54	Q969K7	222 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	LYSMD1	Q96S90	227 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	TMEM222	Q9H0R3	208 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	ZNF556	Q9HAH1	456 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	ZNF71	Q9NQZ8	489 aa	Predicted RBP	3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	MRPL16	Q9NX20	251 aa	Known RBP	3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	RIMS3	Q9UJD0	308 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	HIVEP3	Q5T1R4	2406 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	FER1L5	A0AVI2	2057 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	PHF3	Q92576	2039 aa	Known RBP	3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	ESPL1	Q14674	2120 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	BORCS7-ASMT	A0A0B4J1R7	106 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	IGHV5-10-1	A0A0J9YXX1	117 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	LOC100131303	A0A0U1RQF7	123 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629		A0A1B0GW64	132 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	FABP3	P05413	133 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	TNFRSF1B	P20333	461 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	RAB3B	P20337	219 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	MIP	P30301	263 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	KIR2DS2	P43631	304 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	ZNF92	Q03936	586 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	RGN	Q15493	299 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	ZNF767P	Q75MW2	155 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	CROCCP2	Q86T23	111 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	C17orf82	Q86X59	251 aa	Predicted RBP	3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	EXOC3-AS1	Q8N2X6	119 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	TMEM178A	Q8NBL3	297 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	GPR26	Q8NDV2	337 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	OSR1	Q8TAX0	266 aa	Predicted RBP	3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	LRRC29	Q8WV35	223 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	SECTM1	Q8WVN6	248 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	ISOC1	Q96CN7	298 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	KRTAP17-1	Q9BYP8	105 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	OR2J1	Q9GZK6	312 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	SH3BGRL3	Q9H299	93 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	OR52D1	Q9H346	318 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	ZNF257	Q9Y2Q1	563 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	UGT2A1	Q9Y4X1	527 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	HSPE1-MOB4	S4R3N1	261 aa		3.37	□□□□□ -1.87
SLC38A9-223	ENST00000515629	ABCA12	Q86UK0	2595 aa		3.36	□□□□□ -1.87
SLC38A9-223	ENST00000515629	DUXB	A0A1W2PPF3	345 aa		3.36	□□□□□ -1.87
SLC38A9-223	ENST00000515629	FABP5P3	A8MUU1	101 aa		3.36	□□□□□ -1.87
SLC38A9-223	ENST00000515629	ZNF814	B7Z6K7	855 aa		3.36	□□□□□ -1.87
SLC38A9-223	ENST00000515629		C9JAW5	83 aa		3.36	□□□□□ -1.87
SLC38A9-223	ENST00000515629	CLDN25	C9JDP6	229 aa		3.36	□□□□□ -1.87
SLC38A9-223	ENST00000515629	AIFM1	O95831	613 aa		3.36	□□□□□ -1.87
SLC38A9-223	ENST00000515629	CELA2A	P08217	269 aa		3.36	□□□□□ -1.87
SLC38A9-223	ENST00000515629	BLVRB	P30043	206 aa	Predicted RBP	3.36	□□□□□ -1.87
SLC38A9-223	ENST00000515629	RND3	P61587	244 aa		3.36	□□□□□ -1.87
SLC38A9-223	ENST00000515629	RPS28	P62857	69 aa	Known RBP	3.36	□□□□□ -1.87
SLC38A9-223	ENST00000515629	HBG1	P69891	147 aa		3.36	□□□□□ -1.87
SLC38A9-223	ENST00000515629	HBG2	P69892	147 aa		3.36	□□□□□ -1.87
SLC38A9-223	ENST00000515629	HOXA4	Q00056	320 aa	Predicted RBP	3.36	□□□□□ -1.87
SLC38A9-223	ENST00000515629	MEST	Q5EB52	335 aa		3.36	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms