RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 DNAH2Q9P225 4427 aa7.72□□□□□ -1.17
CLDND1-231ENST00000515620 TRAV25A0A0B4J276 109 aa7.72□□□□□ -1.17
CLDND1-231ENST00000515620 SNTNA6NMZ2 147 aa7.72□□□□□ -1.17
CLDND1-231ENST00000515620 SRRM4A7MD48 611 aaKnown RBP7.72□□□□□ -1.17
CLDND1-231ENST00000515620 DEFB4AO15263 64 aa7.72□□□□□ -1.17
CLDND1-231ENST00000515620 SHOXO15266 292 aa7.72□□□□□ -1.17
CLDND1-231ENST00000515620 ZBTB25P24278 435 aa7.72□□□□□ -1.17
CLDND1-231ENST00000515620 MFAP2P55001 183 aa7.72□□□□□ -1.17
CLDND1-231ENST00000515620 CBX3Q13185 183 aa7.72□□□□□ -1.17
CLDND1-231ENST00000515620 PRSS8Q16651 343 aa7.72□□□□□ -1.17
CLDND1-231ENST00000515620 FAM106AQ4KMX7 169 aa7.72□□□□□ -1.17
CLDND1-231ENST00000515620 TMEM177Q53S58 311 aa7.72□□□□□ -1.17
CLDND1-231ENST00000515620 IDO2Q6ZQW0 420 aa7.72□□□□□ -1.17
CLDND1-231ENST00000515620 MOB1BQ7L9L4 216 aa7.72□□□□□ -1.17
CLDND1-231ENST00000515620 C6orf201Q7Z4U5 140 aa7.72□□□□□ -1.17
CLDND1-231ENST00000515620 CCDC140Q96MF4 163 aa7.72□□□□□ -1.17
CLDND1-231ENST00000515620 RARRES2Q99969 163 aa7.72□□□□□ -1.17
CLDND1-231ENST00000515620 MAP6D1Q9H9H5 199 aa7.72□□□□□ -1.17
CLDND1-231ENST00000515620 POMPQ9Y244 141 aa7.72□□□□□ -1.17
CLDND1-231ENST00000515620 DNAH11Q96DT5 4516 aa7.71□□□□□ -1.17
CLDND1-231ENST00000515620 DNAH6Q9C0G6 4158 aa7.71□□□□□ -1.18
CLDND1-231ENST00000515620 M0R2N4 97 aa7.71□□□□□ -1.18
CLDND1-231ENST00000515620 NAPSAO96009 420 aa7.71□□□□□ -1.18
CLDND1-231ENST00000515620 ODF3L2Q3SX64 289 aa7.71□□□□□ -1.18
CLDND1-231ENST00000515620 ZNF585BQ52M93 769 aa7.71□□□□□ -1.18
CLDND1-231ENST00000515620 C10orf55Q5SWW7 151 aa7.71□□□□□ -1.18
CLDND1-231ENST00000515620 OR4A47Q6IF82 309 aa7.71□□□□□ -1.18
CLDND1-231ENST00000515620 RPL22L1Q6P5R6 122 aaKnown RBP7.71□□□□□ -1.18
CLDND1-231ENST00000515620 ZNF880Q6PDB4 577 aa7.71□□□□□ -1.18
CLDND1-231ENST00000515620 CLEC19AQ6UXS0 136 aa7.71□□□□□ -1.18
CLDND1-231ENST00000515620 C19orf35Q6ZS72 473 aa7.71□□□□□ -1.18
CLDND1-231ENST00000515620 OR5B3Q8NH48 314 aa7.71□□□□□ -1.18
CLDND1-231ENST00000515620 PTX4Q96A99 478 aa7.71□□□□□ -1.18
CLDND1-231ENST00000515620 SPAG8Q99932 426 aaPredicted RBP7.71□□□□□ -1.18
CLDND1-231ENST00000515620 AMBNQ9NP70 447 aa7.71□□□□□ -1.18
CLDND1-231ENST00000515620 MED4Q9NPJ6 270 aa7.71□□□□□ -1.18
CLDND1-231ENST00000515620 OAZ3Q9UMX2 235 aa7.71□□□□□ -1.18
CLDND1-231ENST00000515620 TRBV5-5A0A0J9YX44 114 aa7.7□□□□□ -1.18
CLDND1-231ENST00000515620 HLA-DRB3P79483 266 aa7.7□□□□□ -1.18
CLDND1-231ENST00000515620 RTL8BQ17RB0 113 aa7.7□□□□□ -1.18
CLDND1-231ENST00000515620 VMA21Q3ZAQ7 101 aa7.7□□□□□ -1.18
CLDND1-231ENST00000515620 CCDC58Q4VC31 144 aa7.7□□□□□ -1.18
CLDND1-231ENST00000515620 GLT8D1Q68CQ7 371 aa7.7□□□□□ -1.18
CLDND1-231ENST00000515620 UNQ9165/PRO28630Q6UXU0 137 aa7.7□□□□□ -1.18
CLDND1-231ENST00000515620 TTC9CQ8N5M4 171 aa7.7□□□□□ -1.18
CLDND1-231ENST00000515620 MAPKAPK5-AS1Q8N8E1 139 aa7.7□□□□□ -1.18
CLDND1-231ENST00000515620 OR52I1Q8NGK6 324 aa7.7□□□□□ -1.18
CLDND1-231ENST00000515620 OR11H2Q8NH07 326 aa7.7□□□□□ -1.18
CLDND1-231ENST00000515620 GALNT14Q96FL9 552 aa7.7□□□□□ -1.18
CLDND1-231ENST00000515620 SPIN2AQ99865 258 aa7.7□□□□□ -1.18
CLDND1-231ENST00000515620 SPIN2BQ9BPZ2 258 aa7.7□□□□□ -1.18
CLDND1-231ENST00000515620 A0A1W2PPK0 400 aa7.69□□□□□ -1.18
CLDND1-231ENST00000515620 SAC3D1A6NKF1 404 aa7.69□□□□□ -1.18
CLDND1-231ENST00000515620 DYNC1I1O14576 645 aa7.69□□□□□ -1.18
CLDND1-231ENST00000515620 ACTL6BO94805 426 aa7.69□□□□□ -1.18
CLDND1-231ENST00000515620 SCTP09683 121 aa7.69□□□□□ -1.18
CLDND1-231ENST00000515620 LIMS3P0CW19 117 aa7.69□□□□□ -1.18
CLDND1-231ENST00000515620 LIMS4P0CW20 117 aa7.69□□□□□ -1.18
CLDND1-231ENST00000515620 UBE2KP61086 200 aa7.69□□□□□ -1.18
CLDND1-231ENST00000515620 GNGT1P63211 74 aa7.69□□□□□ -1.18
CLDND1-231ENST00000515620 TAGLNQ01995 201 aaKnown RBP7.69□□□□□ -1.18
CLDND1-231ENST00000515620 Q499Y3 187 aa7.69□□□□□ -1.18
CLDND1-231ENST00000515620 TEX45Q8NA69 505 aa7.69□□□□□ -1.18
CLDND1-231ENST00000515620 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.69□□□□□ -1.18
CLDND1-231ENST00000515620 CD300LFQ8TDQ1 290 aa7.69□□□□□ -1.18
CLDND1-231ENST00000515620 MARC2Q969Z3 335 aa7.69□□□□□ -1.18
CLDND1-231ENST00000515620 SMIM19Q96E16 107 aa7.69□□□□□ -1.18
CLDND1-231ENST00000515620 HDHD3Q9BSH5 251 aaPredicted RBP7.69□□□□□ -1.18
CLDND1-231ENST00000515620 OR2D2Q9H210 308 aa7.69□□□□□ -1.18
CLDND1-231ENST00000515620 ZNF430Q9H8G1 570 aaPredicted RBP7.69□□□□□ -1.18
CLDND1-231ENST00000515620 ZNF257Q9Y2Q1 563 aa7.69□□□□□ -1.18
CLDND1-231ENST00000515620 DYNC1H1Q14204 4646 aaKnown RBP7.68□□□□□ -1.18
CLDND1-231ENST00000515620 IGHV4-4A0A075B6R2 117 aa7.68□□□□□ -1.18
CLDND1-231ENST00000515620 IGHV3-35A0A0C4DH35 117 aa7.68□□□□□ -1.18
CLDND1-231ENST00000515620 HMX3A6NHT5 357 aa7.68□□□□□ -1.18
CLDND1-231ENST00000515620 MPTX1A8MV57 137 aa7.68□□□□□ -1.18
CLDND1-231ENST00000515620 C11orf94C9JXX5 98 aa7.68□□□□□ -1.18
CLDND1-231ENST00000515620 TSPAN4O14817 238 aa7.68□□□□□ -1.18
CLDND1-231ENST00000515620 CRYZL1O95825 349 aa7.68□□□□□ -1.18
CLDND1-231ENST00000515620 C8orf88P0DMB2 117 aa7.68□□□□□ -1.18
CLDND1-231ENST00000515620 HTR2CP28335 458 aa7.68□□□□□ -1.18
CLDND1-231ENST00000515620 MED21Q13503 144 aa7.68□□□□□ -1.18
CLDND1-231ENST00000515620 OR2G6Q5TZ20 316 aa7.68□□□□□ -1.18
CLDND1-231ENST00000515620 OR10K2Q6IF99 312 aa7.68□□□□□ -1.18
CLDND1-231ENST00000515620 CEACAM19Q7Z692 300 aa7.68□□□□□ -1.18
CLDND1-231ENST00000515620 SLC25A42Q86VD7 318 aa7.68□□□□□ -1.18
CLDND1-231ENST00000515620 APRG1Q8IVJ8 170 aa7.68□□□□□ -1.18
CLDND1-231ENST00000515620 CDH26Q8IXH8 852 aa7.68□□□□□ -1.18
CLDND1-231ENST00000515620 ZNF645Q8N7E2 425 aa7.68□□□□□ -1.18
CLDND1-231ENST00000515620 C5orf30Q96GV9 206 aa7.68□□□□□ -1.18
CLDND1-231ENST00000515620 NICN1Q9BSH3 213 aa7.68□□□□□ -1.18
CLDND1-231ENST00000515620 C6orf62Q9GZU0 229 aaPredicted RBP7.68□□□□□ -1.18
CLDND1-231ENST00000515620 CSTL1Q9H114 145 aa7.68□□□□□ -1.18
CLDND1-231ENST00000515620 C5orf66Q9H5L9 145 aa7.68□□□□□ -1.18
CLDND1-231ENST00000515620 SDHAF2Q9NX18 166 aa7.68□□□□□ -1.18
CLDND1-231ENST00000515620 RDH8Q9NYR8 311 aa7.68□□□□□ -1.18
CLDND1-231ENST00000515620 MRPL27Q9P0M9 148 aaKnown RBP7.68□□□□□ -1.18
CLDND1-231ENST00000515620 TRBV5-7A0A0A0MS05 114 aa7.67□□□□□ -1.18
CLDND1-231ENST00000515620 TRBV6-6A0A0A6YYG2 114 aa7.67□□□□□ -1.18
CLDND1-231ENST00000515620 IGKV1-6A0A0C4DH72 117 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms