RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 MRPS7Q9Y2R9 242 aaKnown RBP9.99□□□□□ -0.81
CLCN3-210ENST00000515420 SMIM31A0A1B0GVY4 71 aa9.98□□□□□ -0.81
CLCN3-210ENST00000515420 SHOXO15266 292 aa9.98□□□□□ -0.81
CLCN3-210ENST00000515420 WIPF1O43516 503 aa9.98□□□□□ -0.81
CLCN3-210ENST00000515420 CA2P00918 260 aa9.98□□□□□ -0.81
CLCN3-210ENST00000515420 IGLV2-14P01704 120 aa9.98□□□□□ -0.81
CLCN3-210ENST00000515420 EIF4EP06730 217 aaKnown RBP9.98□□□□□ -0.81
CLCN3-210ENST00000515420 CRYGBP07316 175 aa9.98□□□□□ -0.81
CLCN3-210ENST00000515420 EGR2P11161 476 aaPredicted RBP9.98□□□□□ -0.81
CLCN3-210ENST00000515420 NAT1P18440 290 aa9.98□□□□□ -0.81
CLCN3-210ENST00000515420 RUNX1Q01196 453 aa9.98□□□□□ -0.81
CLCN3-210ENST00000515420 CDK10Q15131 360 aa9.98□□□□□ -0.81
CLCN3-210ENST00000515420 VMA21Q3ZAQ7 101 aa9.98□□□□□ -0.81
CLCN3-210ENST00000515420 GPR107Q5VW38 600 aa9.98□□□□□ -0.81
CLCN3-210ENST00000515420 MZT2AQ6P582 158 aa9.98□□□□□ -0.81
CLCN3-210ENST00000515420 ZNF66Q6ZN08 573 aa9.98□□□□□ -0.81
CLCN3-210ENST00000515420 KCTD9Q7L273 389 aa9.98□□□□□ -0.81
CLCN3-210ENST00000515420 REC114Q7Z4M0 266 aa9.98□□□□□ -0.81
CLCN3-210ENST00000515420 MRPL41Q8IXM3 137 aaKnown RBP9.98□□□□□ -0.81
CLCN3-210ENST00000515420 TEX45Q8NA69 505 aa9.98□□□□□ -0.81
CLCN3-210ENST00000515420 ZBTB34Q8NCN2 500 aa9.98□□□□□ -0.81
CLCN3-210ENST00000515420 OR5M8Q8NGP6 311 aa9.98□□□□□ -0.81
CLCN3-210ENST00000515420 GIMAP1Q8WWP7 306 aa9.98□□□□□ -0.81
CLCN3-210ENST00000515420 ARPC1AQ92747 370 aa9.98□□□□□ -0.81
CLCN3-210ENST00000515420 TMEM68Q96MH6 324 aa9.98□□□□□ -0.81
CLCN3-210ENST00000515420 BCL7BQ9BQE9 202 aa9.98□□□□□ -0.81
CLCN3-210ENST00000515420 MCRIP2Q9BUT9 160 aaKnown RBP9.98□□□□□ -0.81
CLCN3-210ENST00000515420 NAA50Q9GZZ1 169 aaKnown RBP9.98□□□□□ -0.81
CLCN3-210ENST00000515420 COMMD3Q9UBI1 195 aa9.98□□□□□ -0.81
CLCN3-210ENST00000515420 FOXA2Q9Y261 457 aaPredicted RBP9.98□□□□□ -0.81
CLCN3-210ENST00000515420 FBXO7Q9Y3I1 522 aa9.98□□□□□ -0.81
CLCN3-210ENST00000515420 WSB1Q9Y6I7 421 aa9.98□□□□□ -0.81
CLCN3-210ENST00000515420 TNCP24821 2201 aa9.97□□□□□ -0.81
CLCN3-210ENST00000515420 CCL24O00175 119 aa9.97□□□□□ -0.81
CLCN3-210ENST00000515420 CREBL2O60519 120 aaPredicted RBP9.97□□□□□ -0.81
CLCN3-210ENST00000515420 TPPPO94811 219 aa9.97□□□□□ -0.81
CLCN3-210ENST00000515420 CRYZL1O95825 349 aa9.97□□□□□ -0.81
CLCN3-210ENST00000515420 PPYP01298 95 aa9.97□□□□□ -0.81
CLCN3-210ENST00000515420 PTHLHP12272 177 aa9.97□□□□□ -0.81
CLCN3-210ENST00000515420 ZNF182P17025 639 aaPredicted RBP9.97□□□□□ -0.81
CLCN3-210ENST00000515420 FCGR2CP31995 323 aa9.97□□□□□ -0.81
CLCN3-210ENST00000515420 PRSS3P35030 304 aa9.97□□□□□ -0.81
CLCN3-210ENST00000515420 RAB9AP51151 201 aa9.97□□□□□ -0.81
CLCN3-210ENST00000515420 TAS2R46P59540 309 aa9.97□□□□□ -0.81
CLCN3-210ENST00000515420 UBE2KP61086 200 aa9.97□□□□□ -0.81
CLCN3-210ENST00000515420 EIF4EBP1Q13541 118 aaPredicted RBP9.97□□□□□ -0.81
CLCN3-210ENST00000515420 FXYD3Q14802 87 aa9.97□□□□□ -0.81
CLCN3-210ENST00000515420 ECSCRQ19T08 205 aa9.97□□□□□ -0.81
CLCN3-210ENST00000515420 OXLD1Q5BKU9 147 aa9.97□□□□□ -0.81
CLCN3-210ENST00000515420 LCNL1Q6ZST4 164 aa9.97□□□□□ -0.81
CLCN3-210ENST00000515420 C18orf65Q6ZTR6 163 aa9.97□□□□□ -0.81
CLCN3-210ENST00000515420 C1QL4Q86Z23 238 aa9.97□□□□□ -0.81
CLCN3-210ENST00000515420 ZNF491Q8N8L2 437 aa9.97□□□□□ -0.81
CLCN3-210ENST00000515420 BORCS5Q969J3 196 aa9.97□□□□□ -0.81
CLCN3-210ENST00000515420 SCPEP1Q9HB40 452 aa9.97□□□□□ -0.81
CLCN3-210ENST00000515420 TPSG1Q9NRR2 321 aa9.97□□□□□ -0.81
CLCN3-210ENST00000515420 ADAM30Q9UKF2 790 aa9.97□□□□□ -0.81
CLCN3-210ENST00000515420 A0A1W2PN81 502 aa9.96□□□□□ -0.82
CLCN3-210ENST00000515420 SRRM4A7MD48 611 aaKnown RBP9.96□□□□□ -0.82
CLCN3-210ENST00000515420 H3BUA1 57 aa9.96□□□□□ -0.82
CLCN3-210ENST00000515420 SULT1C2O00338 296 aa9.96□□□□□ -0.82
CLCN3-210ENST00000515420 AADACP22760 399 aa9.96□□□□□ -0.82
CLCN3-210ENST00000515420 CD40LGP29965 261 aa9.96□□□□□ -0.82
CLCN3-210ENST00000515420 CHRNA7P36544 502 aa9.96□□□□□ -0.82
CLCN3-210ENST00000515420 KIR2DS2P43631 304 aa9.96□□□□□ -0.82
CLCN3-210ENST00000515420 FHL3Q13643 280 aa9.96□□□□□ -0.82
CLCN3-210ENST00000515420 KIAA0141Q14154 515 aaPredicted RBP9.96□□□□□ -0.82
CLCN3-210ENST00000515420 ACTBL2Q562R1 376 aa9.96□□□□□ -0.82
CLCN3-210ENST00000515420 UNQ5815/PRO19632Q6UWF5 114 aa9.96□□□□□ -0.82
CLCN3-210ENST00000515420 DHRS11Q6UWP2 260 aa9.96□□□□□ -0.82
CLCN3-210ENST00000515420 OR4S2Q8NH73 311 aa9.96□□□□□ -0.82
CLCN3-210ENST00000515420 GPX8Q8TED1 209 aa9.96□□□□□ -0.82
CLCN3-210ENST00000515420 ABHD5Q8WTS1 349 aa9.96□□□□□ -0.82
CLCN3-210ENST00000515420 RAX2Q96IS3 184 aa9.96□□□□□ -0.82
CLCN3-210ENST00000515420 CLCC1Q96S66 551 aa9.96□□□□□ -0.82
CLCN3-210ENST00000515420 SLA2Q9H6Q3 261 aa9.96□□□□□ -0.82
CLCN3-210ENST00000515420 VSIG4Q9Y279 399 aa9.96□□□□□ -0.82
CLCN3-210ENST00000515420 I3L521 148 aa9.95□□□□□ -0.82
CLCN3-210ENST00000515420 J3QRK9 145 aa9.95□□□□□ -0.82
CLCN3-210ENST00000515420 ARPC1BO15143 372 aaKnown RBP9.95□□□□□ -0.82
CLCN3-210ENST00000515420 SOX15O60248 233 aa9.95□□□□□ -0.82
CLCN3-210ENST00000515420 FCGR3BO75015 233 aa9.95□□□□□ -0.82
CLCN3-210ENST00000515420 BRI3O95415 125 aa9.95□□□□□ -0.82
CLCN3-210ENST00000515420 IGLL1P15814 213 aa9.95□□□□□ -0.82
CLCN3-210ENST00000515420 ELK1P19419 428 aa9.95□□□□□ -0.82
CLCN3-210ENST00000515420 SSBP2P81877 361 aaPredicted RBP9.95□□□□□ -0.82
CLCN3-210ENST00000515420 DYRK1AQ13627 763 aa9.95□□□□□ -0.82
CLCN3-210ENST00000515420 DMRTA1Q5VZB9 504 aa9.95□□□□□ -0.82
CLCN3-210ENST00000515420 MFSD4AQ8N468 514 aa9.95□□□□□ -0.82
CLCN3-210ENST00000515420 LFNGQ8NES3 379 aa9.95□□□□□ -0.82
CLCN3-210ENST00000515420 VSTM2AQ8TAG5 236 aa9.95□□□□□ -0.82
CLCN3-210ENST00000515420 RAB2BQ8WUD1 216 aa9.95□□□□□ -0.82
CLCN3-210ENST00000515420 SECTM1Q8WVN6 248 aa9.95□□□□□ -0.82
CLCN3-210ENST00000515420 TCTEX1D2Q8WW35 142 aa9.95□□□□□ -0.82
CLCN3-210ENST00000515420 KLK15Q9H2R5 256 aa9.95□□□□□ -0.82
CLCN3-210ENST00000515420 EHFQ9NZC4 300 aa9.95□□□□□ -0.82
CLCN3-210ENST00000515420 MEIS3P1A6NDR6 274 aa9.94□□□□□ -0.82
CLCN3-210ENST00000515420 RBFOX2O43251 390 aaKnown RBP eCLIP9.94□□□□□ -0.82
CLCN3-210ENST00000515420 HPGDSO60760 199 aa9.94□□□□□ -0.82
CLCN3-210ENST00000515420 CNIH1O95406 144 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms