RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 PRELID3BQ9Y3B1 194 aa7.45□□□□□ -1.22
CPNE4-213ENST00000515418 MMP24Q9Y5R2 645 aa7.45□□□□□ -1.22
CPNE4-213ENST00000515418 POMT1Q9Y6A1 747 aa7.45□□□□□ -1.22
CPNE4-213ENST00000515418 U3KQ87 197 aa7.45□□□□□ -1.22
CPNE4-213ENST00000515418 TRAV3A0A0B4J244 114 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 A0A0D9SG52 128 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 A0A1W2PPH5 198 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 A0A1W2PRD5 423 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 A0A1W2PRF3 423 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 A0A1W2PRM7 423 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 MARCH11A6NNE9 402 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 TOR1AO14656 332 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 SSSCA1O60232 199 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 OR2F2O95006 317 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 P0C879 139 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 PET100P0DJ07 73 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 OR2F1Q13607 317 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 ZNF833PQ6ZTB9 187 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 H2BFWTQ7Z2G1 175 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 ZNF680Q8NEM1 530 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 FAM216AQ8WUB2 273 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 FAM168AQ92567 244 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 ST6GALNAC6Q969X2 333 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 IGHV4-61A0A0C4DH41 118 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 FAM24AA6NFZ4 105 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 SPDEFO95238 335 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 HPRT1P00492 218 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 IGLV1-47P01700 117 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 OR9G9P0C7N8 305 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 PAX6P26367 422 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 RPL12P30050 165 aaKnown RBP7.44□□□□□ -1.22
CPNE4-213ENST00000515418 THBS3P49746 956 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 NHLH2Q02577 135 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 KLRD1Q13241 179 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 SPINK9Q5DT21 86 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 LINC00311Q8N616 119 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 TCTEX1D1Q8N7M0 179 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 ZNF596Q8TC21 504 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 CD300LFQ8TDQ1 290 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 PCNPQ8WW12 178 aaKnown RBP7.44□□□□□ -1.22
CPNE4-213ENST00000515418 PLEKHA2Q9HB19 425 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 ZC4H2Q9NQZ6 224 aa7.44□□□□□ -1.22
CPNE4-213ENST00000515418 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.43□□□□□ -1.22
CPNE4-213ENST00000515418 IGHV4-30-2A0A087WSY4 118 aa7.43□□□□□ -1.22
CPNE4-213ENST00000515418 IGHV3-72A0A0B4J1Y9 119 aa7.43□□□□□ -1.22
CPNE4-213ENST00000515418 SRRM4A7MD48 611 aaKnown RBP7.43□□□□□ -1.22
CPNE4-213ENST00000515418 FAM157AC9JC47 383 aa7.43□□□□□ -1.22
CPNE4-213ENST00000515418 E5RGE8 158 aa7.43□□□□□ -1.22
CPNE4-213ENST00000515418 H7C2Y5 167 aa7.43□□□□□ -1.22
CPNE4-213ENST00000515418 WRBO00258 174 aa7.43□□□□□ -1.22
CPNE4-213ENST00000515418 RGS13O14921 159 aa7.43□□□□□ -1.22
CPNE4-213ENST00000515418 RBMXL2O75526 392 aaKnown RBP7.43□□□□□ -1.22
CPNE4-213ENST00000515418 SLC25A6P12236 298 aa7.43□□□□□ -1.22
CPNE4-213ENST00000515418 NUP62P37198 522 aaPredicted RBP7.43□□□□□ -1.22
CPNE4-213ENST00000515418 PRRX1P54821 245 aa7.43□□□□□ -1.22
CPNE4-213ENST00000515418 PAX9P55771 341 aa7.43□□□□□ -1.22
CPNE4-213ENST00000515418 ZNF345Q14585 488 aa7.43□□□□□ -1.22
CPNE4-213ENST00000515418 MIDNQ504T8 468 aa7.43□□□□□ -1.22
CPNE4-213ENST00000515418 LDLRAD2Q5SZI1 272 aa7.43□□□□□ -1.22
CPNE4-213ENST00000515418 C8orf31Q8N9H6 132 aa7.43□□□□□ -1.22
CPNE4-213ENST00000515418 C10orf105Q8TEF2 133 aa7.43□□□□□ -1.22
CPNE4-213ENST00000515418 AQP10Q96PS8 301 aa7.43□□□□□ -1.22
CPNE4-213ENST00000515418 CLEC7AQ9BXN2 247 aa7.43□□□□□ -1.22
CPNE4-213ENST00000515418 SMIM3Q9BZL3 60 aa7.43□□□□□ -1.22
CPNE4-213ENST00000515418 C11orf1Q9H5F2 150 aa7.43□□□□□ -1.22
CPNE4-213ENST00000515418 FAM212BQ9NTI7 297 aaPredicted RBP7.43□□□□□ -1.22
CPNE4-213ENST00000515418 CCDC168Q8NDH2 2452 aa7.43□□□□□ -1.22
CPNE4-213ENST00000515418 ABCA1O95477 2261 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 hCG_1809904A0A1W2PP81 198 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 A0A1W2PPE2 198 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 KANTRA0A1W2PQU2 76 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 A0A1W2PR64 198 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 A0A1W2PRV1 198 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 H3BP45 60 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 BUB1B-PAK6H3BSN5 160 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 RBFOX2O43251 390 aaKnown RBP eCLIP7.42□□□□□ -1.22
CPNE4-213ENST00000515418 IAPPP10997 89 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 CAV2P51636 162 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 OR2B8PP59922 312 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 PAX2Q02962 417 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 HLA-DRB5Q30154 266 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 CLEC2AQ6UVW9 174 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 OR4S2Q8NH73 311 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 TMEM186Q96B77 213 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 ADTRPQ96IZ2 230 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 RITA1Q96K30 269 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 RHOVQ96L33 236 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 NABP2Q9BQ15 211 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 PIMREGQ9BSJ6 248 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 ZNF471Q9BX82 626 aaPredicted RBP7.42□□□□□ -1.22
CPNE4-213ENST00000515418 CYTL1Q9NRR1 136 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.42□□□□□ -1.22
CPNE4-213ENST00000515418 SLC35D1Q9NTN3 355 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 CSPG4Q6UVK1 2322 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 HECTD1Q9ULT8 2610 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 IGSF23A1L1A6 192 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 H0YJW9 148 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 BCL2L11O43521 198 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 SYNGR2O43760 224 aa7.42□□□□□ -1.22
CPNE4-213ENST00000515418 SNAPC5O75971 98 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms