RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 OR2T8A6NH00 312 aa12.28□□□□□ -0.44
TRIO-222ENST00000515144 PRB4P10163 310 aaPredicted RBP12.28□□□□□ -0.44
TRIO-222ENST00000515144 MFAP4P55083 255 aa12.28□□□□□ -0.44
TRIO-222ENST00000515144 OR8A1Q8NGG7 326 aa12.28□□□□□ -0.44
TRIO-222ENST00000515144 OR2T10Q8NGZ9 312 aa12.28□□□□□ -0.44
TRIO-222ENST00000515144 ZNF418Q8TF45 676 aaPredicted RBP12.28□□□□□ -0.44
TRIO-222ENST00000515144 TNRC6AQ8NDV7 1962 aaKnown RBP12.27□□□□□ -0.44
TRIO-222ENST00000515144 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.27□□□□□ -0.44
TRIO-222ENST00000515144 LHX2P50458 406 aa12.27□□□□□ -0.44
TRIO-222ENST00000515144 SLC35E3Q7Z769 313 aa12.27□□□□□ -0.44
TRIO-222ENST00000515144 VDAC2P45880 294 aaPredicted RBP12.27□□□□□ -0.44
TRIO-222ENST00000515144 EWSR1Q01844 656 aaKnown RBP eCLIP12.27□□□□□ -0.44
TRIO-222ENST00000515144 WDFY1Q8IWB7 410 aa12.27□□□□□ -0.44
TRIO-222ENST00000515144 MFSD2BA6NFX1 497 aa12.27□□□□□ -0.45
TRIO-222ENST00000515144 MBPP02686 304 aaPredicted RBP12.27□□□□□ -0.45
TRIO-222ENST00000515144 RPL13AP40429 203 aaKnown RBP12.27□□□□□ -0.45
TRIO-222ENST00000515144 CALHM1Q8IU99 346 aa12.27□□□□□ -0.45
TRIO-222ENST00000515144 NEU4Q8WWR8 484 aaPredicted RBP12.27□□□□□ -0.45
TRIO-222ENST00000515144 PLCE1Q9P212 2302 aa12.27□□□□□ -0.45
TRIO-222ENST00000515144 KLF4O43474 513 aa12.27□□□□□ -0.45
TRIO-222ENST00000515144 LINC00869P0C866 280 aa12.27□□□□□ -0.45
TRIO-222ENST00000515144 GZMMP51124 257 aa12.27□□□□□ -0.45
TRIO-222ENST00000515144 TMEM91Q6ZNR0 172 aa12.27□□□□□ -0.45
TRIO-222ENST00000515144 F12P00748 615 aaPredicted RBP12.27□□□□□ -0.45
TRIO-222ENST00000515144 SULT1A1P50225 295 aa12.27□□□□□ -0.45
TRIO-222ENST00000515144 IL24Q13007 206 aa12.27□□□□□ -0.45
TRIO-222ENST00000515144 ZXDCQ2QGD7 858 aaPredicted RBP12.27□□□□□ -0.45
TRIO-222ENST00000515144 FAM216BQ8N7L0 139 aa12.27□□□□□ -0.45
TRIO-222ENST00000515144 EEF1AKMT3Q96AZ1 226 aa12.27□□□□□ -0.45
TRIO-222ENST00000515144 FBXL15Q9H469 300 aa12.27□□□□□ -0.45
TRIO-222ENST00000515144 IGKV1D-42A0A075B6H8 117 aa12.27□□□□□ -0.45
TRIO-222ENST00000515144 IGLV3-19P01714 112 aa12.27□□□□□ -0.45
TRIO-222ENST00000515144 EGR4Q05215 589 aa12.27□□□□□ -0.45
TRIO-222ENST00000515144 OR1L6Q8NGR2 347 aa12.27□□□□□ -0.45
TRIO-222ENST00000515144 FAM206AQ9NX38 181 aa12.27□□□□□ -0.45
TRIO-222ENST00000515144 IL19Q9UHD0 177 aa12.27□□□□□ -0.45
TRIO-222ENST00000515144 TRBV5-3A0A0A0MS03 114 aa12.26□□□□□ -0.45
TRIO-222ENST00000515144 IFNL4K9M1U5 179 aa12.26□□□□□ -0.45
TRIO-222ENST00000515144 LURAP1Q96LR2 239 aa12.26□□□□□ -0.45
TRIO-222ENST00000515144 PXMP4Q9Y6I8 212 aa12.26□□□□□ -0.45
TRIO-222ENST00000515144 C1QTNF9BB2RNN3 333 aa12.26□□□□□ -0.45
TRIO-222ENST00000515144 ADAM11O75078 769 aa12.26□□□□□ -0.45
TRIO-222ENST00000515144 C1QTNF9P0C862 333 aa12.26□□□□□ -0.45
TRIO-222ENST00000515144 S1PR2O95136 353 aa12.26□□□□□ -0.45
TRIO-222ENST00000515144 CXorf1O96002 111 aa12.26□□□□□ -0.45
TRIO-222ENST00000515144 PRSS54Q6PEW0 395 aa12.26□□□□□ -0.45
TRIO-222ENST00000515144 MANBALQ9NQG1 85 aa12.26□□□□□ -0.45
TRIO-222ENST00000515144 IGLV1-36A0A0B4J1U3 117 aa12.26□□□□□ -0.45
TRIO-222ENST00000515144 IGKV1D-43A0A0B4J1Z2 117 aa12.26□□□□□ -0.45
TRIO-222ENST00000515144 TRAV40A0A0B4J280 105 aa12.26□□□□□ -0.45
TRIO-222ENST00000515144 IGSF23A1L1A6 192 aa12.26□□□□□ -0.45
TRIO-222ENST00000515144 TMEM127O75204 238 aa12.26□□□□□ -0.45
TRIO-222ENST00000515144 AMMECR1LQ6DCA0 310 aa12.26□□□□□ -0.45
TRIO-222ENST00000515144 CTHRC1Q96CG8 243 aa12.26□□□□□ -0.45
TRIO-222ENST00000515144 QTRT1Q9BXR0 403 aaKnown RBP12.26□□□□□ -0.45
TRIO-222ENST00000515144 DEDDO75618 318 aa12.26□□□□□ -0.45
TRIO-222ENST00000515144 PTX4Q96A99 478 aa12.26□□□□□ -0.45
TRIO-222ENST00000515144 MARS2Q96GW9 593 aaKnown RBP12.26□□□□□ -0.45
TRIO-222ENST00000515144 METRNQ9UJH8 293 aa12.26□□□□□ -0.45
TRIO-222ENST00000515144 RBFOX3A6NFN3 312 aa12.26□□□□□ -0.45
TRIO-222ENST00000515144 PHLDA3Q9Y5J5 127 aa12.26□□□□□ -0.45
TRIO-222ENST00000515144 OR2A4O95047 310 aa12.25□□□□□ -0.45
TRIO-222ENST00000515144 OR2A7Q96R45 310 aa12.25□□□□□ -0.45
TRIO-222ENST00000515144 PLXNA2O75051 1894 aa12.25□□□□□ -0.45
TRIO-222ENST00000515144 MELTFP08582 738 aa12.25□□□□□ -0.45
TRIO-222ENST00000515144 PMS2P11Q13670 270 aa12.25□□□□□ -0.45
TRIO-222ENST00000515144 TRAV34A0A0B4J273 112 aa12.25□□□□□ -0.45
TRIO-222ENST00000515144 IGF2P01344 180 aa12.25□□□□□ -0.45
TRIO-222ENST00000515144 UNC119Q13432 240 aa12.25□□□□□ -0.45
TRIO-222ENST00000515144 SCMH1Q96GD3 660 aa12.25□□□□□ -0.45
TRIO-222ENST00000515144 CBLN4Q9NTU7 201 aa12.25□□□□□ -0.45
TRIO-222ENST00000515144 M0R2Z0 102 aa12.25□□□□□ -0.45
TRIO-222ENST00000515144 LRRC75BQ2VPJ9 315 aa12.25□□□□□ -0.45
TRIO-222ENST00000515144 CLEC19AQ6UXS0 136 aa12.25□□□□□ -0.45
TRIO-222ENST00000515144 GLMPQ8WWB7 406 aa12.25□□□□□ -0.45
TRIO-222ENST00000515144 RHOVQ96L33 236 aa12.25□□□□□ -0.45
TRIO-222ENST00000515144 DEPPQ9NTK1 212 aa12.25□□□□□ -0.45
TRIO-222ENST00000515144 MOSP00540 346 aa12.25□□□□□ -0.45
TRIO-222ENST00000515144 OR10J1P30954 320 aa12.25□□□□□ -0.45
TRIO-222ENST00000515144 P2RY1P47900 373 aa12.25□□□□□ -0.45
TRIO-222ENST00000515144 C1orf162Q8NEQ5 155 aaPredicted RBP12.25□□□□□ -0.45
TRIO-222ENST00000515144 COL25A1Q9BXS0 654 aaPredicted RBP12.25□□□□□ -0.45
TRIO-222ENST00000515144 PSMB2P49721 201 aa12.24□□□□□ -0.45
TRIO-222ENST00000515144 ACP7Q6ZNF0 438 aa12.24□□□□□ -0.45
TRIO-222ENST00000515144 IMMP1LQ96LU5 166 aa12.24□□□□□ -0.45
TRIO-222ENST00000515144 LINC00527Q9UJ94 153 aa12.24□□□□□ -0.45
TRIO-222ENST00000515144 TCRBV4S1A1TA0A5B7 111 aa12.24□□□□□ -0.45
TRIO-222ENST00000515144 GPX1P07203 203 aa12.24□□□□□ -0.45
TRIO-222ENST00000515144 RND2P52198 227 aa12.24□□□□□ -0.45
TRIO-222ENST00000515144 SCAND1P57086 179 aa12.24□□□□□ -0.45
TRIO-222ENST00000515144 WFDC12Q8WWY7 111 aa12.24□□□□□ -0.45
TRIO-222ENST00000515144 WFIKKN1Q96NZ8 548 aa12.24□□□□□ -0.45
TRIO-222ENST00000515144 SLC35B3Q9H1N7 401 aa12.24□□□□□ -0.45
TRIO-222ENST00000515144 FGFRL1Q8N441 504 aa12.24□□□□□ -0.45
TRIO-222ENST00000515144 FAM24BQ8N5W8 94 aa12.24□□□□□ -0.45
TRIO-222ENST00000515144 OR9G1Q8NH87 305 aa12.24□□□□□ -0.45
TRIO-222ENST00000515144 NPVFQ9HCQ7 196 aa12.24□□□□□ -0.45
TRIO-222ENST00000515144 PCNX3Q9H6A9 2034 aa12.24□□□□□ -0.45
TRIO-222ENST00000515144 OR4C46A6NHA9 309 aa12.24□□□□□ -0.45
TRIO-222ENST00000515144 SNRPD3P62318 126 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms