RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 MED6O75586 246 aa13.03□□□□□ -0.32
NUP54-214ENST00000514307 TOX4O94842 621 aa13.03□□□□□ -0.32
NUP54-214ENST00000514307 S1PR2O95136 353 aa13.03□□□□□ -0.32
NUP54-214ENST00000514307 SCGB1D2O95969 90 aa13.03□□□□□ -0.32
NUP54-214ENST00000514307 IGKV1-5P01602 117 aa13.03□□□□□ -0.32
NUP54-214ENST00000514307 MBPP02686 304 aaPredicted RBP13.03□□□□□ -0.32
NUP54-214ENST00000514307 COX7A1P24310 79 aa13.03□□□□□ -0.32
NUP54-214ENST00000514307 LGALS4P56470 323 aa13.03□□□□□ -0.32
NUP54-214ENST00000514307 BRWD1-AS2P59051 145 aa13.03□□□□□ -0.32
NUP54-214ENST00000514307 PAX2Q02962 417 aa13.03□□□□□ -0.32
NUP54-214ENST00000514307 LGALSLQ3ZCW2 172 aaPredicted RBP13.03□□□□□ -0.32
NUP54-214ENST00000514307 PRSS57Q6UWY2 283 aa13.03□□□□□ -0.32
NUP54-214ENST00000514307 C9orf62Q8N4C0 152 aa13.03□□□□□ -0.32
NUP54-214ENST00000514307 DMBX1Q8NFW5 382 aa13.03□□□□□ -0.32
NUP54-214ENST00000514307 OR5AN1Q8NGI8 311 aa13.03□□□□□ -0.32
NUP54-214ENST00000514307 OR4D5Q8NGN0 318 aa13.03□□□□□ -0.32
NUP54-214ENST00000514307 DCUN1D4Q92564 292 aa13.03□□□□□ -0.32
NUP54-214ENST00000514307 DPM3Q9P2X0 92 aa13.03□□□□□ -0.32
NUP54-214ENST00000514307 LSM5Q9Y4Y9 91 aaKnown RBP13.03□□□□□ -0.32
NUP54-214ENST00000514307 POMT1Q9Y6A1 747 aa13.03□□□□□ -0.32
NUP54-214ENST00000514307 IGHV4-30-2A0A087WSY4 118 aa13.02□□□□□ -0.33
NUP54-214ENST00000514307 IGHV4-61A0A0C4DH41 118 aa13.02□□□□□ -0.33
NUP54-214ENST00000514307 H7C2Y5 167 aa13.02□□□□□ -0.33
NUP54-214ENST00000514307 PITX3O75364 302 aa13.02□□□□□ -0.33
NUP54-214ENST00000514307 DEDDO75618 318 aa13.02□□□□□ -0.33
NUP54-214ENST00000514307 LY86O95711 162 aa13.02□□□□□ -0.33
NUP54-214ENST00000514307 ARG1P05089 322 aa13.02□□□□□ -0.33
NUP54-214ENST00000514307 G6PCP35575 357 aa13.02□□□□□ -0.33
NUP54-214ENST00000514307 RAB13P51153 203 aa13.02□□□□□ -0.33
NUP54-214ENST00000514307 VAMP2P63027 116 aa13.02□□□□□ -0.33
NUP54-214ENST00000514307 GPR157Q5UAW9 335 aa13.02□□□□□ -0.33
NUP54-214ENST00000514307 C1orf229Q6ZS94 237 aaPredicted RBP13.02□□□□□ -0.33
NUP54-214ENST00000514307 PDPNQ86YL7 162 aa13.02□□□□□ -0.33
NUP54-214ENST00000514307 FOXRED2Q8IWF2 684 aa13.02□□□□□ -0.33
NUP54-214ENST00000514307 OSR1Q8TAX0 266 aaPredicted RBP13.02□□□□□ -0.33
NUP54-214ENST00000514307 RPEQ96AT9 228 aa13.02□□□□□ -0.33
NUP54-214ENST00000514307 FLYWCH2Q96CP2 140 aaKnown RBP13.02□□□□□ -0.33
NUP54-214ENST00000514307 GON7Q9BXV9 100 aa13.02□□□□□ -0.33
NUP54-214ENST00000514307 MBD2Q9UBB5 411 aa13.02□□□□□ -0.33
NUP54-214ENST00000514307 TNFSF18Q9UNG2 199 aa13.02□□□□□ -0.33
NUP54-214ENST00000514307 MARCH11A6NNE9 402 aa13.01□□□□□ -0.33
NUP54-214ENST00000514307 OOSP1A8MZH6 123 aa13.01□□□□□ -0.33
NUP54-214ENST00000514307 B4DSR2 109 aa13.01□□□□□ -0.33
NUP54-214ENST00000514307 K7EPK0 472 aa13.01□□□□□ -0.33
NUP54-214ENST00000514307 GPR137BO60478 399 aa13.01□□□□□ -0.33
NUP54-214ENST00000514307 CRYZL1O95825 349 aa13.01□□□□□ -0.33
NUP54-214ENST00000514307 S100A11P31949 105 aa13.01□□□□□ -0.33
NUP54-214ENST00000514307 LINC00205P59089 165 aa13.01□□□□□ -0.33
NUP54-214ENST00000514307 KRTAP10-9P60411 292 aa13.01□□□□□ -0.33
NUP54-214ENST00000514307 MINOS1Q5TGZ0 78 aa13.01□□□□□ -0.33
NUP54-214ENST00000514307 LAMTOR1Q6IAA8 161 aa13.01□□□□□ -0.33
NUP54-214ENST00000514307 TMUB2Q71RG4 321 aa13.01□□□□□ -0.33
NUP54-214ENST00000514307 VMO1Q7Z5L0 202 aa13.01□□□□□ -0.33
NUP54-214ENST00000514307 FAM71E2Q8N5Q1 922 aa13.01□□□□□ -0.33
NUP54-214ENST00000514307 OR4A16Q8NH70 328 aa13.01□□□□□ -0.33
NUP54-214ENST00000514307 GRPEL2Q8TAA5 225 aa13.01□□□□□ -0.33
NUP54-214ENST00000514307 RAB40CQ96S21 281 aa13.01□□□□□ -0.33
NUP54-214ENST00000514307 NABP2Q9BQ15 211 aa13.01□□□□□ -0.33
NUP54-214ENST00000514307 SIRPDQ9H106 197 aa13.01□□□□□ -0.33
NUP54-214ENST00000514307 LPAR2Q9HBW0 351 aa13.01□□□□□ -0.33
NUP54-214ENST00000514307 ZC4H2Q9NQZ6 224 aa13.01□□□□□ -0.33
NUP54-214ENST00000514307 CACNG5Q9UF02 275 aa13.01□□□□□ -0.33
NUP54-214ENST00000514307 WASHC3Q9Y3C0 194 aa13.01□□□□□ -0.33
NUP54-214ENST00000514307 MINOS1-NBL1R4GNA1 71 aa13.01□□□□□ -0.33
NUP54-214ENST00000514307 LY6LH3BQJ8 138 aa13□□□□□ -0.33
NUP54-214ENST00000514307 RBMXL2O75526 392 aaKnown RBP13□□□□□ -0.33
NUP54-214ENST00000514307 GATA3P23771 443 aa13□□□□□ -0.33
NUP54-214ENST00000514307 P2RY1P47900 373 aa13□□□□□ -0.33
NUP54-214ENST00000514307 LGALS7P47929 136 aa13□□□□□ -0.33
NUP54-214ENST00000514307 UBE2E1P51965 193 aa13□□□□□ -0.33
NUP54-214ENST00000514307 PAX8Q06710 450 aa13□□□□□ -0.33
NUP54-214ENST00000514307 ZNF345Q14585 488 aa13□□□□□ -0.33
NUP54-214ENST00000514307 TMEM177Q53S58 311 aa13□□□□□ -0.33
NUP54-214ENST00000514307 CXorf66Q5JRM2 361 aaPredicted RBP13□□□□□ -0.33
NUP54-214ENST00000514307 MOB3BQ86TA1 216 aa13□□□□□ -0.33
NUP54-214ENST00000514307 KCNRGQ8N5I3 272 aa13□□□□□ -0.33
NUP54-214ENST00000514307 OR4C13Q8NGP0 309 aa13□□□□□ -0.33
NUP54-214ENST00000514307 RNF5Q99942 180 aa13□□□□□ -0.33
NUP54-214ENST00000514307 MRPL20Q9BYC9 149 aaKnown RBP13□□□□□ -0.33
NUP54-214ENST00000514307 SLA2Q9H6Q3 261 aa13□□□□□ -0.33
NUP54-214ENST00000514307 SIRT7Q9NRC8 400 aa13□□□□□ -0.33
NUP54-214ENST00000514307 MMP26Q9NRE1 261 aa13□□□□□ -0.33
NUP54-214ENST00000514307 FKBP11Q9NYL4 201 aa13□□□□□ -0.33
NUP54-214ENST00000514307 FAM157AC9JC47 383 aa12.99□□□□□ -0.33
NUP54-214ENST00000514307 H0YIZ8 118 aa12.99□□□□□ -0.33
NUP54-214ENST00000514307 H0YJW9 148 aa12.99□□□□□ -0.33
NUP54-214ENST00000514307 SHOXO15266 292 aa12.99□□□□□ -0.33
NUP54-214ENST00000514307 CHST1O43916 411 aa12.99□□□□□ -0.33
NUP54-214ENST00000514307 CXCL2P19875 107 aa12.99□□□□□ -0.33
NUP54-214ENST00000514307 RPS16P62249 146 aaKnown RBP12.99□□□□□ -0.33
NUP54-214ENST00000514307 RPL23AP62750 156 aaKnown RBP12.99□□□□□ -0.33
NUP54-214ENST00000514307 OPCMLQ14982 345 aa12.99□□□□□ -0.33
NUP54-214ENST00000514307 POU2AF1Q16633 256 aa12.99□□□□□ -0.33
NUP54-214ENST00000514307 TPTE2P1Q5T6R2 138 aa12.99□□□□□ -0.33
NUP54-214ENST00000514307 CCDC144NLQ6NUI1 221 aa12.99□□□□□ -0.33
NUP54-214ENST00000514307 Q6ZRM9 215 aa12.99□□□□□ -0.33
NUP54-214ENST00000514307 OR8H3Q8N146 312 aa12.99□□□□□ -0.33
NUP54-214ENST00000514307 OR4P4Q8NGL7 312 aa12.99□□□□□ -0.33
NUP54-214ENST00000514307 C1orf159Q96HA4 380 aa12.99□□□□□ -0.33
NUP54-214ENST00000514307 RHOVQ96L33 236 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms