RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 SETD6Q8TBK2 473 aa8.09□□□□□ -1.11
DDX41-216ENST00000513562 FBLIM1Q8WUP2 373 aa8.09□□□□□ -1.11
DDX41-216ENST00000513562 Q96MT0 163 aa8.09□□□□□ -1.11
DDX41-216ENST00000513562 UQCC2Q9BRT2 126 aa8.09□□□□□ -1.11
DDX41-216ENST00000513562 MFFQ9GZY8 342 aa8.09□□□□□ -1.11
DDX41-216ENST00000513562 GHRLQ9UBU3 117 aa8.09□□□□□ -1.11
DDX41-216ENST00000513562 EXOSC1Q9Y3B2 195 aaKnown RBP8.09□□□□□ -1.11
DDX41-216ENST00000513562 SHOXO15266 292 aa8.08□□□□□ -1.12
DDX41-216ENST00000513562 OR2J3O76001 311 aa8.08□□□□□ -1.12
DDX41-216ENST00000513562 CTRB1P17538 263 aa8.08□□□□□ -1.12
DDX41-216ENST00000513562 NANOS2P60321 138 aaKnown RBP8.08□□□□□ -1.12
DDX41-216ENST00000513562 UBE2KP61086 200 aa8.08□□□□□ -1.12
DDX41-216ENST00000513562 RBMS2Q15434 407 aaKnown RBP8.08□□□□□ -1.12
DDX41-216ENST00000513562 TNXAQ16473 311 aa8.08□□□□□ -1.12
DDX41-216ENST00000513562 OR2G6Q5TZ20 316 aa8.08□□□□□ -1.12
DDX41-216ENST00000513562 GLT8D1Q68CQ7 371 aa8.08□□□□□ -1.12
DDX41-216ENST00000513562 CTRB2Q6GPI1 263 aa8.08□□□□□ -1.12
DDX41-216ENST00000513562 TTC9CQ8N5M4 171 aa8.08□□□□□ -1.12
DDX41-216ENST00000513562 OR2C3Q8N628 320 aa8.08□□□□□ -1.12
DDX41-216ENST00000513562 GVQW1Q8N7I0 195 aa8.08□□□□□ -1.12
DDX41-216ENST00000513562 NKAIN3Q8N8D7 197 aa8.08□□□□□ -1.12
DDX41-216ENST00000513562 TEX45Q8NA69 505 aa8.08□□□□□ -1.12
DDX41-216ENST00000513562 CCDC197Q8NCU1 140 aa8.08□□□□□ -1.12
DDX41-216ENST00000513562 RHOXF1Q8NHV9 184 aa8.08□□□□□ -1.12
DDX41-216ENST00000513562 C2CD4CQ8TF44 421 aa8.08□□□□□ -1.12
DDX41-216ENST00000513562 SLC7A6OSQ96CW6 309 aaPredicted RBP8.08□□□□□ -1.12
DDX41-216ENST00000513562 PGLYRP3Q96LB9 341 aa8.08□□□□□ -1.12
DDX41-216ENST00000513562 CCDC140Q96MF4 163 aa8.08□□□□□ -1.12
DDX41-216ENST00000513562 RIMS4Q9H426 269 aaPredicted RBP8.08□□□□□ -1.12
DDX41-216ENST00000513562 FGF20Q9NP95 211 aaPredicted RBP8.08□□□□□ -1.12
DDX41-216ENST00000513562 FBXL17Q9UF56 701 aa8.08□□□□□ -1.12
DDX41-216ENST00000513562 RPL36Q9Y3U8 105 aaKnown RBP8.08□□□□□ -1.12
DDX41-216ENST00000513562 ORC6Q9Y5N6 252 aa8.08□□□□□ -1.12
DDX41-216ENST00000513562 A0A1W2PPK0 400 aa8.07□□□□□ -1.12
DDX41-216ENST00000513562 ZNF320A2RRD8 509 aa8.07□□□□□ -1.12
DDX41-216ENST00000513562 LALBAP00709 142 aa8.07□□□□□ -1.12
DDX41-216ENST00000513562 IFNA4P05014 189 aa8.07□□□□□ -1.12
DDX41-216ENST00000513562 C8orf88P0DMB2 117 aa8.07□□□□□ -1.12
DDX41-216ENST00000513562 HTR2CP28335 458 aa8.07□□□□□ -1.12
DDX41-216ENST00000513562 ARL3P36405 182 aa8.07□□□□□ -1.12
DDX41-216ENST00000513562 ETV1P50549 477 aa8.07□□□□□ -1.12
DDX41-216ENST00000513562 RPS27AP62979 156 aaKnown RBP8.07□□□□□ -1.12
DDX41-216ENST00000513562 TAGLNQ01995 201 aaKnown RBP8.07□□□□□ -1.12
DDX41-216ENST00000513562 CBX3Q13185 183 aa8.07□□□□□ -1.12
DDX41-216ENST00000513562 ZIK1Q3SY52 487 aaPredicted RBP8.07□□□□□ -1.12
DDX41-216ENST00000513562 VMA21Q3ZAQ7 101 aa8.07□□□□□ -1.12
DDX41-216ENST00000513562 FAM106AQ4KMX7 169 aa8.07□□□□□ -1.12
DDX41-216ENST00000513562 OR4A47Q6IF82 309 aa8.07□□□□□ -1.12
DDX41-216ENST00000513562 TMPRSS11AQ6ZMR5 421 aa8.07□□□□□ -1.12
DDX41-216ENST00000513562 IDO2Q6ZQW0 420 aa8.07□□□□□ -1.12
DDX41-216ENST00000513562 RBPMS2Q6ZRY4 209 aaKnown RBP8.07□□□□□ -1.12
DDX41-216ENST00000513562 SLC38A6Q8IZM9 456 aa8.07□□□□□ -1.12
DDX41-216ENST00000513562 C11orf45Q8TAV5 145 aa8.07□□□□□ -1.12
DDX41-216ENST00000513562 MARC2Q969Z3 335 aa8.07□□□□□ -1.12
DDX41-216ENST00000513562 SLC29A1Q99808 456 aa8.07□□□□□ -1.12
DDX41-216ENST00000513562 SPIN2AQ99865 258 aa8.07□□□□□ -1.12
DDX41-216ENST00000513562 SPIN2BQ9BPZ2 258 aa8.07□□□□□ -1.12
DDX41-216ENST00000513562 C11orf68Q9H3H3 251 aaKnown RBP8.07□□□□□ -1.12
DDX41-216ENST00000513562 BABAM2Q9NXR7 383 aa8.07□□□□□ -1.12
DDX41-216ENST00000513562 FBXL7Q9UJT9 491 aa8.07□□□□□ -1.12
DDX41-216ENST00000513562 APLNQ9ULZ1 77 aa8.07□□□□□ -1.12
DDX41-216ENST00000513562 MGAT4AQ9UM21 535 aa8.07□□□□□ -1.12
DDX41-216ENST00000513562 IGKV1-6A0A0C4DH72 117 aa8.06□□□□□ -1.12
DDX41-216ENST00000513562 EI24O14681 340 aa8.06□□□□□ -1.12
DDX41-216ENST00000513562 SCTP09683 121 aa8.06□□□□□ -1.12
DDX41-216ENST00000513562 UBBP0CG47 229 aa8.06□□□□□ -1.12
DDX41-216ENST00000513562 RTL8BQ17RB0 113 aa8.06□□□□□ -1.12
DDX41-216ENST00000513562 ODF3L2Q3SX64 289 aa8.06□□□□□ -1.12
DDX41-216ENST00000513562 C10orf55Q5SWW7 151 aa8.06□□□□□ -1.12
DDX41-216ENST00000513562 OR10K2Q6IF99 312 aa8.06□□□□□ -1.12
DDX41-216ENST00000513562 ACOT12Q8WYK0 555 aa8.06□□□□□ -1.12
DDX41-216ENST00000513562 C5orf30Q96GV9 206 aa8.06□□□□□ -1.12
DDX41-216ENST00000513562 DERL3Q96Q80 235 aa8.06□□□□□ -1.12
DDX41-216ENST00000513562 SPAG8Q99932 426 aaPredicted RBP8.06□□□□□ -1.12
DDX41-216ENST00000513562 NICN1Q9BSH3 213 aa8.06□□□□□ -1.12
DDX41-216ENST00000513562 HDHD3Q9BSH5 251 aaPredicted RBP8.06□□□□□ -1.12
DDX41-216ENST00000513562 TM2D1Q9BX74 207 aa8.06□□□□□ -1.12
DDX41-216ENST00000513562 TMEM59Q9BXS4 323 aa8.06□□□□□ -1.12
DDX41-216ENST00000513562 MAP6D1Q9H9H5 199 aa8.06□□□□□ -1.12
DDX41-216ENST00000513562 SDHAF2Q9NX18 166 aa8.06□□□□□ -1.12
DDX41-216ENST00000513562 RDH8Q9NYR8 311 aa8.06□□□□□ -1.12
DDX41-216ENST00000513562 UBQLN2Q9UHD9 624 aa8.06□□□□□ -1.12
DDX41-216ENST00000513562 ZNF257Q9Y2Q1 563 aa8.06□□□□□ -1.12
DDX41-216ENST00000513562 HERC1Q15751 4861 aa8.05□□□□□ -1.12
DDX41-216ENST00000513562 PRSS29PA6NIE9 313 aa8.05□□□□□ -1.12
DDX41-216ENST00000513562 XRCC3O43542 346 aa8.05□□□□□ -1.12
DDX41-216ENST00000513562 IGHV3-23P01764 117 aa8.05□□□□□ -1.12
DDX41-216ENST00000513562 RRASP10301 218 aa8.05□□□□□ -1.12
DDX41-216ENST00000513562 RPL35AP18077 110 aaKnown RBP8.05□□□□□ -1.12
DDX41-216ENST00000513562 FCGR2BP31994 310 aaPredicted RBP8.05□□□□□ -1.12
DDX41-216ENST00000513562 CLEC19AQ6UXS0 136 aa8.05□□□□□ -1.12
DDX41-216ENST00000513562 UNQ9165/PRO28630Q6UXU0 137 aa8.05□□□□□ -1.12
DDX41-216ENST00000513562 C19orf35Q6ZS72 473 aa8.05□□□□□ -1.12
DDX41-216ENST00000513562 SLC25A42Q86VD7 318 aa8.05□□□□□ -1.12
DDX41-216ENST00000513562 APH1BQ8WW43 257 aa8.05□□□□□ -1.12
DDX41-216ENST00000513562 OR2D2Q9H210 308 aa8.05□□□□□ -1.12
DDX41-216ENST00000513562 C5orf66Q9H5L9 145 aa8.05□□□□□ -1.12
DDX41-216ENST00000513562 ZNF430Q9H8G1 570 aaPredicted RBP8.05□□□□□ -1.12
DDX41-216ENST00000513562 Q9N2K0 584 aa8.05□□□□□ -1.12
DDX41-216ENST00000513562 AK3Q9UIJ7 227 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms