RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 FAM103A1Q9BTL3 118 aaKnown RBP13.85□□□□□ -0.19
DDR1-272ENST00000513243 NECAP2Q9NVZ3 263 aa13.85□□□□□ -0.19
DDR1-272ENST00000513243 A3GALT2U3KPV4 340 aa13.85□□□□□ -0.19
DDR1-272ENST00000513243 SHOXO15266 292 aa13.84□□□□□ -0.19
DDR1-272ENST00000513243 SOX15O60248 233 aa13.84□□□□□ -0.19
DDR1-272ENST00000513243 HPGDSO60760 199 aa13.84□□□□□ -0.19
DDR1-272ENST00000513243 CRYZL1O95825 349 aa13.84□□□□□ -0.19
DDR1-272ENST00000513243 MYCNOSP40205 109 aa13.84□□□□□ -0.19
DDR1-272ENST00000513243 RPL30P62888 115 aaKnown RBP13.84□□□□□ -0.19
DDR1-272ENST00000513243 SSBP2P81877 361 aaPredicted RBP13.84□□□□□ -0.19
DDR1-272ENST00000513243 PJVKQ0ZLH3 352 aa13.84□□□□□ -0.19
DDR1-272ENST00000513243 CBX3Q13185 183 aa13.84□□□□□ -0.19
DDR1-272ENST00000513243 EIF4EBP1Q13541 118 aaPredicted RBP13.84□□□□□ -0.19
DDR1-272ENST00000513243 PDLIM3Q53GG5 364 aaPredicted RBP13.84□□□□□ -0.19
DDR1-272ENST00000513243 PPP1R27Q86WC6 154 aa13.84□□□□□ -0.19
DDR1-272ENST00000513243 ABHD5Q8WTS1 349 aa13.84□□□□□ -0.19
DDR1-272ENST00000513243 RAX2Q96IS3 184 aa13.84□□□□□ -0.19
DDR1-272ENST00000513243 DUX3Q96PT4 197 aa13.84□□□□□ -0.19
DDR1-272ENST00000513243 P2RX4Q99571 388 aa13.84□□□□□ -0.19
DDR1-272ENST00000513243 IFT46Q9NQC8 304 aa13.84□□□□□ -0.19
DDR1-272ENST00000513243 ANAPC10Q9UM13 185 aa13.84□□□□□ -0.19
DDR1-272ENST00000513243 A0A1W2PN81 502 aa13.83□□□□□ -0.2
DDR1-272ENST00000513243 CCL24O00175 119 aa13.83□□□□□ -0.2
DDR1-272ENST00000513243 ARPC1BO15143 372 aaKnown RBP13.83□□□□□ -0.2
DDR1-272ENST00000513243 PPYP01298 95 aa13.83□□□□□ -0.2
DDR1-272ENST00000513243 ELK1P19419 428 aa13.83□□□□□ -0.2
DDR1-272ENST00000513243 PRSS3P35030 304 aa13.83□□□□□ -0.2
DDR1-272ENST00000513243 CHRNA7P36544 502 aa13.83□□□□□ -0.2
DDR1-272ENST00000513243 TMEM267Q0VDI3 215 aaPredicted RBP13.83□□□□□ -0.2
DDR1-272ENST00000513243 FXYD3Q14802 87 aa13.83□□□□□ -0.2
DDR1-272ENST00000513243 CDK10Q15131 360 aa13.83□□□□□ -0.2
DDR1-272ENST00000513243 DEFB136Q30KP8 78 aa13.83□□□□□ -0.2
DDR1-272ENST00000513243 TMEM65Q6PI78 240 aa13.83□□□□□ -0.2
DDR1-272ENST00000513243 KCTD9Q7L273 389 aa13.83□□□□□ -0.2
DDR1-272ENST00000513243 ARPC1AQ92747 370 aa13.83□□□□□ -0.2
DDR1-272ENST00000513243 FOXA2Q9Y261 457 aaPredicted RBP13.83□□□□□ -0.2
DDR1-272ENST00000513243 MRPS7Q9Y2R9 242 aaKnown RBP13.83□□□□□ -0.2
DDR1-272ENST00000513243 SMIM31A0A1B0GVY4 71 aa13.82□□□□□ -0.2
DDR1-272ENST00000513243 FCGR3BO75015 233 aa13.82□□□□□ -0.2
DDR1-272ENST00000513243 ZNF182P17025 639 aaPredicted RBP13.82□□□□□ -0.2
DDR1-272ENST00000513243 RAB9AP51151 201 aa13.82□□□□□ -0.2
DDR1-272ENST00000513243 MRGPRG-AS1Q2M3A8 158 aa13.82□□□□□ -0.2
DDR1-272ENST00000513243 AKIRIN2Q53H80 203 aa13.82□□□□□ -0.2
DDR1-272ENST00000513243 OR2B11Q5JQS5 317 aa13.82□□□□□ -0.2
DDR1-272ENST00000513243 UNQ5815/PRO19632Q6UWF5 114 aa13.82□□□□□ -0.2
DDR1-272ENST00000513243 OVCH2Q7RTZ1 564 aa13.82□□□□□ -0.2
DDR1-272ENST00000513243 TCTEX1D1Q8N7M0 179 aa13.82□□□□□ -0.2
DDR1-272ENST00000513243 ZNF491Q8N8L2 437 aa13.82□□□□□ -0.2
DDR1-272ENST00000513243 LFNGQ8NES3 379 aa13.82□□□□□ -0.2
DDR1-272ENST00000513243 OSR1Q8TAX0 266 aaPredicted RBP13.82□□□□□ -0.2
DDR1-272ENST00000513243 SECTM1Q8WVN6 248 aa13.82□□□□□ -0.2
DDR1-272ENST00000513243 C4orf3Q8WVX3 66 aa13.82□□□□□ -0.2
DDR1-272ENST00000513243 GIMAP1Q8WWP7 306 aa13.82□□□□□ -0.2
DDR1-272ENST00000513243 GPHA2Q96T91 129 aa13.82□□□□□ -0.2
DDR1-272ENST00000513243 HSD17B10Q99714 261 aaKnown RBP13.82□□□□□ -0.2
DDR1-272ENST00000513243 CCL28Q9NRJ3 127 aa13.82□□□□□ -0.2
DDR1-272ENST00000513243 TAS2R8Q9NYW2 309 aa13.82□□□□□ -0.2
DDR1-272ENST00000513243 PRELID3BQ9Y3B1 194 aa13.82□□□□□ -0.2
DDR1-272ENST00000513243 NAT1P18440 290 aa13.81□□□□□ -0.2
DDR1-272ENST00000513243 BRWD1-AS2P59051 145 aa13.81□□□□□ -0.2
DDR1-272ENST00000513243 UBE2KP61086 200 aa13.81□□□□□ -0.2
DDR1-272ENST00000513243 GNB1P62873 340 aa13.81□□□□□ -0.2
DDR1-272ENST00000513243 ACTBL2Q562R1 376 aa13.81□□□□□ -0.2
DDR1-272ENST00000513243 MZT2AQ6P582 158 aa13.81□□□□□ -0.2
DDR1-272ENST00000513243 TEX45Q8NA69 505 aa13.81□□□□□ -0.2
DDR1-272ENST00000513243 GRPEL2Q8TAA5 225 aa13.81□□□□□ -0.2
DDR1-272ENST00000513243 GPX8Q8TED1 209 aa13.81□□□□□ -0.2
DDR1-272ENST00000513243 CASTOR1Q8WTX7 329 aa13.81□□□□□ -0.2
DDR1-272ENST00000513243 RCC1LQ96I51 464 aaKnown RBP13.81□□□□□ -0.2
DDR1-272ENST00000513243 UBE2E2Q96LR5 201 aa13.81□□□□□ -0.2
DDR1-272ENST00000513243 GNB4Q9HAV0 340 aa13.81□□□□□ -0.2
DDR1-272ENST00000513243 CNIH1O95406 144 aa13.8□□□□□ -0.2
DDR1-272ENST00000513243 PRB2P02812 416 aaPredicted RBP13.8□□□□□ -0.2
DDR1-272ENST00000513243 RFX2P48378 723 aa13.8□□□□□ -0.2
DDR1-272ENST00000513243 FXYD4P59646 89 aa13.8□□□□□ -0.2
DDR1-272ENST00000513243 SPCS2Q15005 226 aa13.8□□□□□ -0.2
DDR1-272ENST00000513243 MSMO1Q15800 293 aa13.8□□□□□ -0.2
DDR1-272ENST00000513243 VMA21Q3ZAQ7 101 aa13.8□□□□□ -0.2
DDR1-272ENST00000513243 ZNF66Q6ZN08 573 aa13.8□□□□□ -0.2
DDR1-272ENST00000513243 IDO2Q6ZQW0 420 aa13.8□□□□□ -0.2
DDR1-272ENST00000513243 SNX29P2Q8IUI4 249 aa13.8□□□□□ -0.2
DDR1-272ENST00000513243 CLVS1Q8IUQ0 354 aaPredicted RBP13.8□□□□□ -0.2
DDR1-272ENST00000513243 LYSMD2Q8IV50 215 aa13.8□□□□□ -0.2
DDR1-272ENST00000513243 MFSD4AQ8N468 514 aa13.8□□□□□ -0.2
DDR1-272ENST00000513243 TCTEX1D2Q8WW35 142 aa13.8□□□□□ -0.2
DDR1-272ENST00000513243 AP3S1Q92572 193 aa13.8□□□□□ -0.2
DDR1-272ENST00000513243 DCUN1D5Q9BTE7 237 aa13.8□□□□□ -0.2
DDR1-272ENST00000513243 SLC5A7Q9GZV3 580 aa13.8□□□□□ -0.2
DDR1-272ENST00000513243 EHFQ9NZC4 300 aa13.8□□□□□ -0.2
DDR1-272ENST00000513243 VSIG4Q9Y279 399 aa13.8□□□□□ -0.2
DDR1-272ENST00000513243 TNFSF12O43508 249 aa13.79□□□□□ -0.2
DDR1-272ENST00000513243 DUS4LO95620 317 aaKnown RBP13.79□□□□□ -0.2
DDR1-272ENST00000513243 PMP2P02689 132 aa13.79□□□□□ -0.2
DDR1-272ENST00000513243 DYRK1AQ13627 763 aa13.79□□□□□ -0.2
DDR1-272ENST00000513243 PRSS8Q16651 343 aa13.79□□□□□ -0.2
DDR1-272ENST00000513243 FOXB2Q5VYV0 432 aa13.79□□□□□ -0.2
DDR1-272ENST00000513243 DHRS11Q6UWP2 260 aa13.79□□□□□ -0.2
DDR1-272ENST00000513243 OR5M8Q8NGP6 311 aa13.79□□□□□ -0.2
DDR1-272ENST00000513243 OR5B12Q96R08 314 aa13.79□□□□□ -0.2
DDR1-272ENST00000513243 FAM25AB3EWG3 89 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms