RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 FBXO7Q9Y3I1 522 aa12.47□□□□□ -0.41
DDX41-214ENST00000512334 RGS5O15539 181 aa12.46□□□□□ -0.41
DDX41-214ENST00000512334 IGLV2-14P01704 120 aa12.46□□□□□ -0.41
DDX41-214ENST00000512334 IGLV2-23P01705 113 aa12.46□□□□□ -0.41
DDX41-214ENST00000512334 IGHG4P01861 327 aa12.46□□□□□ -0.41
DDX41-214ENST00000512334 RFX2P48378 723 aa12.46□□□□□ -0.41
DDX41-214ENST00000512334 TMBIM6P55061 237 aa12.46□□□□□ -0.41
DDX41-214ENST00000512334 TAS2R46P59540 309 aa12.46□□□□□ -0.41
DDX41-214ENST00000512334 HERV-K104P61576 105 aa12.46□□□□□ -0.41
DDX41-214ENST00000512334 GNB1P62873 340 aa12.46□□□□□ -0.41
DDX41-214ENST00000512334 VMA21Q3ZAQ7 101 aa12.46□□□□□ -0.41
DDX41-214ENST00000512334 TMEM177Q53S58 311 aa12.46□□□□□ -0.41
DDX41-214ENST00000512334 TMEM65Q6PI78 240 aa12.46□□□□□ -0.41
DDX41-214ENST00000512334 ZNF562Q6V9R5 426 aa12.46□□□□□ -0.41
DDX41-214ENST00000512334 PPP1R27Q86WC6 154 aa12.46□□□□□ -0.41
DDX41-214ENST00000512334 TMEM17Q86X19 198 aa12.46□□□□□ -0.41
DDX41-214ENST00000512334 ZNF695Q8IW36 515 aa12.46□□□□□ -0.41
DDX41-214ENST00000512334 GIMAP1Q8WWP7 306 aa12.46□□□□□ -0.41
DDX41-214ENST00000512334 HSD17B10Q99714 261 aaKnown RBP12.46□□□□□ -0.41
DDX41-214ENST00000512334 FAM103A1Q9BTL3 118 aaKnown RBP12.46□□□□□ -0.41
DDX41-214ENST00000512334 SLC5A7Q9GZV3 580 aa12.46□□□□□ -0.41
DDX41-214ENST00000512334 CCL28Q9NRJ3 127 aa12.46□□□□□ -0.41
DDX41-214ENST00000512334 EXTL2Q9UBQ6 330 aa12.46□□□□□ -0.41
DDX41-214ENST00000512334 ANAPC10Q9UM13 185 aa12.46□□□□□ -0.41
DDX41-214ENST00000512334 PLXNB1O43157 2135 aa12.46□□□□□ -0.42
DDX41-214ENST00000512334 A0A1W2PN81 502 aa12.45□□□□□ -0.42
DDX41-214ENST00000512334 SRRM4A7MD48 611 aaKnown RBP12.45□□□□□ -0.42
DDX41-214ENST00000512334 TNFSF12O43508 249 aa12.45□□□□□ -0.42
DDX41-214ENST00000512334 CNIH1O95406 144 aa12.45□□□□□ -0.42
DDX41-214ENST00000512334 HLA-DMAP28067 261 aa12.45□□□□□ -0.42
DDX41-214ENST00000512334 PPIFP30405 207 aaKnown RBP12.45□□□□□ -0.42
DDX41-214ENST00000512334 CHRNA7P36544 502 aa12.45□□□□□ -0.42
DDX41-214ENST00000512334 RPL30P62888 115 aaKnown RBP12.45□□□□□ -0.42
DDX41-214ENST00000512334 DEFA6Q01524 100 aa12.45□□□□□ -0.42
DDX41-214ENST00000512334 TMEM267Q0VDI3 215 aaPredicted RBP12.45□□□□□ -0.42
DDX41-214ENST00000512334 FXYD3Q14802 87 aa12.45□□□□□ -0.42
DDX41-214ENST00000512334 RNASE12Q5GAN4 147 aaKnown RBP12.45□□□□□ -0.42
DDX41-214ENST00000512334 GRPEL2Q8TAA5 225 aa12.45□□□□□ -0.42
DDX41-214ENST00000512334 GPX8Q8TED1 209 aa12.45□□□□□ -0.42
DDX41-214ENST00000512334 ARPC1AQ92747 370 aa12.45□□□□□ -0.42
DDX41-214ENST00000512334 GPHA2Q96T91 129 aa12.45□□□□□ -0.42
DDX41-214ENST00000512334 BCL7BQ9BQE9 202 aa12.45□□□□□ -0.42
DDX41-214ENST00000512334 SCPEP1Q9HB40 452 aa12.45□□□□□ -0.42
DDX41-214ENST00000512334 G3V4G9 280 aa12.44□□□□□ -0.42
DDX41-214ENST00000512334 NAT1P18440 290 aa12.44□□□□□ -0.42
DDX41-214ENST00000512334 PSMB8P28062 276 aa12.44□□□□□ -0.42
DDX41-214ENST00000512334 SLC6A1P30531 599 aa12.44□□□□□ -0.42
DDX41-214ENST00000512334 HRH1P35367 487 aa12.44□□□□□ -0.42
DDX41-214ENST00000512334 PJVKQ0ZLH3 352 aa12.44□□□□□ -0.42
DDX41-214ENST00000512334 DYRK1AQ13627 763 aa12.44□□□□□ -0.42
DDX41-214ENST00000512334 UNQ5815/PRO19632Q6UWF5 114 aa12.44□□□□□ -0.42
DDX41-214ENST00000512334 ZNF66Q6ZN08 573 aa12.44□□□□□ -0.42
DDX41-214ENST00000512334 OVCH2Q7RTZ1 564 aa12.44□□□□□ -0.42
DDX41-214ENST00000512334 MFSD4AQ8N468 514 aa12.44□□□□□ -0.42
DDX41-214ENST00000512334 RNF152Q8N8N0 203 aa12.44□□□□□ -0.42
DDX41-214ENST00000512334 OSR1Q8TAX0 266 aaPredicted RBP12.44□□□□□ -0.42
DDX41-214ENST00000512334 ZNF2Q9BSG1 426 aaPredicted RBP12.44□□□□□ -0.42
DDX41-214ENST00000512334 ADAM30Q9UKF2 790 aa12.44□□□□□ -0.42
DDX41-214ENST00000512334 FOXA2Q9Y261 457 aaPredicted RBP12.44□□□□□ -0.42
DDX41-214ENST00000512334 CCDC160A6NGH7 325 aa12.43□□□□□ -0.42
DDX41-214ENST00000512334 SULT1C2O00338 296 aa12.43□□□□□ -0.42
DDX41-214ENST00000512334 CRYGBP07316 175 aa12.43□□□□□ -0.42
DDX41-214ENST00000512334 EGR2P11161 476 aaPredicted RBP12.43□□□□□ -0.42
DDX41-214ENST00000512334 RCVRNP35243 200 aa12.43□□□□□ -0.42
DDX41-214ENST00000512334 CDX1P47902 265 aaPredicted RBP12.43□□□□□ -0.42
DDX41-214ENST00000512334 CRIP2P52943 208 aaPredicted RBP12.43□□□□□ -0.42
DDX41-214ENST00000512334 UBE2KP61086 200 aa12.43□□□□□ -0.42
DDX41-214ENST00000512334 ACTBL2Q562R1 376 aa12.43□□□□□ -0.42
DDX41-214ENST00000512334 IDO2Q6ZQW0 420 aa12.43□□□□□ -0.42
DDX41-214ENST00000512334 TCTEX1D1Q8N7M0 179 aa12.43□□□□□ -0.42
DDX41-214ENST00000512334 MINDY2Q8NBR6 621 aa12.43□□□□□ -0.42
DDX41-214ENST00000512334 ZBTB34Q8NCN2 500 aa12.43□□□□□ -0.42
DDX41-214ENST00000512334 LFNGQ8NES3 379 aa12.43□□□□□ -0.42
DDX41-214ENST00000512334 OR4S2Q8NH73 311 aa12.43□□□□□ -0.42
DDX41-214ENST00000512334 DUX3Q96PT4 197 aa12.43□□□□□ -0.42
DDX41-214ENST00000512334 KLK15Q9H2R5 256 aa12.43□□□□□ -0.42
DDX41-214ENST00000512334 CCDC59Q9P031 241 aaKnown RBP12.43□□□□□ -0.42
DDX41-214ENST00000512334 NUBP2Q9Y5Y2 271 aa12.43□□□□□ -0.42
DDX41-214ENST00000512334 H3BMQ9 156 aa12.42□□□□□ -0.42
DDX41-214ENST00000512334 CTDSP2O14595 271 aa12.42□□□□□ -0.42
DDX41-214ENST00000512334 ARPC1BO15143 372 aaKnown RBP12.42□□□□□ -0.42
DDX41-214ENST00000512334 IGLV1-40P01703 118 aa12.42□□□□□ -0.42
DDX41-214ENST00000512334 SAA1P0DJI8 122 aaPredicted RBP12.42□□□□□ -0.42
DDX41-214ENST00000512334 TSPAN5P62079 268 aa12.42□□□□□ -0.42
DDX41-214ENST00000512334 CATR1Q13166 79 aa12.42□□□□□ -0.42
DDX41-214ENST00000512334 EIF4EBP1Q13541 118 aaPredicted RBP12.42□□□□□ -0.42
DDX41-214ENST00000512334 MSMO1Q15800 293 aa12.42□□□□□ -0.42
DDX41-214ENST00000512334 AKIRIN2Q53H80 203 aa12.42□□□□□ -0.42
DDX41-214ENST00000512334 OXLD1Q5BKU9 147 aa12.42□□□□□ -0.42
DDX41-214ENST00000512334 ETV3LQ6ZN32 361 aa12.42□□□□□ -0.42
DDX41-214ENST00000512334 ZNF818PQ6ZRF7 136 aa12.42□□□□□ -0.42
DDX41-214ENST00000512334 LYSMD2Q8IV50 215 aa12.42□□□□□ -0.42
DDX41-214ENST00000512334 LAX1Q8IWV1 398 aa12.42□□□□□ -0.42
DDX41-214ENST00000512334 TEX45Q8NA69 505 aa12.42□□□□□ -0.42
DDX41-214ENST00000512334 DYNC2LI1Q8TCX1 351 aa12.42□□□□□ -0.42
DDX41-214ENST00000512334 CASTOR1Q8WTX7 329 aa12.42□□□□□ -0.42
DDX41-214ENST00000512334 ISOC1Q96CN7 298 aa12.42□□□□□ -0.42
DDX41-214ENST00000512334 PHB2Q99623 299 aa12.42□□□□□ -0.42
DDX41-214ENST00000512334 MIXL1Q9H2W2 232 aa12.42□□□□□ -0.42
DDX41-214ENST00000512334 CCL24O00175 119 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms