RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 BORCS5Q969J3 196 aa7.57□□□□□ -1.2
SNF8-211ENST00000512243 ST6GALNAC6Q969X2 333 aa7.57□□□□□ -1.2
SNF8-211ENST00000512243 TSC22D3Q99576 134 aa7.57□□□□□ -1.2
SNF8-211ENST00000512243 SSX3Q99909 188 aa7.57□□□□□ -1.2
SNF8-211ENST00000512243 PRRT1Q99946 306 aa7.57□□□□□ -1.2
SNF8-211ENST00000512243 DPAGT1Q9H3H5 408 aa7.57□□□□□ -1.2
SNF8-211ENST00000512243 ZMAT4Q9H898 229 aa7.57□□□□□ -1.2
SNF8-211ENST00000512243 HRASLSQ9HDD0 168 aa7.57□□□□□ -1.2
SNF8-211ENST00000512243 SDHAF2Q9NX18 166 aa7.57□□□□□ -1.2
SNF8-211ENST00000512243 SCP2D1Q9UJQ7 156 aa7.57□□□□□ -1.2
SNF8-211ENST00000512243 C2CD3Q4AC94 2353 aa7.57□□□□□ -1.2
SNF8-211ENST00000512243 CUBNO60494 3623 aa7.57□□□□□ -1.2
SNF8-211ENST00000512243 LINC00854A0A1B0GVQ3 168 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 NAP1L6A6NFF2 107 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 OR5H14A6NHG9 310 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 CENPXA8MT69 81 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 VGLL3A8MV65 326 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 H3BUX3 64 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 TIMM23O14925 209 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 TCF21O43680 179 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 UPK1BO75841 260 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 IFNA2P01563 188 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 APOA2P02652 100 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 ZNF735P0CB33 412 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 S100GP29377 79 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 DYNLT3P51808 116 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 MSMO1Q15800 293 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 LPCAT3Q6P1A2 487 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 LHFPL1Q86WI0 220 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 LURAP1LQ8IV03 231 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 SLC38A6Q8IZM9 456 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 TMEM86BQ8N661 226 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 DRAM1Q8N682 238 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 ZBTB34Q8NCN2 500 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 OR51S1Q8NGJ8 323 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 C5orf30Q96GV9 206 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 ADTRPQ96IZ2 230 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 NABP2Q9BQ15 211 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 ZNF251Q9BRH9 671 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 C7orf50Q9BRJ6 194 aaKnown RBP7.56□□□□□ -1.2
SNF8-211ENST00000512243 PRDM13Q9H4Q3 707 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 SLC2A8Q9NY64 477 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 GAB2Q9UQC2 676 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 POMT1Q9Y6A1 747 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 NF1P21359 2839 aa7.56□□□□□ -1.2
SNF8-211ENST00000512243 A0A0A6YYJ9 748 aa7.55□□□□□ -1.2
SNF8-211ENST00000512243 IGHV3-72A0A0B4J1Y9 119 aa7.55□□□□□ -1.2
SNF8-211ENST00000512243 KRTAP23-1A1A580 65 aa7.55□□□□□ -1.2
SNF8-211ENST00000512243 DNAJC9-AS1A6NH13 148 aa7.55□□□□□ -1.2
SNF8-211ENST00000512243 GPR31O00270 319 aa7.55□□□□□ -1.2
SNF8-211ENST00000512243 HOXA3O43365 443 aaPredicted RBP7.55□□□□□ -1.2
SNF8-211ENST00000512243 IGHV4-59P01825 116 aa7.55□□□□□ -1.2
SNF8-211ENST00000512243 CD1BP29016 333 aa7.55□□□□□ -1.2
SNF8-211ENST00000512243 THBS3P49746 956 aa7.55□□□□□ -1.2
SNF8-211ENST00000512243 RAB13P51153 203 aa7.55□□□□□ -1.2
SNF8-211ENST00000512243 UCP3P55916 312 aa7.55□□□□□ -1.2
SNF8-211ENST00000512243 HILS1P60008 231 aa7.55□□□□□ -1.2
SNF8-211ENST00000512243 CBX3Q13185 183 aa7.55□□□□□ -1.2
SNF8-211ENST00000512243 HES1Q14469 280 aa7.55□□□□□ -1.2
SNF8-211ENST00000512243 AADACL3Q5VUY0 350 aa7.55□□□□□ -1.2
SNF8-211ENST00000512243 IDO2Q6ZQW0 420 aa7.55□□□□□ -1.2
SNF8-211ENST00000512243 ZNF818PQ6ZRF7 136 aa7.55□□□□□ -1.2
SNF8-211ENST00000512243 KCTD9Q7L273 389 aa7.55□□□□□ -1.2
SNF8-211ENST00000512243 CMTM1Q8IZ96 169 aa7.55□□□□□ -1.2
SNF8-211ENST00000512243 TERB2Q8NHR7 220 aa7.55□□□□□ -1.2
SNF8-211ENST00000512243 ZFAND1Q8TCF1 268 aa7.55□□□□□ -1.2
SNF8-211ENST00000512243 CAPSLQ8WWF8 208 aa7.55□□□□□ -1.2
SNF8-211ENST00000512243 AKR1E2Q96JD6 320 aa7.55□□□□□ -1.2
SNF8-211ENST00000512243 HSD17B10Q99714 261 aaKnown RBP7.55□□□□□ -1.2
SNF8-211ENST00000512243 CCL28Q9NRJ3 127 aa7.55□□□□□ -1.2
SNF8-211ENST00000512243 TNFRSF19Q9NS68 423 aa7.55□□□□□ -1.2
SNF8-211ENST00000512243 PITPNC1Q9UKF7 332 aa7.55□□□□□ -1.2
SNF8-211ENST00000512243 RNF212BA8MTL3 300 aa7.54□□□□□ -1.2
SNF8-211ENST00000512243 H0YJW9 148 aa7.54□□□□□ -1.2
SNF8-211ENST00000512243 TNFSF12O43508 249 aa7.54□□□□□ -1.2
SNF8-211ENST00000512243 VENTXO95231 258 aa7.54□□□□□ -1.2
SNF8-211ENST00000512243 IGKV1D-33P01593 117 aa7.54□□□□□ -1.2
SNF8-211ENST00000512243 IGKV1-33P01594 117 aa7.54□□□□□ -1.2
SNF8-211ENST00000512243 SNRNP70P08621 437 aaKnown RBP7.54□□□□□ -1.2
SNF8-211ENST00000512243 FAM106CPP0CH98 169 aa7.54□□□□□ -1.2
SNF8-211ENST00000512243 CT45A6P0DMU7 189 aa7.54□□□□□ -1.2
SNF8-211ENST00000512243 CT45A5P0DMU8 189 aa7.54□□□□□ -1.2
SNF8-211ENST00000512243 CT45A7P0DMV0 189 aa7.54□□□□□ -1.2
SNF8-211ENST00000512243 VSIG10L2P0DP72 767 aa7.54□□□□□ -1.2
SNF8-211ENST00000512243 DUTP33316 252 aaKnown RBP7.54□□□□□ -1.2
SNF8-211ENST00000512243 IER3P46695 156 aa7.54□□□□□ -1.2
SNF8-211ENST00000512243 CATR1Q13166 79 aa7.54□□□□□ -1.2
SNF8-211ENST00000512243 HABP2Q14520 560 aaPredicted RBP7.54□□□□□ -1.2
SNF8-211ENST00000512243 LY6EQ16553 131 aa7.54□□□□□ -1.2
SNF8-211ENST00000512243 RTL8BQ17RB0 113 aa7.54□□□□□ -1.2
SNF8-211ENST00000512243 GAGE13Q4V321 117 aa7.54□□□□□ -1.2
SNF8-211ENST00000512243 ABCA11PQ4W5N1 156 aa7.54□□□□□ -1.2
SNF8-211ENST00000512243 PHLDA2Q53GA4 152 aa7.54□□□□□ -1.2
SNF8-211ENST00000512243 GLDNQ6ZMI3 551 aaPredicted RBP7.54□□□□□ -1.2
SNF8-211ENST00000512243 ZNF66Q6ZN08 573 aa7.54□□□□□ -1.2
SNF8-211ENST00000512243 CCDC71LQ8N9Z2 235 aa7.54□□□□□ -1.2
SNF8-211ENST00000512243 DRAXINQ8NBI3 349 aaPredicted RBP7.54□□□□□ -1.2
SNF8-211ENST00000512243 OR13C8Q8NGS7 320 aa7.54□□□□□ -1.2
SNF8-211ENST00000512243 MARCH1Q8TCQ1 289 aa7.54□□□□□ -1.2
SNF8-211ENST00000512243 TCTEX1D2Q8WW35 142 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms